Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00086
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 125 4e-29
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 125 4e-29
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 116 2e-26
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 112 3e-25
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 112 3e-25
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 105 4e-23
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 79 4e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 71 1e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 1e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 1e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 71 1e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 1e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 70 1e-12
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 69 4e-12
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 68 8e-12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 68 8e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 3e-11
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 65 4e-11
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 65 6e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 64 7e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 62 3e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 62 3e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 61 9e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 60 2e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 59 4e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 54 1e-07
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 54 1e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 54 1e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 54 1e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 48 5e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 42 4e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 42 4e-04
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 40 0.002
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 34 0.089
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 34 0.089
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 34 0.12
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 34 0.12
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 33 0.16
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 33 0.16
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 33 0.27
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 31 1.1
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 31 1.1
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 29 2.5
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 29 4.4
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 4.4
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 29 4.4
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 125 bits (301), Expect = 4e-29
Identities = 59/75 (78%), Positives = 65/75 (86%)
Frame = -3
Query: 510 QVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 331
+VD LTE M FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS
Sbjct: 280 KVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSL 339
Query: 330 VINYDLPSNRENYIH 286
VINYDLPSNRENYIH
Sbjct: 340 VINYDLPSNRENYIH 354
Score = 110 bits (264), Expect = 1e-24
Identities = 46/72 (63%), Positives = 63/72 (87%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SATMP +VL+V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++
Sbjct: 209 SATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNV 268
Query: 542 AQAVIFCNTRRR 507
QAVIFCNTRR+
Sbjct: 269 TQAVIFCNTRRK 280
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 125 bits (301), Expect = 4e-29
Identities = 59/75 (78%), Positives = 65/75 (86%)
Frame = -3
Query: 510 QVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 331
+VD LTE M FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS
Sbjct: 280 KVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSL 339
Query: 330 VINYDLPSNRENYIH 286
VINYDLPSNRENYIH
Sbjct: 340 VINYDLPSNRENYIH 354
Score = 110 bits (264), Expect = 1e-24
Identities = 46/72 (63%), Positives = 63/72 (87%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SATMP +VL+V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++
Sbjct: 209 SATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNV 268
Query: 542 AQAVIFCNTRRR 507
QAVIFCNTRR+
Sbjct: 269 TQAVIFCNTRRK 280
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 116 bits (278), Expect = 2e-26
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = -3
Query: 471 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENY 65
Query: 291 IH 286
IH
Sbjct: 66 IH 67
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFVTE D R LK+IE +Y T I EMP +A+LI
Sbjct: 79 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 115
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 112 bits (269), Expect = 3e-25
Identities = 47/72 (65%), Positives = 64/72 (88%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I
Sbjct: 206 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTI 265
Query: 542 AQAVIFCNTRRR 507
QAV+FCNTRR+
Sbjct: 266 TQAVLFCNTRRK 277
Score = 111 bits (268), Expect = 4e-25
