Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00082
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 96 2e-20
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 62 3e-10
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 52 5e-07
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 50 2e-06
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 49 4e-06
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 48 5e-06
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 48 5e-06
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 48 8e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 48 8e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 47 1e-05
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 46 3e-05
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 45 4e-05
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 8e-05
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 44 8e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 44 1e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 44 1e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 44 1e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 43 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 42 6e-04
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 42 6e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 39 0.003
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 39 0.003
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 38 0.007
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 38 0.009
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.009
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 38 0.009
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 38 0.009
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 36 0.036
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.083
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 33 0.19
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.19
SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 33 0.25
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 32 0.34
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 32 0.34
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 32 0.34
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 31 0.78
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 29 2.4
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.4
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 29 3.1
SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05) 29 3.1
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 29 4.1
SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 28 5.5
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 28 5.5
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 7.2
SB_25359| Best HMM Match : p450 (HMM E-Value=0) 28 7.2
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_42811| Best HMM Match : SRCR (HMM E-Value=0) 27 9.6
SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_14896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38) 27 9.6
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/158 (35%), Positives = 83/158 (52%)
Frame = -1
Query: 485 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
G S D N DD KLFVGGLS+ETT + L+++F YGE+ +++K D TGR RG
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRG 71
Query: 305 FAFIVFKAPESIDKVMALVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSE 126
FAF+ FK D + P + R K +G E S K + E
Sbjct: 72 FAFVQFKHQSEADAIDPKPAAP-IGKPPHLRVKKIFVGGLKPETSDEKIR----EYFGKA 126
Query: 125 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 12
+ + E+E + + N+R+GFCF++F+SE V+ + +T
Sbjct: 127 YAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICET 164
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 62.5 bits (145), Expect = 3e-10
Identities = 42/154 (27%), Positives = 86/154 (55%), Gaps = 19/154 (12%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
RK+F+GGL+W TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S+++V+
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVL 106
Query: 257 ALVNTPSTTRK*TQRRL--KHDMG--RFLSEDSAVKSQMMKS---ETSFSEF-------- 123
+ R+ +R + + G +S+ + + S E E+
Sbjct: 107 KKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSLCRKN 166
