Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00083
         (753 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p pro...    60   2e-09
AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA...    60   2e-09

>AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p
           protein.
          Length = 625

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = +2

Query: 260 ENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
           E + E+ +  LV++AAPLL D  S++RNA++G  RNLS    ++CD L++ DI+T L
Sbjct: 65  EKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRNLSVFGTEVCDFLVENDILTAL 121



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +1

Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDN 684
           Q ++LL NLCESS  A + + Q+  L  L    D   FG+++  +V Q + VV E+N
Sbjct: 146 QAIHLLRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLEVAISVAQLVLVVSENN 202


>AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA
           protein.
          Length = 625

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = +2

Query: 260 ENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPL 430
           E + E+ +  LV++AAPLL D  S++RNA++G  RNLS    ++CD L++ DI+T L
Sbjct: 65  EKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRNLSVFGTEVCDFLVENDILTAL 121



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +1

Query: 514 QCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVVEDN 684
           Q ++LL NLCESS  A + + Q+  L  L    D   FG+++  +V Q + VV E+N
Sbjct: 146 QAIHLLRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLEVAISVAQLVLVVSENN 202


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,454,776
Number of Sequences: 53049
Number of extensions: 605078
Number of successful extensions: 1706
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)