Identities = 48/75 (64%), Positives = 65/75 (86%)
Frame = -3
Query: 510 QVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 331
+VDWLT+ M +FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS
Sbjct: 277 KVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSL 336
Query: 330 VINYDLPSNRENYIH 286
VINYDLP+NRE YIH
Sbjct: 337 VINYDLPNNRELYIH 351
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 363 GVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 112 bits (269), Expect = 3e-25
Identities = 47/72 (65%), Positives = 64/72 (88%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT+P ++LE++ FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I
Sbjct: 206 SATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTI 265
Query: 542 AQAVIFCNTRRR 507
QAV+FCNTRR+
Sbjct: 266 TQAVLFCNTRRK 277
Score = 111 bits (268), Expect = 4e-25
Identities = 48/75 (64%), Positives = 65/75 (86%)
Frame = -3
Query: 510 QVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 331
+VDWLT+ M +FTVS+MHGDM+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS
Sbjct: 277 KVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSL 336
Query: 330 VINYDLPSNRENYIH 286
VINYDLP+NRE YIH
Sbjct: 337 VINYDLPNNRELYIH 351
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = -2
Query: 253 GIAINFVTEADRRALKDIEDFYHTSIVEMPSDVANLI 143
G+AINFV + D R L+DIE +Y T I EMP ++A++I
Sbjct: 363 GVAINFVKQDDVRILRDIEQYYSTQIDEMPMNIADII 399
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 105 bits (251), Expect = 4e-23
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SATMP +VL+V+ FMRDP+RILV+K+ELTLEGI+QFYI ++ +EWK LCDL T
Sbjct: 168 SATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRE 227
Query: 542 AQAVIFCNTRRR 507
QA+IFCNTRRR
Sbjct: 228 TQALIFCNTRRR 239
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 52/74 (70%)
Frame = -3
Query: 510 QVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSC 331
+V LTE + VS HG+M+ ERE +++ F + ++RVL+TTDL+ARG+++++ S
Sbjct: 239 RVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SL 297
Query: 330 VINYDLPSNRENYI 289
+INYD+ N ENY+
Sbjct: 298 IINYDVSGNMENYM 311
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 78.6 bits (185), Expect = 4e-15
Identities = 31/86 (36%), Positives = 55/86 (63%)
Frame = -3
Query: 543 CTSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 364
C + F++ + D LT +M + +HGD +Q ER+ ++++F+ G + +++ TD+
Sbjct: 377 CKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVA 436
Query: 363 ARGIDVQQVSCVINYDLPSNRENYIH 286
ARG+DV + VINYD P+N E+Y+H
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVH 462
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = -3
Query: 540 TSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 361
+S F + V WL E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 457 SSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 516
Query: 360 RGIDVQQVSCVINYDLP 310
RGIDV QVS VINYDLP
Sbjct: 517 RGIDVAQVSVVINYDLP 533
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT + V+ + +++ + +++++EE L IKQFY+ + K + +LY L++
Sbjct: 396 SATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAV 455
Query: 542 AQAVIFCNTR 513
A +VIFC+T+
Sbjct: 456 ASSVIFCHTK 465
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = -3
Query: 540 TSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 361
+S F + V WL E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 482 SSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 541
Query: 360 RGIDVQQVSCVINYDLP 310
RGIDV QVS VINYDLP
Sbjct: 542 RGIDVAQVSVVINYDLP 558
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT + V+ + +++ + +++++EE L IKQFY+ + K + +LY L++
Sbjct: 421 SATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAV 480
Query: 542 AQAVIFCNTR 513
A +VIFC+T+
Sbjct: 481 ASSVIFCHTK 490
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = -3
Query: 540 TSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 361
+S F + V WL E+M R V +HGDM ER + F+ G +VLITT++ A
Sbjct: 866 SSVIFCHTKASVMWLYENMRARGHQVDVLHGDMTVVERADTIIHFKRGDFKVLITTNVFA 925
Query: 360 RGIDVQQVSCVINYDLP 310
RGIDV QVS VINYDLP
Sbjct: 926 RGIDVAQVSVVINYDLP 942
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT + V+ + +++ + +++++EE L IKQFY+ + K + +LY L++
Sbjct: 805 SATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAV 864
Query: 542 AQAVIFCNTR 513
A +VIFC+T+
Sbjct: 865 ASSVIFCHTK 874
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 672 IKGVDHVINYDMPDNIDDYIH 692
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 823 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 882
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 883 IKGVDHVINYDMPDNIDDYIH 903
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 823 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 882
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 883 IKGVDHVINYDMPDNIDDYIH 903
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 672 IKGVDHVINYDMPDNIDDYIH 692
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 823 FVSQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 882
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 883 IKGVDHVINYDMPDNIDDYIH 903
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/81 (40%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ + D L + +HG +QRER +RQFR GS VLI T + RG+D