Query: 122 --GTILEVEMPFDKTKNQR-KGFCFITFESEQVV 30
G +++V++ D+ +R +GF F+TF+++++V
Sbjct: 167 GMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIV 200
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGA------YGEIESINVKTD-PNTGRSRGFAFIVFKAPE 276
RK+FVGGL+ T +++++++F + GE+ +++K D N R RGFAF+ F E
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDE 198
Query: 275 SIDKVMAL 252
++KV A+
Sbjct: 199 IVEKVCAM 206
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 70 FSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLK 107
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 11/50 (22%)
Frame = -3
Query: 249 EHTINNKKVDPKK-----------AKARHGKIFVGGLSSEISDDEIRNFF 133
+H +++++++PK+ A ++ KIFVGGL+S +++I+ +F
Sbjct: 110 DHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYF 159
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 255
L V GL + TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 303
+KLFVG L TT+K L ++F +GE+ + + P R GF
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR 3
F+ FG I E+ D + +GF F+ F+ ++ ++L T R
Sbjct: 135 FTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTSHR 178
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = -1
Query: 467 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 288
N E D KLFVGGL+ ETT++ LR++F AYGE+ + V D T +SRGF ++ F
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = -1
Query: 476 QDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE--IESIN--VKTDPNTGRSR 309
+D NSA + + +K+FVGGL + T +++++ + E ++ ++ +K + T + R
Sbjct: 96 RDDNSATS--HEKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDET-KHR 152
Query: 308 GFAFIVFKAPESIDKV 261
GFAF+ + D++
Sbjct: 153 GFAFVELNNEDQADEL 168
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
F +G + +V + D + +GF ++TF +V ++LK
Sbjct: 34 FEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLK 73
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFFQ 130
K+FVGGL+ E +++ +R +F+
Sbjct: 15 KLFVGGLNRETTNETLREYFE 35
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Frame = -1
Query: 443 DDDR--KLFVGGLSWETTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVF- 288
DD + KLFVGGL+ +TT++ +R +F G+ ++ S+++ P G+SR F F+ F
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFS 61
Query: 287 KAPESIDKVMALVNTPSTTRK*TQ--RRLKHDMGRFLSEDSAVKSQM--MKSETSFSEFG 120
+ ID ++ + S K + R + D L+ K + +K E S +
Sbjct: 62 NGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLKDEHSEEDVK 121
Query: 119 TI---------LEVEMPFDKTKNQRKGFCFITFESEQVVNDL 21
T LE++M D+ N+ KG+CF+ F +E +V+ L
Sbjct: 122 TALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKL 163
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 51.6 bits (118), Expect = 5e-07
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAL 252
L++ GL TTD +L YG I S D +T +G+ F+ F++P S K V AL
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161
Query: 251 VNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGTILEVEMPFDKTKNQR 72
VN + Q+ + D ++ E FS++G ++ + DK N
Sbjct: 162 VNKGIQAQMAKQQ--EQDPTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNS- 218
Query: 71 KGFCFITFES----EQVVNDLLK 15
KG F ES EQV+ D K
Sbjct: 219 KGVGFARMESAEKCEQVIKDFNK 241
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/73 (30%), Positives = 43/73 (58%)
Frame = -1
Query: 455 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 276
A G + RKL++G L++ + + E+ F +G +E +++ D +GRSRGF F++ ++ +
Sbjct: 2 ADGENRGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSAD 60
Query: 275 SIDKVMALVNTPS 237
I + +N S
Sbjct: 61 QIAPAIEKMNQSS 73
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = -1
Query: 386 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVL 166
Score = 32.3 bits (70), Expect = 0.34
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEI 354
+K+F+GGLS T++++++ +F +G++
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -3
Query: 231 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 133
+++D KK KIF+GGLS+ S+++++ +F
Sbjct: 171 QELDGKKMVTTTKKIFIGGLSTNTSEEDMKKYF 203
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 12
F +FG + E + D + +GF F+TF+ + V+ +L +
Sbjct: 128 FEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 168
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKV 261
