Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00085
         (737 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051876-1|AAK93300.1|  395|Drosophila melanogaster LD37002p pro...    48   2e-05
AE014297-3579|AAF56317.1|  395|Drosophila melanogaster CG13626-P...    48   2e-05
AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p pro...    32   0.71 
AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA...    32   0.71 
BT023784-1|AAZ41793.1|  752|Drosophila melanogaster LD09622p pro...    30   3.8  
AE014297-1767|AAF54995.2|  752|Drosophila melanogaster CG33101-P...    30   3.8  

>AY051876-1|AAK93300.1|  395|Drosophila melanogaster LD37002p
           protein.
          Length = 395

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/71 (30%), Positives = 45/71 (63%)
 Frame = +3

Query: 291 MSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDSVVDLIDAYLKAVCK 470
           M+D +RD ID  +++ +   +  L + R+D +     PQ R+++D+V+DL+ +YL +V +
Sbjct: 82  MTDAQRDLIDRESEKFVTFYTQHLAKMRSDWKSAKRKPQERQHIDAVLDLLVSYLHSVEQ 141

Query: 471 VHSELKAMRVK 503
           ++ + K  RV+
Sbjct: 142 IYLDQKKYRVQ 152



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +1

Query: 55  MDITPLFKACIKTVKTRNKA--FGIHSPISEDKQRILRVKSKNAFMATAKDICSQITKLR 228
           MDIT  FKA + TV+ + KA   G   P +    +   +  K+ F   AK++C++IT LR
Sbjct: 1   MDITQSFKASVMTVRLQRKAELAGKAKPATV-PTKTGPIGPKDDFAKQAKEVCNKITSLR 59

Query: 229 DFLLEHR 249
           + L+E+R
Sbjct: 60  NVLIENR 66


>AE014297-3579|AAF56317.1|  395|Drosophila melanogaster CG13626-PA
           protein.
          Length = 395

 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 22/71 (30%), Positives = 45/71 (63%)
 Frame = +3

Query: 291 MSDEERDQIDTGAQRIMNTCSHLLKEFRNDNRRTTVTPQTREYMDSVVDLIDAYLKAVCK 470
           M+D +RD ID  +++ +   +  L + R+D +     PQ R+++D+V+DL+ +YL +V +
Sbjct: 82  MTDAQRDLIDRESEKFVTFYTQHLAKMRSDWKSAKRKPQERQHIDAVLDLLVSYLHSVEQ 141

Query: 471 VHSELKAMRVK 503
           ++ + K  RV+
Sbjct: 142 IYLDQKKYRVQ 152



 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +1

Query: 55  MDITPLFKACIKTVKTRNKA--FGIHSPISEDKQRILRVKSKNAFMATAKDICSQITKLR 228
           MDIT  FKA + TV+ + KA   G   P +    +   +  K+ F   AK++C++IT LR
Sbjct: 1   MDITQSFKASVMTVRLQRKAELAGKAKPATV-PTKTGPIGPKDDFAKQAKEVCNKITSLR 59

Query: 229 DFLLEHR 249
           + L+E+R
Sbjct: 60  NVLIENR 66


>AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p
           protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 96  NSFYASLK*WCYIHFKRICLCFKCFF 19
           N+F ASL  WC +   ++CL F C F
Sbjct: 74  NAFLASLALWCIVRRAKLCLDFSCTF 99


>AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA
           protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.71
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 96  NSFYASLK*WCYIHFKRICLCFKCFF 19
           N+F ASL  WC +   ++CL F C F
Sbjct: 74  NAFLASLALWCIVRRAKLCLDFSCTF 99


>BT023784-1|AAZ41793.1|  752|Drosophila melanogaster LD09622p
           protein.
          Length = 752

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 633 NNLDLSENEMAIMSDEGELTSEELQCLSRRM 725
           +NL   EN +A++ D    + EELQ ++R+M
Sbjct: 673 SNLSTPENVLAVLDDSDLFSPEELQSIARKM 703


>AE014297-1767|AAF54995.2|  752|Drosophila melanogaster CG33101-PA
           protein.
          Length = 752

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 633 NNLDLSENEMAIMSDEGELTSEELQCLSRRM 725
           +NL   EN +A++ D    + EELQ ++R+M
Sbjct: 673 SNLSTPENVLAVLDDSDLFSPEELQSIARKM 703


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,192,043
Number of Sequences: 53049
Number of extensions: 484296
Number of successful extensions: 1213
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)