Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00082
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 98 5e-21
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 98 5e-21
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 87 7e-18
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 87 7e-18
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 76 2e-14
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 76 2e-14
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 76 2e-14
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 59 3e-09
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 58 7e-09
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 54 1e-07
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 54 1e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 53 1e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 8e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 51 8e-07
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 4e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 48 4e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 4e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 46 2e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 9e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 9e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 1e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 1e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 43 2e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 5e-04
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 41 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 8e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.001
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.001
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 40 0.001
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 40 0.001
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 39 0.003
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 39 0.003
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 39 0.003
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 39 0.003
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.008
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.008
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 38 0.008
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.008
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.008
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.010
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 36 0.018
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 34 0.097
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 32 0.30
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 32 0.30
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.52
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.52
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 0.52
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.52
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 0.52
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 31 0.69
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical pr... 28 4.8
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 4.8
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF101307-3|AAC69212.2| 315|Caenorhabditis elegans Hypothetical ... 27 8.4
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 97.9 bits (233), Expect = 5e-21
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 270
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 269 DKVM---------ALVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGT 117
DKV+ ++ K TQ +L + + S + + F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 116 ILEVEMPFDKTKNQRKGFCFITFESEQVVN 27
+ + + FDK + +GF F+TF+S++V +
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVAD 189
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 258 GSGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 133
G E +N D GK+F+GGLS + + + +R++F
Sbjct: 24 GHEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYF 65
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 97.9 bits (233), Expect = 5e-21
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 270
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 269 DKVM---------ALVNTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGT 117
DKV+ ++ K TQ +L + + S + + F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 116 ILEVEMPFDKTKNQRKGFCFITFESEQVVN 27
+ + + FDK + +GF F+TF+S++V +
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVAD 189
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 258 GSGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 133
G E +N D GK+F+GGLS + + + +R++F
Sbjct: 24 GHEEARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYF 65
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 87.4 bits (207), Expect = 7e-18
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Frame = -1
Query: 512 AYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 333
A N NG + + ++D+K+FVGG+S E +++L HF YGE+ VK
Sbjct: 3 ATDNKINGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY 62
Query: 332 DPNTGRSRGFAFIVFKAPESIDKVMALVNTPSTTRK*TQRRLKHDMGR--FLSE-DSAVK 162
D GRSRGFAF+ F E +A + + K + F+ S
Sbjct: 63 DRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYS 122
Query: 161 SQMMKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
Q ++S F +FG + ++E PFDK R+ F FI FE E+
Sbjct: 123 EQDLRSH--FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 260 MALVNTPSTTRK 225
+ TR+
Sbjct: 168 SSQTKQTFGTRE 179
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 87.4 bits (207), Expect = 7e-18
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Frame = -1
