Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00089
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    26   0.36 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.63 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.4  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    22   5.9  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 477 SNHAPRSGHIVN-LCDILHHTNGRIVYNDLNSIT-PEQYFKQVTRRVAEIKAVS 632
           +NH      IV  + D+L  T  + VYNDL  +   E+  K+V R    +  +S
Sbjct: 13  ANHPTVQEEIVQEMKDVLGDTKKKPVYNDLQELKYMERVIKEVLRLYPSVHYIS 66


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 497 WTYCQLVRHSAPYKWSHCVQRFE 565
           WT+C +V H    KW + + +FE
Sbjct: 396 WTFCHMVSH----KWLNYINQFE 414


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +1

Query: 220 HHSRRLQKYYDVVKSHLLTKDLKSKVITASGFPQGERKISFPYY 351
           HH+    +  D      L+ D   K  T  GFP+ +  +  P++
Sbjct: 377 HHANLYSRPGDSGLDLFLSVDYAVKFWTKKGFPKSKIVLGVPFF 420


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 370 LNNMELIKRVYLNATNGHRTQEVTKEEFLHSAQMMSQ 480
           + + + I R+Y  AT  H T E    EFL S   + Q
Sbjct: 293 IESQDAITRIYAIATMWHETPE-EMMEFLKSVFRLDQ 328


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 507 VNLCDILHHTNGRIVYNDLN 566
           ++LCD+ + T G + + +LN
Sbjct: 313 IHLCDVCYSTIGTVSWCELN 332


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 101 FGKDKKRLVTYPEFSQ 148
           FGK+KK +V+Y +  +
Sbjct: 30  FGKEKKPIVSYSDLQE 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,288
Number of Sequences: 336
Number of extensions: 3867
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)