Sbjct: 612 FVSQRAMADILASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLD 671
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P N ++YIH
Sbjct: 672 IKGVDHVINYDMPDNIDDYIH 692
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/67 (43%), Positives = 47/67 (70%)
Frame = -3
Query: 486 MHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPS 307
++ +++ V +HGD+ Q ERE + FRTG++ +L+ T + ARG+D+ V VINYDLPS
Sbjct: 447 LNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPS 506
Query: 306 NRENYIH 286
+ + Y+H
Sbjct: 507 DVDEYVH 513
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ D L M +HG +Q+ER ++ FR+G+ VLI T ++ RG+D
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLD 628
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P+N ++YIH
Sbjct: 629 IKGVDHVINYDMPNNIDDYIH 649
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ D L M +HG +Q+ER ++ FR+G+ VLI T ++ RG+D
Sbjct: 569 FVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLD 628
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ V VINYD+P+N ++YIH
Sbjct: 629 IKGVDHVINYDMPNNIDDYIH 649
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F++ D L+ ++ +HG Q +RE+ + R+G ++L+ TDL +RGID
Sbjct: 344 FVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGID 403
Query: 348 VQQVSCVINYDLPSNRENYIH 286
V ++ V+NYD P + E Y+H
Sbjct: 404 VPDITHVLNYDFPMDIEEYVH 424
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = -3
Query: 540 TSCNFLQHPSQVDWLTESMHLRDF-TVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 364
+S F+ + D + + + + +V+ +HG +DQ +R+ + F+TG +VL+ T +
Sbjct: 553 SSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVA 612
Query: 363 ARGIDVQQVSCVINYDLPSNRENYIH 286
ARG+DV+ + V+NYD P++ E+Y+H
Sbjct: 613 ARGLDVKNLILVVNYDCPNHYEDYVH 638
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F +V+ L + + ++ +H M Q R + FR G+ R L+ +DLL RGID
Sbjct: 286 FCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGID 345
Query: 348 VQQVSCVINYDLPSNRENYIH 286
+Q V+ VIN+D P N E Y+H
Sbjct: 346 IQAVNVVINFDFPRNAETYLH 366
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT P+ V + M P I + EELTL G+ Q+Y ++ E+ K+ L L+ L I
Sbjct: 223 SATFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQ-EKQKVHCLNTLFRKLQI 280
Query: 542 AQAVIFCNTRRR 507
Q++IFCN+ +R
Sbjct: 281 NQSIIFCNSTQR 292
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/81 (34%), Positives = 48/81 (59%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F + VD + E + ++ V+++HG DQ +R + FR VL+ TD+ ++G+D
Sbjct: 447 FAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLD 506
Query: 348 VQQVSCVINYDLPSNRENYIH 286
Q + VIN+D+P + ENY+H
Sbjct: 507 FQGIEHVINFDMPEDIENYVH 527
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/81 (34%), Positives = 47/81 (58%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+ D L++ + F + +HG Q +RE ++ + G+S +L+ TD+ RGID
Sbjct: 579 FVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGID 638
Query: 348 VQQVSCVINYDLPSNRENYIH 286
V+ VS V+NYD+ + E+Y H
Sbjct: 639 VKDVSLVLNYDMAKSIEDYTH 659
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 427 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 411 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++HGD+ Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y+H
Sbjct: 408 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/71 (33%), Positives = 47/71 (66%)
Frame = -3
Query: 498 LTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINY 319
+ + + ++DF + +HGDM Q ER + +FR S++L+ TD+ ARG+D+ ++ VIN+
Sbjct: 527 VAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINF 585
Query: 318 DLPSNRENYIH 286
D+ + + ++H
Sbjct: 586 DMARDIDTHVH 596
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/57 (40%), Positives = 39/57 (68%)
Frame = -3
Query: 456 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+HG M Q +R + +F++ + +L+ TD+ ARG+D+ V VINYD+PS ++Y+H
Sbjct: 313 LHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVH 369
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SATM V ++ R +RDP R+ V T++ +KQ YI + ++K L L + +
Sbjct: 225 SATMTKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVP-NKYKETYLVYLLNEHAG 283
Query: 542 AQAVIFCNT 516
A++FC T
Sbjct: 284 NSAIVFCAT 292
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F++ + + L + + ++F A+H M Q ER + F+ R+L+ TDL RG+D
Sbjct: 289 FVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMD 348
Query: 348 VQQVSCVINYDLPSNRENYIH 286
+++V+ V NYD+P + ++Y+H
Sbjct: 349 IERVNIVFNYDMPEDSDSYLH 369
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLS 546
SAT+P ++ V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L
Sbjct: 224 SATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLK-EAEKNRRLLNLLDALE 282
Query: 545 IAQAVIFCNTRRR 507
Q VIF +R
Sbjct: 283 FNQVVIFVKAVKR 295
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/81 (32%), Positives = 49/81 (60%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F++ + + L + + ++F A+H M Q ER + F+ R+L+ TDL RG+D
Sbjct: 281 FVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMD 340
Query: 348 VQQVSCVINYDLPSNRENYIH 286
+++V+ V NYD+P + ++Y+H
Sbjct: 341 IERVNIVFNYDMPEDSDSYLH 361
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLS 546
SAT+P ++ V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L
