Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00083
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical ... 31 0.66
Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical p... 29 4.7
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 28 6.2
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 28 6.2
Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical pr... 28 8.2
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 8.2
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 8.2
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 8.2
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 8.2
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 8.2
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 28 8.2
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 8.2
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 8.2
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 8.2
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 8.2
>AF106579-8|AAC78201.1| 710|Caenorhabditis elegans Hypothetical
protein F54E2.5 protein.
Length = 710
Score = 31.5 bits (68), Expect = 0.66
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 505 YIVQCVNLLLNLCESSDLAVKYVGQSRILDILPRYLDMSLFGI---DIVAAVLQCLFVVV 675
+I+ C NLL+N+ + L K QS I + +D + I ++V A+ C F V
Sbjct: 452 FIISCANLLINVPATLSLISKDSVQSEIFSFISHLIDFCHYSILFSNLVIAIHPCQFPAV 511
>Z82057-5|CAB04861.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +1
Query: 82 KLRLVKSKTLWLAKRAMKKSNFQMIAKRMRFKRY*ISCREQVLKRSIAVCKLWQCL*SSR 261
KLRL K L ++++NF I K + IS K CK+W C ++
Sbjct: 211 KLRLSSKKLSSLQNYVLRQANFLAIVKCIYIPLIYISAAYYPEKFWYVACKVWDCYFTAV 270
Query: 262 EY**SYKPGSCKSCCSFIAGS--C*FCEKC 345
SY + ++ S S C C C
Sbjct: 271 LIQVSYLATNIRNLASLFNPSRLCTMCSCC 300
>Z81142-11|CAB03512.3| 325|Caenorhabditis elegans Hypothetical
protein ZK1037.11 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +1
Query: 82 KLRLVKSKTLWLAKRAMKKSNFQMIAKRMRFKRY*ISCREQVLKRSIAVCKLWQCL*SSR 261
KLRL K L ++++NF I K + IS K CK+W C ++
Sbjct: 211 KLRLSSKKLSSLQNYVLRQANFLAIVKCIYIPLIYISAAYYPEKFWYVACKVWDCYFTAV 270
Query: 262 EY**SYKPGSCKSCCSFIAGS--C*FCEKC 345
SY + ++ S S C C C
Sbjct: 271 LIQVSYLATNIRNLASLFNPSRLCTMCSCC 300
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/82 (20%), Positives = 33/82 (40%)
Frame = +2
Query: 266 IDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPLTCYFH 445
++ +N +A L + P ++R A + LR + D Q+ + +
Sbjct: 81 LNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFIS 140
Query: 446 EHAESWIPDPISKSRDEDIDTL 511
E + IPD I +D+D +
Sbjct: 141 ESTKGKIPDMIKPDNLKDVDAI 162
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/82 (20%), Positives = 33/82 (40%)
Frame = +2
Query: 266 IDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMTPLTCYFH 445
++ +N +A L + P ++R A + LR + D Q+ + +
Sbjct: 81 LNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFIS 140
Query: 446 EHAESWIPDPISKSRDEDIDTL 511
E + IPD I +D+D +
Sbjct: 141 ESTKGKIPDMIKPDNLKDVDAI 162
>Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical
protein Y41E3.14 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 422 TPLTCYFHEHAESWIPDPISKSRD 493
TP+ C F+ A +WIP+P+S+ D
Sbjct: 168 TPIIC-FNSKALAWIPEPLSEIDD 190
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 950 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 995
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 931 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 976
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 987 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 1032
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 941 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 986
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 941 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 986
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 941 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 986
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 950 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 995
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 941 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 986
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 931 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 976
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 227 FANFGNVYRVPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLR 364
F +F ++ ++ +N+ +IN+G P +++RN S M+R
Sbjct: 987 FYSFNDLLQLTQNLLAIINEGPATEQVPSHRAMVNAIRNMSKSMMR 1032
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,988,892
Number of Sequences: 27780
Number of extensions: 321859
Number of successful extensions: 944
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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