R +FVG L T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V
Sbjct: 42 RTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESV 99
Query: 260 MA----LVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGTILEVEMPF 93
+ +++ + + K + S S +SQ+++ FS G I V +P
Sbjct: 100 LGRDDHVIDNSDVSMEKQDTYRKVILKNIPS--SIGESQILEH---FSSSGEIASVYIPE 154
Query: 92 DKTKNQRKGFCFITFESEQVVNDLLKTPK 6
+ +RKG C +TF S +++K K
Sbjct: 155 NLKTKERKGHCIVTFASVTEAFEVVKKRK 183
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
D++ +D RK+ + + + ++ +HF + GEI S+ + + T +G +
Sbjct: 108 DNSDVSMEKQDTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIV 167
Query: 293 VF 288
F
Sbjct: 168 TF 169
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
D R +F+G L ++ ++ LR+ F G +ES+ + D TG +GF +++F++ +++
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVF 112
Query: 263 VMALVNTPSTTRK 225
+ + N RK
Sbjct: 113 ALKMNNAEFKGRK 125
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -1
Query: 464 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVF 288
SA D LF+G L E +K L D F A+G I ++ + D +TG S+GFAFI F
Sbjct: 90 SAHNKNLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINF 149
Query: 287 KAPESIDKVMALVN 246
+ ++ D + +N
Sbjct: 150 ASFDASDAAIEAMN 163
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
+D +++FV G + ETT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 21
F E+G + E ++ DK KG+ FITFES++V + L
Sbjct: 28 FEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/60 (30%), Positives = 38/60 (63%)
Frame = -1
Query: 437 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
+R LFV LS +T + ++ +F YG++ +++ TD TG+S+G + + P +++K++
Sbjct: 318 ERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKIL 377
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+ R +FVGGL+ T ++ L+D+F +GE+ES+ + G SR + F++FK
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK 128
Score = 35.1 bits (77), Expect = 0.048
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 255
+KL V L ++TT ELR++F GE+ I++ N+ + A + F+ + I KV+
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGELTGIDLLI--NSEKRTCAAIVFFRNLKDIKKVVE 293
Query: 254 LVNTPSTTRK*T-QRRLKHDMG---RFLSEDS-AVKSQMMKSETSFSEFGTILEVEMPFD 90
+T + T Q + G R L D+ + ++ + F +G + +V + D
Sbjct: 294 ENHTIKGLKVRTVQLPNEEKQGVRERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTD 353
Query: 89 KTKNQRKGFCFITFESEQVVNDLLKTP 9
+ + KG + VN +L+ P
Sbjct: 354 RETGKSKGCGVVKLRHPGTVNKILEEP 380
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
R ++VGGL T++ +R+HF +G IE++ + + G G
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTG 199
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -3
Query: 237 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFQ 130
N+ PK + +FVGGL+S ++ ++++F+
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFE 101
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/155 (20%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+++VG +++E ++ +R F +G I I++ DP + +GFAF+ + PE+ +
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 251 VN------------TPSTTRK*TQ--RRLKHDMGRFLS-EDSAVKSQMMKSE--TSFSEF 123
+N PS + + + + ++ ++V +++ + + F F
Sbjct: 163 MNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAF 222
Query: 122 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 18
G ++ + + + KG+ FI +E++Q ND +
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAI 257
Score = 37.1 bits (82), Expect = 0.012
Identities = 12/62 (19%), Positives = 37/62 (59%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
++++ + + + +++ F A+G++ ++ +P TG+ +G+ FI ++ +S + +A
Sbjct: 200 RIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Query: 251 VN 246
+N
Sbjct: 260 MN 261
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
++VG L + T+ +L F YG++ + + D T SRG AFI+F +S +A V
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 248 NTPSTTRK*TQRRLKHDMGR 189
N + + + D GR
Sbjct: 72 NKKQMFGRTIKCTIAKDNGR 91
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L++ L D+ LR+ F YG I S V D + G S+GF F+ F +PE K + +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVTEM 272
Query: 248 N 246
N
Sbjct: 273 N 273
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/61 (29%), Positives = 37/61 (60%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
++V + D+++++ G+I S+ V TDP G+S+GF F+ F+ PE ++ + ++