Sbjct: 216 SATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLK-EAEKNRRLLNLLDALE 274
Query: 545 IAQAVIFCNTRRR 507
Q VIF +R
Sbjct: 275 FNQVVIFVKAVKR 287
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F+Q Q D + +HGD Q RE ++ F++ +L+TTDLL+RGID
Sbjct: 652 FVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGID 711
Query: 348 VQQVSCVINYDLP 310
V + VIN+DLP
Sbjct: 712 VSDLDRVINFDLP 724
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = -3
Query: 465 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
V +++ +ER+ M +FR G VL+ T+LL RG+D+ V VINYDLP++ +YIH
Sbjct: 402 VDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIH 461
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/81 (32%), Positives = 44/81 (54%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F + Q D + + + + + +HGD ER+ + F+ G R L+ +D++ARG+D
Sbjct: 511 FCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLD 570
Query: 348 VQQVSCVINYDLPSNRENYIH 286
VQ V VI+ LP + Y+H
Sbjct: 571 VQGVPFVISVTLPDEKSMYVH 591
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/62 (33%), Positives = 40/62 (64%)
Frame = -3
Query: 471 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
F V ++H + Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 362 FRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTY 421
Query: 291 IH 286
IH
Sbjct: 422 IH 423
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/62 (33%), Positives = 40/62 (64%)
Frame = -3
Query: 471 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
F V ++H + Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 362 FRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTY 421
Query: 291 IH 286
IH
Sbjct: 422 IH 423
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = -3
Query: 471 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
F V + + R ++ +F +RVLI +D+LARG D+ +V CVINY+LP++ + +
Sbjct: 424 FEVDYFTAQLFGKRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLF 483
Query: 291 IH 286
+H
Sbjct: 484 VH 485
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = -3
Query: 546 YCTSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 367
Y + F S+ + + + V+ + M Q++R++ + Q R ++L+++DL
Sbjct: 259 YVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDL 318
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
ARGID V+ V+N D +N E Y H
Sbjct: 319 TARGIDADNVNLVVNIDAAANEETYFH 345
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT P ++ + F+RD + +++ L GIKQ+ +A LE L + ++
Sbjct: 202 SATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRY 259
Query: 542 AQAVIFCN 519
QA++FC+
Sbjct: 260 VQALVFCD 267
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = -3
Query: 546 YCTSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDL 367
Y + F S+ + + + V+ + M Q++R++ + Q R ++L+++DL
Sbjct: 259 YVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDL 318
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
ARGID V+ V+N D +N E Y H
Sbjct: 319 TARGIDADNVNLVVNIDAAANEETYFH 345
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI 543
SAT P ++ + F+RD + +++ L GIKQ+ +A LE L + ++
Sbjct: 202 SATYPRNLDNLLSTFLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRY 259
Query: 542 AQAVIFCN 519
QA++FC+
Sbjct: 260 VQALVFCD 267
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = -3
Query: 456 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E YIH
Sbjct: 303 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 359
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = -3
Query: 456 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
+H M Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E YIH
Sbjct: 470 LHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 526
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -3
Query: 528 FLQHPSQVDWLTESM-HLRD-FTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 355
F+ Q +LTE+ LR V + G M+Q++R +F + VLI TD+ +RG
Sbjct: 326 FVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASRG 385
Query: 354 IDVQQVSCVINYDLPSNRENYIH 286
+D + + VI D P+ ++YIH
Sbjct: 386 LDFEHIDWVIQVDCPAQIDDYIH 408
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
A+HG R ++ F ++ V+I+TD++ARGID+ + VI +DLP + ++H
Sbjct: 288 AVHGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVH 345
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = -3
Query: 549 VYCTSCNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTD 370
V+ +SCN V + E ++ D ++HG Q++R QF + +L+ TD
Sbjct: 319 VFFSSCN------SVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTD 372
Query: 369 LLARGIDVQQVSCVINYDLPSNRENYIH 286
+ ARG+D+ V ++ YD YIH
Sbjct: 373 VAARGLDIPAVDWIVQYDPTDEPREYIH 400
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = -3
Query: 465 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
V M + Q +R + +F+ VL++TDL +RG+D++ V VIN ++P + + YIH
Sbjct: 444 VGQMQSSLTQGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIH 503
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/83 (24%), Positives = 44/83 (53%)
Frame = -3
Query: 534 CNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 355
C ++H V+++ +H S ++ +D R++ +++F + +L+ TD+ ARG
Sbjct: 272 CATMKH---VEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARG 328
Query: 354 IDVQQVSCVINYDLPSNRENYIH 286
+D+ + VIN P + ++H
Sbjct: 329 VDIPLLDTVINLHFPPKAKLFVH 351
