BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00083
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033077-1|AAH33077.1| 680|Homo sapiens HEAT repeat containing ... 53 1e-06
BC018730-1|AAH18730.2| 680|Homo sapiens HEAT repeat containing ... 53 1e-06
BC014415-1|AAH14415.1| 726|Homo sapiens HEATR3 protein protein. 53 1e-06
AK000725-1|BAA91342.1| 594|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AF462442-1|AAP97710.1| 314|Homo sapiens hypothetical protein pr... 46 1e-04
CR533552-1|CAG38583.1| 509|Homo sapiens SPAG6 protein. 32 2.5
AL513128-4|CAH72210.1| 509|Homo sapiens sperm associated antige... 32 2.5
AL513128-3|CAH72209.1| 458|Homo sapiens sperm associated antige... 32 2.5
AL513128-2|CAH72208.1| 191|Homo sapiens sperm associated antige... 32 2.5
AL158211-15|CAI15963.1| 509|Homo sapiens sperm associated antig... 32 2.5
AL158211-14|CAI15962.1| 458|Homo sapiens sperm associated antig... 32 2.5
AL158211-13|CAI15961.1| 191|Homo sapiens sperm associated antig... 32 2.5
AF079363-1|AAC32590.1| 509|Homo sapiens sperm flagellar protein... 32 2.5
BC030585-1|AAH30585.1| 458|Homo sapiens sperm associated antige... 31 3.4
>BC033077-1|AAH33077.1| 680|Homo sapiens HEAT repeat containing 3
protein.
Length = 680
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 VKVAAPLLLDPASSVRNASSGMLRNLSAV-KLDICDSLMDQDIMTPLTCYFHEHAESWIP 469
V+ PLLLDP+ +VR ++G LRNLSA ++CD ++ +DIMTPL E +
Sbjct: 81 VRRLGPLLLDPSLAVRETAAGALRNLSACGGFEVCDDMVTKDIMTPLVALLKECSAGLDS 140
Query: 470 DPIS--KSRDEDIDTLFNV 520
+ +S + +D++ +++ N+
Sbjct: 141 NEMSLQEKKDQNRNSIENI 159
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDNP 687
+ VN+L N+CE S AV + L+I+ +YL +D+ +V CL V EDNP
Sbjct: 162 ETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFPTNVDLAISVAYCLQTVTEDNP 219
>BC018730-1|AAH18730.2| 680|Homo sapiens HEAT repeat containing 3
protein.
Length = 680
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 VKVAAPLLLDPASSVRNASSGMLRNLSAV-KLDICDSLMDQDIMTPLTCYFHEHAESWIP 469
V+ PLLLDP+ +VR ++G LRNLSA ++CD ++ +DIMTPL E +
Sbjct: 81 VRRLGPLLLDPSLAVRETAAGALRNLSACGGFEVCDDMVTKDIMTPLVALLKECSAGLDS 140
Query: 470 DPIS--KSRDEDIDTLFNV 520
+ +S + +D++ +++ N+
Sbjct: 141 NEMSLQEKKDQNRNSIENI 159
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDNP 687
+ VN+L N+CE S AV + L+I+ +YL +D+ +V CL V EDNP
Sbjct: 162 ETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFPTNVDLAISVAYCLQTVTEDNP 219
>BC014415-1|AAH14415.1| 726|Homo sapiens HEATR3 protein protein.
Length = 726
Score = 53.2 bits (122), Expect = 1e-06
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +2
Query: 293 VKVAAPLLLDPASSVRNASSGMLRNLSAV-KLDICDSLMDQDIMTPLTCYFHEHAESWIP 469
V+ PLLLDP+ +VR ++G LRNLSA ++CD ++ +DIMTPL E +
Sbjct: 127 VRRLGPLLLDPSLAVRETAAGALRNLSACGGFEVCDDMVTKDIMTPLVALLKECSAGLDS 186
Query: 470 DPIS--KSRDEDIDTLFNV 520
+ +S + +D++ +++ N+
Sbjct: 187 NEMSLQEKKDQNRNSIENI 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDNP 687
+ VN+L N+CE S AV + L+I+ +YL +D+ +V CL V EDNP
Sbjct: 208 ETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFPTNVDLAISVAYCLQTVTEDNP 265
>AK000725-1|BAA91342.1| 594|Homo sapiens protein ( Homo sapiens
cDNA FLJ20718 fis, clone HEP17872. ).
Length = 594
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDNP 687
+ VN+L N+CE S AV + L+I+ +YL +D+ +V CL V EDNP
Sbjct: 76 ETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRFPTNVDLAISVAYCLQTVTEDNP 133
>AF462442-1|AAP97710.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 46.4 bits (105), Expect = 1e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDNP 687
+ VN+L N+CE S AV + L+I+ +YL +D+ +V CL V EDNP
Sbjct: 76 ETVNVLWNICECSSRAVSIFNKEGCLEIVLKYLSRLPTNVDLAISVAYCLQTVTEDNP 133
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +2
Query: 362 RNLSAVK-LDICDSLMDQDIMTPLTCYFHEHAESWIPDPIS--KSRDEDIDTLFNV 520
RNLSA ++CD ++ +DIMTPL E + + +S + +D++ +++ N+
Sbjct: 18 RNLSACGGFEVCDDMVTKDIMTPLVALLKECSAGLDSNEMSLQEKKDQNRNSIENI 73
>CR533552-1|CAG38583.1| 509|Homo sapiens SPAG6 protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL513128-4|CAH72210.1| 509|Homo sapiens sperm associated antigen 6
protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL513128-3|CAH72209.1| 458|Homo sapiens sperm associated antigen 6
protein.
Length = 458
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL513128-2|CAH72208.1| 191|Homo sapiens sperm associated antigen 6
protein.
Length = 191
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL158211-15|CAI15963.1| 509|Homo sapiens sperm associated antigen
6 protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL158211-14|CAI15962.1| 458|Homo sapiens sperm associated antigen
6 protein.
Length = 458
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AL158211-13|CAI15961.1| 191|Homo sapiens sperm associated antigen
6 protein.
Length = 191
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>AF079363-1|AAC32590.1| 509|Homo sapiens sperm flagellar protein
Repro-SA-1 protein.
Length = 509
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQTAALALGRLANYNDDLAEAVVKCDILPQL 88
>BC030585-1|AAH30585.1| 458|Homo sapiens sperm associated antigen 6
protein.
Length = 458
Score = 31.5 bits (68), Expect = 3.4
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +2
Query: 257 PENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
P+NI+ + N G++ + LLLD +++ ++ L L+ D+ ++++ DI+ L
Sbjct: 31 PQNIETLQNAGVMSLLRTLLLDVVPTIQQIAALALGRLANYNDDLAEAVVKCDILPQL 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,731,536
Number of Sequences: 237096
Number of extensions: 1820447
Number of successful extensions: 3503
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3500
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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