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVNVL 169
Query: 248 N 246
N
Sbjct: 170 N 170
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 279
L+VG L+ + T+ L + F G + SI V D T RS G+A++ F+ P
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQP 64
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 45.2 bits (102), Expect = 4e-05
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Frame = -1
Query: 458 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 279
E+ D R +F L+ ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 138 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 197
Query: 278 ESID-------------KVMALVNTPSTTRK*TQ-RRLKHDMGRFLSEDSAVKSQMMKS- 144
++ +M ++ R + RLK +G ++ + ++
Sbjct: 198 SAVPLAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 257
Query: 143 -ETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
+ F FGT+ V++ +D N+ KG+ F+ F +
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAE 294
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+L+VG L + T+ ++ F +G ++S+ + D T RS+G+ F+ F+ E+ + M
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQ 302
Query: 251 VN 246
+N
Sbjct: 303 MN 304
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = -1
Query: 506 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 327
G+ ++ D D + + DDD GG + ++ +H A G +E++ + TD
Sbjct: 434 GDDDDDDDDDDDDDDDDDDDDDDDDDDDGGGDDDDDYERGAINHSNA-GPLENVRIPTDK 492
Query: 326 NTGRSRGFAFIVFKAPESIDKVMALVN 246
NTG+ R F F+ F +P S+ L++
Sbjct: 493 NTGQQRSFGFVEFSSPVSVHYASELLD 519
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
KLFVGG+ +E+ D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
K+FVGG+ E DD +R FF
Sbjct: 11 KLFVGGIPYESGDDALRKFF 30
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -1
Query: 497 ENGGGDSQDHNSAEAPGR-DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
E+ + +H+ P + +F+ LS+++T K + + F +G+I V D T
Sbjct: 394 EDDASEDDNHSQRSKPSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLT 453
Query: 320 GRSRGFAFIVFKAPESIDKVMALVNTPS 237
S+G AF+ +++ ES+ + +A + S
Sbjct: 454 QHSKGSAFVKYRSAESVTQCLAATDEDS 481
Score = 33.5 bits (73), Expect = 0.15
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Frame = -1
Query: 479 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
S+ + +AP D R + + GL T+K++ GE+E P G A
Sbjct: 145 SKSKSLRKAPQTDAGRTVILSGLPASITEKQIYKRCRKLGEVEK---TIFPVAGHDSPTA 201
Query: 299 FIVFKAPESIDKVMALVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS-------- 144
++FK+ + + +A +N T + + + + S + KS+++
Sbjct: 202 SLLFKSYKDARQAVAKLN-GKTLKGVKVKAVIESKDKSSSPKGSKKSRLIIRNLAFNCTE 260
Query: 143 ---ETSFSEFGTILEVEMPFDKT--KNQRKGFCFITF 48
+ +FS FG + E +P K +N++ GF F+ F
Sbjct: 261 AILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQF 297
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/105 (24%), Positives = 47/105 (44%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 255
R +FVG + +E ++++L++ F G + S + D TG+ +G+ F +K E+ M
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMR 84
Query: 254 LVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFG 120
+N R L+ D +KS M + S +G
Sbjct: 85 NLNGYEL----NGRALRVDSAASEKNKEEIKSMEMTARPEVSPYG 125
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -1
Query: 452 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
P D L V L++ TT ++L+ F YG++ I + D NT SRGFAF+ F
Sbjct: 10 PEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRD 69
Query: 272 IDKVM 258
+ M
Sbjct: 70 AEDAM 74
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -1
Query: 518 QPAYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 339
QP G +EN S P D K+F+GGL + ++++ ++GE+ + N+
Sbjct: 647 QPIPGMSENASVHVPGVVSTVVP--DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNL 704
Query: 338 KTDPNTGRSRGFAF 297
D TG S+G+AF
Sbjct: 705 VKDSATGLSKGYAF 718
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
KL+V L+ +++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FS +G + V++P D+T N +GF ++ + + LK
Sbjct: 1177 FSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
+D ++F G L E TD+ L F Y + D + +S+G+ F+ FK P K
Sbjct: 215 NDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKA 274
Query: 260 MALVNTPS 237
M +N S
Sbjct: 275 MREMNVLS 282
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
++ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ F + E ++K
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKA 61
Query: 260 M 258
+
Sbjct: 62 I 62
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/58 (29%), Positives = 36/58 (62%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
++ K ++G L ++ + +L+D F Y ++ + V +D T R RGFAF+ F + ++++
Sbjct: 228 EECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNME 284
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 350 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 276
R +VGGL+ E +K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 137 SFSEFGTILEVEMPFDKTKNQRKGFCFITFE 45
+F FG I +V++P D T ++ +GF F+ FE
Sbjct: 24 AFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 330
A + G +D + P D D LFV L+ TTD++L F +G I S V D
Sbjct: 95 ARSPNGLIRDDRIGDIPDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRD 154
Query: 329 PNTGRSRGFAFIVFKAPESIDK 264
TG S +AFI F+ E ++
Sbjct: 155 QKTGESLQYAFIEFEKDEDCER 176
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
E FS FGTIL E+ D+ + + FI FE ++
Sbjct: 137 EIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDE 172
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE-SIDKVMAL 252
LFVG L +E T+ + D YG IE + + TG S+G+ F+ + E ++ L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 251 VNTPS 237
+NT S
Sbjct: 175 LNTAS 179
Score = 31.5 bits (68), Expect = 0.59
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
R LFV L + + L ++ F G + V +P G SRGFAF+ + E +K
Sbjct: 205 RTLFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK 262
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = -1
Query: 533 RYYHRQPAYGNAENGGGDSQDHN-SAEAPGRDD---DRKLFVGGLSWETTDKELRDHFGA 366
R+Y+ Q A G G+S AP DD +RKL++G L ++ +
Sbjct: 350 RHYYDQHARPLPPIGDGESGTSGVPLAAPEIDDAVSERKLWIGNLDKRLSEFNILKILQQ 409
Query: 365 YGEIESINVK---TDPNTGRSRGFAFIVFKAPESIDKVMALVN 246
+GEIE PN G RG+ F+ FK E K + +N
Sbjct: 410 FGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKALRGLN 452
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = -1
Query: 503 NAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 324
N++ D +H E D+ L + + + ++++ FG G + S + D
Sbjct: 4 NSKAMAEDINNHEPMENGTSDERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRA 63
Query: 323 TGRSRGFAFIVFKAPESIDKVMALVN 246
TG+S G+AF+ + P+ +K + +N
Sbjct: 64 TGQSLGYAFVNYDNPDDANKAVREMN 89
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = -1
Query: 521 RQPAYGNAENG-GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 345
R AY + E G GG+S P + LFV + E + ++ + F YGEI+++
Sbjct: 265 RPDAYDSIEGGEGGESGPARCEWHPV--EGWILFVTNIHEEAQEDDIHELFSDYGEIKNL 322
Query: 344 NVKTDPNTGRSRGFAFIVFKAPESIDKVMALVN 246
+V D TG +G+A + ++ + + +N
Sbjct: 323 HVNLDRRTGFIKGYALVEYETFKEAQSALEALN 355
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -1
Query: 506 GNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVK 336
GN GGG + + GRD + L V LS++TT L A+ + V
Sbjct: 262 GNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSYDTTTDSLG---AAFEGCSNAKVI 318
Query: 335 TDPNTGRSRGFAFIVFKAPESIDKVMA 255
D +G SRGF F+ + E+ KV++
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLS 345
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
++ +F+G LS++ ++ L F G + V T GRSRGF + F + E +K
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQE--GRSRGFGYADFTSKEDYNKA 235
Query: 260 MAL 252
+ L
Sbjct: 236 LEL 238
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIE 351
G +D K+F+GGL++ TT+++L+++F YG +E
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVE 229
Score = 31.5 bits (68), Expect = 0.59
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = -3
Query: 219 PKKAKARHGKIFVGGLSSEISDDEIRNFF 133
P++ A GK+F+GGL+ ++++++ +F
Sbjct: 194 PQRGSANDGKVFIGGLAFGTTEEDLKEYF 222
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D R +++ + L FG YG IE +++ TG+S+GF ++ ++ ES +
Sbjct: 61 DQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
Query: 260 MA 255
+A
Sbjct: 120 LA 121
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/30 (50%), Positives = 24/30 (80%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINV 339
L+VGGL + T+++LRDHF +GE+ SI++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISM 335
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