Query: 512 AYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 333
A N NG + + ++D+K+FVGG+S E +++L HF YGE+ VK
Sbjct: 3 ATDNKINGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY 62
Query: 332 DPNTGRSRGFAFIVFKAPESIDKVMALVNTPSTTRK*TQRRLKHDMGR--FLSE-DSAVK 162
D GRSRGFAF+ F E +A + + K + F+ S
Sbjct: 63 DRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYS 122
Query: 161 SQMMKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
Q ++S F +FG + ++E PFDK R+ F FI FE E+
Sbjct: 123 EQDLRSH--FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 260 MALVNTPSTTRK 225
+ TR+
Sbjct: 168 SSQTKQTFGTRE 179
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 76.2 bits (179), Expect = 2e-14
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 320 GRSRGFAFIVFKAPESIDKVMA----LVNTPST-TRK*TQRRLKHDMGRFLSEDSAVKSQ 156
RSRGF F+ F +D M +++ + ++ R K+ +S S
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 155 MMKSETS------FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 27
+ + T F+++GT+ + E+ DK + +GF F+TF+ V+
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 76.2 bits (179), Expect = 2e-14
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 320 GRSRGFAFIVFKAPESIDKVMA----LVNTPST-TRK*TQRRLKHDMGRFLSEDSAVKSQ 156
RSRGF F+ F +D M +++ + ++ R K+ +S S
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 155 MMKSETS------FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 27
+ + T F+++GT+ + E+ DK + +GF F+TF+ V+
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 76.2 bits (179), Expect = 2e-14
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 320 GRSRGFAFIVFKAPESIDKVMA----LVNTPST-TRK*TQRRLKHDMGRFLSEDSAVKSQ 156
RSRGF F+ F +D M +++ + ++ R K+ +S S
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 155 MMKSETS------FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 27
+ + T F+++GT+ + E+ DK + +GF F+TF+ V+
Sbjct: 121 VREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 170
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 43 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
KIFVGGL+S +DD +R F+
Sbjct: 24 KIFVGGLTSNTTDDLMREFY 43
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
K+F+GGLS + +D+++ N+F
Sbjct: 50 KLFIGGLSHDTTDEQLGNYF 69
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
K+F+GGLS + +D+++ N+F
Sbjct: 70 KLFIGGLSHDTTDEQLGNYF 89
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
K+F+GGLS + +D+++ N+F
Sbjct: 71 KLFIGGLSHDTTDEQLGNYF 90
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -1
Query: 464 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 284 APESIDKVMALVNTPSTTRK 225
ES+ + L T RK
Sbjct: 96 KLESVQLALVLSGTMFRNRK 115
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 57.6 bits (133), Expect = 7e-09
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = -1
Query: 479 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
+Q N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 305 FAFIVFKAPESIDK 264
+ F+ K S ++
Sbjct: 78 YGFVTMKDRASAER 91
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = -1
Query: 386 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA----LVNTPST-TRK* 222
+R+ + +GEI I V DP T RSRGF F+ F +D M +++ + ++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 221 TQRRLKHDMGRFLSEDSAVKSQMMKSETS------FSEFGTILEVEMPFDKTKNQRKGFC 60
R K+ +S S + + T F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 59 FITFESEQVVN 27
F+TF+ V+
Sbjct: 121 FVTFDDHDSVD 131
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Frame = -1
Query: 386 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA----LVNTPST-TRK* 222
+R+ + +GEI I V DP T RSRGF F+ F +D M +++ + ++
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 221 TQRRLKHDMGRFLSEDSAVKSQMMKSETS------FSEFGTILEVEMPFDKTKNQRKGFC 60
R K+ +S S + + T F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 59 FITFESEQVVN 27
F+TF+ V+
Sbjct: 121 FVTFDDHDSVD 131
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 5 YSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 53.2 bits (122), Expect = 1e-07
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 266 KVMALVN------TPSTTRK*TQRRLKHDMGR--FLSE-DSAVKSQMMKSETSFSEFGTI 114
+ ++N P K + D+G F+ D V +++ +FS FG I
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYD--TFSAFGVI 126
Query: 113 LEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
L+V ++ D KGF FI F S + + L+
Sbjct: 127 LQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -1
Query: 464 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 288
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 287 KAPESIDKVMALVN 246
+ E+ D + +N
Sbjct: 150 ASFEASDTALEAMN 163
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 53.2 bits (122), Expect = 1e-07
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 266 KVMALVN------TPSTTRK*TQRRLKHDMGR--FLSE-DSAVKSQMMKSETSFSEFGTI 114
+ ++N P K + D+G F+ D V +++ +FS FG I
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYD--TFSAFGVI 136
Query: 113 LEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
L+V ++ D KGF FI F S + + L+
Sbjct: 137 LQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = -1
Query: 464 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 288
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 287 KAPESIDKVMALVN 246
+ E+ D + +N
Sbjct: 160 ASFEASDTALEAMN 173
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = -1
Query: 506 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 327
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 326 NTGRSRGFAFIVFKAPE 276
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITF 48
F EFG I + ++ +D+ +GF FI F
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 248 N 246
N
Sbjct: 67 N 67