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/83 (24%), Positives = 44/83 (53%)
Frame = -3
Query: 534 CNFLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 355
C ++H V+++ +H S ++ +D R++ +++F + +L+ TD+ ARG
Sbjct: 272 CATMKH---VEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAARG 328
Query: 354 IDVQQVSCVINYDLPSNRENYIH 286
+D+ + VIN P + ++H
Sbjct: 329 VDIPLLDTVINLHFPPKAKLFVH 351
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 310
+MH +Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1031 SMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = -3
Query: 459 AMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 310
+MH +Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1031 SMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = -3
Query: 444 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYI 289
+ +R+ EV+ R+F LI T +L G+DV+Q + VI +D P + +Y+
Sbjct: 438 LHKRQTEVL-RRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYV 488
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 344 CTSIPRANKSVVIKTREEPVRNCLMITSRSR*SMSPCIADTVKSRRCIDSVSQSTCDGCC 523
C S P A+ S T + P++ + + MS C +DT +S C + VSQSTCD C
Sbjct: 131 CQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTC-SDTCRSS-CSNRVSQSTCDATC 188
Query: 524 R 526
+
Sbjct: 189 Q 189
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.089
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -3
Query: 480 LRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 304
L T S+ ++++ ++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 738 LNKSTASSADISASKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 34.3 bits (75), Expect = 0.089
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -3
Query: 480 LRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 304
L T S+ ++++ ++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 738 LNKSTASSADISASKQKQMEKLKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
++RGID VS V+N+D P + YIH
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAYIH 394
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPV-RILVQKEEL-TLEGIKQFYIAIELEEWKLETLCDLYD-T 552
SAT+ DD+ + + FM PV I + + +L + + Q+ + +E + L ++
Sbjct: 208 SATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEERFAILVAMFKLK 267
Query: 551 LSIAQAVIFCNT 516
L + ++++F NT
Sbjct: 268 LIVGRSILFVNT 279
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 366 LARGIDVQQVSCVINYDLPSNRENYIH 286
++RGID VS V+N+D P + YIH
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAYIH 461
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRDPV-RILVQKEEL-TLEGIKQFYIAIELEEWKLETLCDLYD-T 552
SAT+ DD+ + + FM PV I + + +L + + Q+ + +E + L ++
Sbjct: 275 SATLKDDMTTLKKLFMTGPVITIKLTEGDLPNSDQLTQYQLTCGSDEERFAILVAMFKLK 334
Query: 551 LSIAQAVIFCNT 516
L + ++++F NT
Sbjct: 335 LIVGRSILFVNT 346
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 453 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
H M+ +R + + +G +V++ T GID V VI++ LP + ENY
Sbjct: 340 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 393
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3
Query: 453 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
H M+ +R + + +G +V++ T GID V VI++ LP + ENY
Sbjct: 363 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 416
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 453 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
H + + +RE F ++ T GID V VI+Y P+N E+Y
Sbjct: 477 HAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESY 530
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -3
Query: 453 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
H ++ R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = -3
Query: 453 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 292
H ++ R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 635 TLEGIKQFYIA-IEL-EEWKLETLCDLYDTLSIAQAVIFCNTRRRWIGSLN 489
T+ GI F + + L + KLETLCD+ D + +IFC +R G L+
Sbjct: 115 TMHGISGFDLTTVPLYHQSKLETLCDIIDNCKL--EIIFCENAKRAEGFLS 163
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -3
Query: 501 WLTESMHLRDFTVSAMHGDMDQREREVIMRQ 409
W+T+ ++ V + GD+DQ+ +E++M +
Sbjct: 102 WMTQRNRIKSIFVIGLGGDVDQKTKELVMSE 132
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/81 (17%), Positives = 41/81 (50%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F + S+V +T ++ + + + ++++ + + + ++ T++++RGID
Sbjct: 380 FCETVSRVIQVTMALRQMGYNFKPVCSSVLKQQQAITLNDLEFCNIHGVVCTNIMSRGID 439
Query: 348 VQQVSCVINYDLPSNRENYIH 286
V V I ++ ++ +Y+H
Sbjct: 440 VSSVKQTIIMEMSTDFPSYMH 460
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 561 QVTQSFQLPFF*FNCNVKLFNTFQ 632
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++ T++LARGIDV V I ++ ++ + Y H
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKH 309
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 384 LITTDLLARGIDVQQVSCVINYDLPSNRENYIH 286
++ T++LARGIDV V I ++ ++ + Y H
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKH 462
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 561 QVTQSFQLPFF*FNCNVKLFNTFQ 632
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,220,463
Number of Sequences: 27780
Number of extensions: 359960
Number of successful extensions: 1047
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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