FSEFG +L V +P K + KGF FI FES+Q
Sbjct: 108 FSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = -1
Query: 386 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALVNTPSTTRK*TQR 213
L+ F +G++ +++ + G +GFAFI F++ + + V+ + N S T+K +R
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKR 161
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -1
Query: 491 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR 315
GGG +++ E PG R LFVG + TT +L++ F YGE+ +++K P
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPG--- 285
Query: 314 SRGFAFIVF 288
+ +AF+ F
Sbjct: 286 NNPYAFVQF 294
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV--KTDPNTGRSRGFAFI 294
+ R L+VG L ++++ HF YG +ES+ + K GR+ F+
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFV 54
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 324
++VGG++ +++++ HFG YG + + + N
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVINRVTN 364
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = -1
Query: 458 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 279
+ G+ + + V LS ET + +L++ F G I I + D T +S+GFAFI F
Sbjct: 173 DGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHR 232
Query: 278 ESIDKVMALVN 246
E + + +++
Sbjct: 233 EDAARAIEVLS 243
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 353 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = -1
Query: 437 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
+ + ++G LS+ ++ L + F ++ + V TD TGR RGF F+ +A ++
Sbjct: 81 EHRCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLEAKKT 134
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
+D +++VG L + +K+L D F YG I +++K G FAF+ F+ P +
Sbjct: 259 NDCRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKN--RRGAGPPFAFVEFEDPRDAE 314
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = -1
Query: 521 RQPAYGNAENGGGDSQDHNSAEAPGRDDDRKLF-VGGLSWETTDKELRDHFGAY--GEIE 351
R+P + GD N + + ++ + + GL +E++ ++L F I+
Sbjct: 303 REPRERERQRARGDHNSDNGSNSQDQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASID 362
Query: 350 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+ K+ N G++ G AF+VFK+ K + +
Sbjct: 363 LLKHKSGKNQGKNTGVAFVVFKSNNDASKALKM 395
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
++F+G + + + EL GEI ++ DP TG ++GFAF F S + +
Sbjct: 154 EVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITT 213
Query: 251 VN 246
+N
Sbjct: 214 LN 215
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 339
DDRKLFVG +S +++LR F +G IE + V
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFGTIEELTV 245
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 467 NSAEAPGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 309
N RD + KLFVG + +K+LR F YG+I + + D TG+ +
Sbjct: 158 NGGTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = -1
Query: 452 PGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KA 282
PG D+ + L+V + + + E R F AYG I + + D +TG +G F+++ K
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKK 184
Query: 281 PESIDKVMALVNT 243
E+ + +L T
Sbjct: 185 AEAQAAISSLSGT 197
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 12
F + G + +V++ +D + Q KGFCF+T +++ + ++T
Sbjct: 295 FGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L V + + TD+ R F A + + + +G S GF F+ + E K + +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 248 NTPSTTRK*TQRRLKHDMGRFLSEDSA----VKSQMMKSE--TSFSEFGTILEVEMPFDK 87
N + K + G + + Q+ ++E +F +G I+ + DK
Sbjct: 109 NGFTIGNKVLKVAFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDK 168
Query: 86 TKNQRKGFCFITFESE 39
+ KG F+ ++ +
Sbjct: 169 STGLPKGCGFVLYDKK 184
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 437 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 333
DR +FVG L K L+ +F YGE+ES+ ++
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGEVESVRFRS 54
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 34.3 bits (75), Expect = 0.083
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMA 255
++F+G + + + EL F G I + DP +G ++GFAF F E+ + V
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKK 212
Query: 254 LVNTPSTTRK*TQRRLKHDMGR-FLSEDSAVKSQMMKSETSFSEFGTILE---VEMPFDK 87
L N K + R F+ KS+ E FS+ L+ V + D+
Sbjct: 213 LDNKEIRPGKRLGVCISVANSRLFVGSIPKTKSKQEILE-EFSKVTNGLDDVIVYLSADQ 271
Query: 86 TKNQRKGFCFITFESEQVVN 27
K + +GF F+ +ES Q +