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE + +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTDM 403
Query: 248 NT 243
N+
Sbjct: 404 NS 405
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 248 N------TPS----TTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGTILEVEM 99
N P + R RR + + D + ++ + +FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYD--TFSLFGNILSCKV 176
Query: 98 PFDKTKNQRKGFCFITFESE 39
D N KG+ F+ FE+E
Sbjct: 177 ATDDEGNS-KGYGFVHFETE 195
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.8 bits (116), Expect = 8e-07
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE + +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAAVTDM 403
Query: 248 NT 243
N+
Sbjct: 404 NS 405
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 248 N------TPS----TTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSETSFSEFGTILEVEM 99
N P + R RR + + D + ++ + +FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYD--TFSLFGNILSCKV 176
Query: 98 PFDKTKNQRKGFCFITFESE 39
D N KG+ F+ FE+E
Sbjct: 177 ATDDEGNS-KGYGFVHFETE 195
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = -1
Query: 467 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 293 VF 288
+
Sbjct: 150 EY 151
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 255
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 254 LVN 246
+N
Sbjct: 267 GMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 255
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 254 LVN 246
+N
Sbjct: 267 GMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.8 bits (116), Expect = 8e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 255
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 254 LVN 246
+N
Sbjct: 267 GMN 269
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = -1
Query: 458 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 279
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 278 ESIDKVM 258
+ +K +
Sbjct: 77 DGANKAI 83
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 164 KSQMMKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
KSQ+ E F +G+I V M +D +GF ITF+S+ N ++
Sbjct: 38 KSQL---EHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS 91
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = -1
Query: 503 NAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPN 324
N + SQ + E D + ++VG + + T +E+ HF G + + ++ D
Sbjct: 55 NTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRF 114
Query: 323 TGRSRGFAFIVFKAPESIDKVMALVNT 243
+G +GFA++ F E + +A+ ++
Sbjct: 115 SGHPKGFAYVEFTEKEGMQNALAMTDS 141
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Frame = -1
Query: 509 YGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTD 330
YG GD Q H+S + L++ GL T D LR+ YG I S D
Sbjct: 60 YGRYTAPRGDQQHHDSTPLSSTN----LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMD 115
Query: 329 PNTGRSRGFAFIVFKAPESIDKVMALVNTPSTTRK*TQ-RRLKHDMGRFLSEDSAVKSQM 153
T +G+ F+ F++P++ + +NT + + ++ + D + +
Sbjct: 116 KATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTE 175
Query: 152 MKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
ET ++FG ++ + NQ +G F +S++
Sbjct: 176 QMLETELNKFGMVISTRI-LRTPDNQSRGVGFARMDSKE 213
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -1
Query: 437 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLA 304
Query: 260 MAL 252
+++
Sbjct: 305 LSM 307
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 249 EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRNFF 133
+H I KV KK + + IFVG L EI++D + FF
Sbjct: 227 DHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALITFF 266
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 293 VFKAPESIDKVMALVNTPSTTRK 225
F+ PE + +N+ K
Sbjct: 363 CFEKPEEATSAVTEMNSKMVCSK 385
Score = 44.0 bits (99), Expect = 9e-05
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 248 NTPSTTRK*TQ---RRLKHDMGRFLSEDSAVKS--QMMKSET---SFSEFGTILEVEMPF 93
N + K + + M R + + +K+ +++ +++ +FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 92 DKTKNQRKGFCFITFESEQVVNDLLK 15
D+ KG+ F+ FE+E+ + ++
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQ 178
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 374 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
F +G I S V T G+S+GF F+ F PE +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAE 266
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 293 VFKAPESIDKVMALVNTPSTTRK 225
F+ PE + +N+ K
Sbjct: 303 CFEKPEEATSAVTEMNSKMVCSK 325
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 248 N 246
N
Sbjct: 94 N 94
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 374 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
F +G I S V T G+S+GF F+ F PE +
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAE 206
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 293 VFKAPESIDKVMALVNTPSTTRK 225
F+ PE + +N+ K
Sbjct: 300 CFEKPEEATSAVTEMNSKMVCSK 322
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 374 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
F +G I S V T G+S+GF F+ F PE +
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAE 203
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 293 VFKAPESIDKVMALVNTPSTTRK 225
F+ PE + +N+ K
Sbjct: 363 CFEKPEEATSAVTEMNSKMVCSK 385
Score = 44.0 bits (99), Expect = 9e-05
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 248 NTPSTTRK*TQ---RRLKHDMGRFLSEDSAVKS--QMMKSET---SFSEFGTILEVEMPF 93
N + K + + M R + + +K+ +++ +++ +FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 92 DKTKNQRKGFCFITFESEQVVNDLLK 15
D+ KG+ F+ FE+E+ + ++
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQ 178
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 374 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
F +G I S V T G+S+GF F+ F PE +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAE 266
