Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00086
(722 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 70 3e-14
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.72
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.72
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 25 0.72
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.72
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 25 0.72
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.7
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.7
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.7
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.7
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.9
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 69.7 bits (163), Expect = 3e-14
Identities = 28/81 (34%), Positives = 51/81 (62%)
Frame = -3
Query: 528 FLQHPSQVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 349
F++ + D++ + ++ +++HGD QR+RE + F++G +L+ T + ARG+D
Sbjct: 457 FVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLD 516
Query: 348 VQQVSCVINYDLPSNRENYIH 286
++ VS VINYDLP + Y+H
Sbjct: 517 IKNVSHVINYDLPKGIDEYVH 537
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 722 SATMPDDVLEVSRCFMRD 669
SAT PD+V ++R F+ +
Sbjct: 389 SATFPDEVQHLARRFLNN 406
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.72
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 181 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 86
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.72
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 181 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 86
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 25.0 bits (52), Expect = 0.72
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = -2
Query: 721 LLPCLMMYWKYLDAL*EILYAYLYRRKSLPWKVLNNFTLQLN*KNGSWKLCVTCMIHCLL 542
++ C M + + I Y ++ R LPW NN+ N N + ++C +
Sbjct: 68 VMSCWMNVYYIVILAWAIFYFFMSMRSELPWGSCNNYWNTKNCVNPYDRDSLSCWLQMTK 127
Query: 541 H 539
H
Sbjct: 128 H 128
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 25.0 bits (52), Expect = 0.72
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 181 SIVEMPSDVANLI*GAYIFPIYILCPAFYCDI 86
+I+ MP +VA L+ G +IF I++ CD+
Sbjct: 86 AILVMPFNVAYLLLGKWIFGIHLCKLWLTCDV 117
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 25.0 bits (52), Expect = 0.72
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 525 LQHPSQVDWLTESMH 481
LQHP V W T S+H
Sbjct: 884 LQHPGAVVWFTVSLH 898
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 37 EVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
+ S+ R++ S R Y+N + EY+ R R
Sbjct: 33 KTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 37 EVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
+ S+ R++ S R Y+N + EY+ R R
Sbjct: 33 KTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 37 EVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
+ S+ R++ S R Y+N + EY+ R R
Sbjct: 33 KTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 37 EVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
+ S+ R++ S R Y+N + EY+ R R
Sbjct: 33 KTSRKRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 22 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 68
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 270 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 316
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.9
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 4 LEEISIYYFHIEVSKVRFTGSVGRSSYKYRNRTQDTEYKSEKCRRLR 144
L + + S+ R++ S R Y+N + EY+ R R
Sbjct: 271 LHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRETSRERSR 317
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,737
Number of Sequences: 438
Number of extensions: 4652
Number of successful extensions: 31
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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