Sbjct: 272 -KGKNRGFAFLEYESHQAAS 290
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
K+FVG + ++ +EL+D FG +G++ + D RS+G
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
++FVG + + + EL F G I + + D N G++RG+AF+V+ + + + +
Sbjct: 75 EVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSKDDAKRCVKT 133
Query: 251 VN 246
+N
Sbjct: 134 LN 135
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 288
R + K+++G L + +E+ + FG YG ++ + V +P GFAF +F
Sbjct: 28 RAEMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNP-----PGFAFCIF 75
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 365 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 125 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 365 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 125 FGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
+G I+ V + DK ++KGFCF+ +E ++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_19711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = -1
Query: 491 GGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS 312
GGG N + G+D L + L +K+L++ YG + N++ D N G S
Sbjct: 104 GGGGGGMENDVASDGKD----LIIQNLPKGIQEKDLKELLQLYGNVLVCNIERDSN-GDS 158
Query: 311 RGFAFIVFKAPESIDKVMALVNTPSTTRK*T 219
G A + F S+ +++ ST + T
Sbjct: 159 SGSALVRFFRATSLQIPWRIIDKVSTRSRGT 189
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -1
Query: 482 DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGF 303
+++D + E G+ LFVG L ++ T +++ DHF G S + T S+G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNSSKGC 116
Query: 302 AFI 294
F+
Sbjct: 117 GFL 119
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
K++ G L T+K+L + +G++ ++ K G+A++VFK + D+ +A
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 251 VN 246
+N
Sbjct: 56 LN 57
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 255
+++G + + E++ F +G + I + + RS+G+AF+ F A + + K+ A
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAA 156
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 33
F +FGT+ + + K + KG+ F+ F ++V
Sbjct: 118 FEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEV 151
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 32.3 bits (70), Expect = 0.34
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = -1
Query: 536 TRYYHRQPAYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 357
TR RQ AE G H+ E ++ L V GLS TT+++LR F YG
Sbjct: 148 TRGLARQTHTTRAEGGEIHLTRHSLTEKDTKEIGC-LGVFGLSLYTTERDLRPVFEKYGP 206
Query: 356 IESINVKTD 330
+E+I + D
Sbjct: 207 VEAIQIVYD 215
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
R +F+GGL + + + F GEI SI + +R F + F A ES+D
Sbjct: 351 RTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGE-NARKFCHLRFGAKESVD 405
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 330
++++G L + TT+ ++R F +YG + IN+K +
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYG-EIESINVKTDPNTG-------RSRGFAFIVFK 285
D K++ G L ++ T EL+ F A + + + +P RSRGF F+ F
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 284 APESIDKVMALVN 246
PE + +N
Sbjct: 108 NPEDAQTAVKSLN 120
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
G R++ GL+ K L++ YG I++I V DP T +RG
Sbjct: 135 GTPPQREVLFSGLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -1
Query: 428 LFVGGLSWETTDKE-LRDHFGAYGEIESINV 339
L+VGGL+ T +E L + FG +GEIE I +
Sbjct: 249 LYVGGLTLHTKLEEWLWEEFGEWGEIEDIRI 279
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -1
Query: 140 TSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
++F ++GTI +V + DK + +G C++ F
Sbjct: 41 SAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 392 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 288
+++R F YG IE + V D T +RG ++ F
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAY--GEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKVM 258
LF + +TD ++ HF Y E+ ++N+K D + R RG FI S +K+
Sbjct: 167 LFYARIVMYSTDASVKMHFNKYSGAEMNNVNIKRDIDELRLERGLTFIDKALKISAEKLF 226
Query: 257 ALVNTPSTTRK 225
N RK
Sbjct: 227 TEKNGMRLNRK 237
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+LFVG LS ET ++L + F YG++ ++KT + FI ++ P ++ M
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT--------AYGFIEYEDPRDAEEAMRR 58
Query: 251 VN 246
N
Sbjct: 59 EN 60
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 95 FDKTKNQRKGFCFITFESE 39
FDK + +GF F+TFESE
