Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00088
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 72 5e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 50 1e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 9e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 43 3e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 41 8e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 41 8e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 41 8e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 41 0.001
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 41 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 41 0.001
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 41 0.001
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 41 0.001
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.001
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 40 0.002
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 39 0.004
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 38 0.006
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.007
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 36 0.029
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 36 0.029
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.039
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.039
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.090
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 34 0.090
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 32 0.48
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.63
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 1.5
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 1.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 1.5
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 1.5
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 30 1.5
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 30 1.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 30 1.9
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.6
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.4
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 28 5.9
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 5.9
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/64 (60%), Positives = 51/64 (79%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
KTGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 174 KTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKM 233
Query: 712 TCVF 723
TC+F
Sbjct: 234 TCLF 237
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Frame = +3
Query: 255 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYV 434
W + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P +
Sbjct: 82 WSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQI 141
Query: 435 QQGVKTMGYKEPTPIQAQGWPIAMSER 515
+ + +++PT IQ+ WPIAMS R
Sbjct: 142 HE-LLYGKFQKPTVIQSISWPIAMSGR 167
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
KTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 310 KTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
Query: 712 TCVF 723
C +
Sbjct: 370 ICAY 373
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 443
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 444 VKTMGYKEPTPIQAQGWPIAMSER 515
++ Y++PTPIQA P A+S R
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 711
KTGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 349 KTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKV 408
Query: 712 TCVF 723
C +
Sbjct: 409 ACTY 412
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 264 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 440
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 441 GVKTMGYKEPTPIQAQGWPIAMSER 515
+K Y +PT IQAQ P MS R
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +3
Query: 345 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + R
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 699
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 346 ETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLL 405
Query: 700 YVRNTCV 720
++ V
Sbjct: 406 GIKTVSV 412
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Frame = +1
Query: 529 TKTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 690
++TGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 691 HTSYVRNTCVF 723
+ Y ++ C++
Sbjct: 188 YNGY-KSVCLY 197
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMS 509
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +S
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLS 120
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Frame = +1
Query: 502 LCRKEFSWRTKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ +TGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 652 LAQQIQQVAADFGHTSYVRNTCVF 723
LA QI + A F + S ++ ++
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILY 257
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Frame = +1
Query: 502 LCRKEFSWRTKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ +TGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 652 LAQQIQQVAADFGHTSYVRNTCVF 723
LA QI + A F + S ++ ++
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILY 241
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Frame = +1
Query: 502 LCRKEFSWRTKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRE 651
L ++ +TGSGKT A++LP I HI +PP RR P ALVL+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 652 LAQQIQQVAADFGHTSYVRNTCVF 723
LA QI + A F + S ++ ++
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILY 238
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 339 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ R
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 666
TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 236 TGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+ +T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 511 KEFSWRTKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 675
K R +TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 529 TKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 708
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 709 NTCV 720
C+
Sbjct: 124 CACL 127
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +1
Query: 529 TKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 708
++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 709 NTCV 720
C+
Sbjct: 124 CACL 127
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 684
KTGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 113 KTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 511 KEFSWRTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
K+ + ++G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +1
Query: 511 KEFSWRTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
K+ + ++G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 67 KDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 363 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
V +G +V PI F + + +++++ +KT GY PTP+Q P R
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVA 678
+TGSGKT A+++P + I P R+ P ALVL+PTREL+ QI +
Sbjct: 211 QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNES 270
Query: 679 ADFGHTSYVRNTCVF 723
F + + + + ++
Sbjct: 271 RKFAYRTPITSALLY 285
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 687
TGSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 699
+TGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 699
+TGSGKT A++LP + + + + G +G P ++L PTRELA QI F + S
Sbjct: 343 QTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F +++ P +++ V+ GY TPIQ P+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPL 331
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 393 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 500
P + F EAN + +Q+ V GY + TPIQ P+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 693
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 684
R K G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +1
Query: 508 RKEFSWRTKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 26 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 85
Query: 670 Q 672
+
Sbjct: 86 K 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +1
Query: 508 RKEFSWRTKTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQ 669
R++ +TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 193 RQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIM 252
Query: 670 Q 672
+
Sbjct: 253 K 253
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 423 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSER 515
P+ V + ++ MG+ EPT IQ+ P A+ +R
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDR 193
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 675
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 405 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 509
FE+ N + + GY +PTPIQ P+A++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALT 184
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ ++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 706 R-NTCV 720
+ + C+
Sbjct: 124 QCHACI 129
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 705
+ ++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G V
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNV 123
Query: 706 R-NTCV 720
+ + C+
Sbjct: 124 QCHACI 129
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 663
TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 663
TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 89 ETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.090
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 535 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 663
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 532 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 663
KTGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 121 KTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1
Query: 478 FKLKAGR*LCRKEFSWRTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA 657
F++++ L ++ + TGSGKT+ Y+LP + + ++P A++L P + L
Sbjct: 146 FEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLV 201
Query: 658 QQI 666
QI
Sbjct: 202 AQI 204
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ ++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ ++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 690
+ ++G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 467 TDAHSSSRLADSYVGKNLVGVPKRVPAKRWP 559
TDA R+A S++G+ L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 535 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 666
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 99 IPITRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 99 IPITRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706
Query: 99 IPITRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = -3
Query: 279 KVGVKQNPIWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAI 100
++G K ++ +H + + P + + KSI + E S G T ++
Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698
Query: 99 IPITRHDYFSDLVEDVYLNYGFFLTQ 22
P+TRH+ + + E +Y G+ L Q
Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +3
Query: 303 HPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 482
H + R+ +V ++ N+ + T+ +H + +E A F + +K + I
Sbjct: 213 HNKEISRTDKKVMKFINQVKSTLGTALIHLKLNIYEFAAFKSFCIWNIKFHKTSQTMRIV 272
Query: 483 AQGWPIAMSERI*LAYQN 536
AQG +A+S + + Y+N
Sbjct: 273 AQGHYVAVSSALRVYYKN 290
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 21 PASERIHSLNKHLQLNPKNNHVW 89
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = -1
Query: 512 FRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 336
+R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 28 YRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 107 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 223
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 162 RRIIAEFVASSKFGTTVSTAIIPI 91
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 162 RRIIAEFVASSKFGTTVSTAIIPI 91
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 535 TGSGKTLAYILPAIVH 582
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+ K+G+GKTL + + A+ ++++ R +++ PTRE++ QI++
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +1
Query: 526 RTKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 672
+ K+G+GKTL + + A+ ++++ R +++ PTRE++ QI++
Sbjct: 65 QAKSGTGKTLVFSVLAVENLDS-----RSSHIQKVIVTPTREISVQIKE 108
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = -1
Query: 512 FRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFDF 333
FR S+RP + R+ F+ L L+H+ I + V+ + + + F++I+ +
Sbjct: 223 FRKSFRPKRTARQRQIFLQAFLLCLIHLSASILY--VVMQFIEVPK------FLTIISQY 274
Query: 332 IW*SFENCRMWIIKVF 285
+W + C + I +F
Sbjct: 275 LWQLAQGCPVIIYLIF 290
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 300 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 458
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,405
Number of Sequences: 27780
Number of extensions: 367468
Number of successful extensions: 1179
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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