Sbjct: 4 FDKATQRHRGFGFVTFESE 22
>SB_15012| Best HMM Match : zf-CCHC (HMM E-Value=1.1e-05)
Length = 410
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 357
DH AP +L V GL WE D++L YGE
Sbjct: 69 DHLLQVAPAEVSRARLQVHGLPWEVPDEDLVALLSPYGE 107
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 432 SVVIASWGLSTVMILRITATVLCISISWLSVVI 530
++++ S G++ L ITAT+LC SIS L +I
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLLYPLI 299
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 494 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 333
NGG + D + A R++ +LFV GL E ++ +LR+ + I+ + +KT
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE-IASVPVIDHVFMKT 655
>SB_45709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +1
Query: 13 VLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKIVPNSLKEVSDFII*DFTAESSDKNL 192
V +K TT S+ + F F VL +ST K P+ +K F+I + N+
Sbjct: 6 VSAKRITTWSNRIRYARACFACFDVLVLHVSTRK--PSKIKHRGSFLIRKSREKEFRSNV 63
Query: 193 PMSCFSLLWVYFLVVDGVFTRAMT 264
P CF+ + V G T T
Sbjct: 64 PAVCFNAIINAVFKVAGDVTTGTT 87
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 339
D + EA R++ R ++VG +S ET ++ F YG IE + V
Sbjct: 358 DRSFREA-SREERRIVYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = -1
Query: 521 RQPAYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESIN 342
+Q + +GG S ++ + P ++L V + + D +LR FG++G I +
Sbjct: 44 QQQQAASPADGGSPSAENGDSSGP-----KRLHVTNIPFRFRDNDLRQMFGSFGVIADVE 98
Query: 341 V 339
+
Sbjct: 99 I 99
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = -2
Query: 364 TVK*RVLM*RQ--IQTQADHEGLPSLCLRPQSQ*TRSWLW 251
T+K RVLM R+ ++ A+H+ P + L P R+W+W
Sbjct: 1702 TLKCRVLMRRENVLKICANHQITPVMHLEPMRGCDRAWVW 1741
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 479 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRDHFGAYGEI 354
S DHN +PG DD +R++ L ++ + E+R Y EI
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRLAAVLYTEI 155
>SB_25359| Best HMM Match : p450 (HMM E-Value=0)
Length = 1084
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 374 NDHGAPYLWSPSSAHQQKVFCRHRVLGPQHCYDLANHRHRSLHFHKLVVGGNILCKI 544
++ G P L+ P A Q ++ CR + LG + L ++H S+ + L+ I+ ++
Sbjct: 505 HNFGPPVLFEPQKA-QPQLSCRIKTLGTRLASILIVYKHMSVIQNNLINQSKIILRV 560
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP-----------NTGRS-RGF 303
R D+ LFV + T ++ FG G ++S+ + P NT +GF
Sbjct: 38 RPSDKTLFVINVPPYCTKLAIKKLFGKCGGVKSVYLHKQPGKVKETKTSLLNTDNEVKGF 97
Query: 302 --AFIVFKAPESIDKVMAL 252
A++VFK P S+D + L
Sbjct: 98 KVAYVVFKKPSSLDAALKL 116
>SB_42811| Best HMM Match : SRCR (HMM E-Value=0)
Length = 854
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -1
Query: 230 RK*TQRRLKHDMGRFLSE---DSAVKSQMMKSETSFSEFGTILEVEMPFDKTKNQRKGFC 60
+K ++ K D+ L++ D K S S + ++ VE P TKN GF
Sbjct: 665 KKWNPKKFKSDIAETLNKYCKDCLEKRARRDSPPSEFKADDVVIVEDPATSTKNSPPGFL 724
Query: 59 FITFESEQVVND 24
+ F + ND
Sbjct: 725 LVVFAVVKTTND 736
>SB_38223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 392 YLWSPSSAHQQKVFCRHRVLGPQH 463
YLW+PS Q +V R+R G H
Sbjct: 143 YLWTPSGLSQSQVRSRNRANGTTH 166
>SB_14896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 509 YGNAENGGGDSQDHNSAEAPGRDDD 435
YG+ + G GD D N + G DDD
Sbjct: 88 YGDDDYGDGDDDDDNGDDDGGDDDD 112
>SB_43316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 320 LCLDLSLH*YSLFHRMLQNDHGAPYLWSPSSAHQQKV 430
L +D LH Y F+R L D+ A Y W S +++V
Sbjct: 153 LIVDTGLH-YQGFNRSLALDYFAKYAWDTSDGAEKEV 188
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGE--IESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
RK+FVGGL + + E+ F +G ++ + + +G+AF+++ S+ K+
Sbjct: 344 RKVFVGGLPPDIDEDEIHASFCRFGSLTVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
Query: 260 MA 255
++
Sbjct: 404 IS 405
>SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38)
Length = 719
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 127 SLKEVSDFII*DFTAESSDKNLPMSCFSLL-WVYFLVVDGVFTRAMTLSI 273
S++++SD I+ F+ KNLP C+ + WV + + V + MTL I
Sbjct: 345 SIRQISDRILNWFSTIMESKNLPSFCWPYVDWVEYASDNAV--KVMTLYI 392
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,749,089
Number of Sequences: 59808
Number of extensions: 402972
Number of successful extensions: 1268
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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