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/61 (29%), Positives = 36/61 (59%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F + + +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 248 N 246
N
Sbjct: 68 N 68
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L + L T +E+R F + GEIES + D TG+S G+ F+ + E + ++
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 248 N---TPSTTRK*TQRRLKHDM--GRFLSEDSAVKSQMM-KSETSFSEFGTILEVEMPFDK 87
N + T K + R +D G L KS + + E+ F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 86 TKNQRKGFCFITFESEQVVNDLLKT 12
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D + +
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTL 189
Query: 248 N 246
N
Sbjct: 190 N 190
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 293 VFKAPESIDKVMAL 252
+K +D MA+
Sbjct: 170 KYK--HGLDAHMAI 181
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = -1
Query: 473 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 294
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 293 VFKAPESIDKVMAL 252
+K +D MA+
Sbjct: 170 KYK--HGLDAHMAI 181
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 255
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Query: 254 LVN 246
+ N
Sbjct: 69 IDN 71
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 137 SFSEFGTILEVEMPFDKTKNQRKGFCFITFE 45
+F FG ++ + +P D + +GF F+ F+
Sbjct: 30 AFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 260 MAL 252
+AL
Sbjct: 83 LAL 85
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -1
Query: 455 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 276
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 275 SIDKVMALVN 246
K +N
Sbjct: 179 DAQKSCEQLN 188
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 260 MAL 252
+AL
Sbjct: 228 LAL 230
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -1
Query: 455 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 276
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 275 SIDKVMALVN 246
K +N
Sbjct: 324 DAQKSCEQLN 333
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = -1
Query: 446 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 266 KVMALVN 246
+ +A +N
Sbjct: 232 RAIAELN 238
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFES 42
F + G ++ + + DK KGF F+TFES
Sbjct: 196 FGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 248 N 246
N
Sbjct: 84 N 84
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 201 RHGKIFVGGLSSEISDDEIRNFFQ 130
RH +FVG LSSE+ + ++R FQ
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQ 43
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 248 N 246
N
Sbjct: 94 N 94
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 201 RHGKIFVGGLSSEISDDEIRNFFQ 130
RH +FVG LSSE+ + ++R FQ
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQ 53
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 248 N 246
N
Sbjct: 197 N 197
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 201 RHGKIFVGGLSSEISDDEIRNFFQ 130
RH +FVG LSSE+ + ++R FQ
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQ 156
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ + +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 248 N 246
N
Sbjct: 165 N 165
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 201 RHGKIFVGGLSSEISDDEIRNFFQ 130
RH +FVG LSSE+ + ++R FQ
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQ 124
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 288
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -1
Query: 518 QPAYGNAENGGGDSQDHNSAEAPGRD---DDRKLFVGGLSWETTDKELRDHFGAYGEIES 348
+P + E G + + E R+ + +LF+ L + T + +L+ F YGE+
Sbjct: 248 EPEHEVIEEHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSE 307
Query: 347 INVKTDPNTGRSRGFAFIVFKAPES 273
+ V D TG +GFA + F PE+
Sbjct: 308 VQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 251 VN 246
N
Sbjct: 63 SN 64
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = -1
Query: 479 SQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
SQ S+ L++ GL T D LR+ YG I S D T +G+
Sbjct: 92 SQHRASSNFNTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYG 151
Query: 299 FIVFKAPESIDKVMALVNTPSTTRK*TQ-RRLKHDMGRFLSEDSAVKSQMMKSETSFSEF 123
F+ F++P++ + +NT + + ++ + D + + ET ++F
Sbjct: 152 FVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKF 211
Query: 122 GTILEVEMPFDKTKNQRKGFCFITFESEQ 36
G ++ + NQ +G F +S++
Sbjct: 212 GMVISTRI-LRTPDNQSRGVGFARMDSKE 239
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++ L
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEIRKL 125
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKR 3
F +F + +V+M Q KG+ FITFE+E ++ K TPK+
Sbjct: 86 FEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTPKQ 129
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++ L
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEIRKL 126
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKR 3
F +F + +V+M Q KG+ FITFE+E ++ K TPK+
Sbjct: 87 FEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKLTPKQ 130
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 260 MAL 252
+ +
Sbjct: 113 LVM 115
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 320 GRSRGFAFIVF 288
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = -1
Query: 500 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 321
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 320 GRSRGFAFIVF 288
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -1
Query: 449 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 288
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = -1
Query: 470 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 305 FAFIVFKAPESIDKVMALVN 246
+ F+ F ++ + +A +N
Sbjct: 178 YGFVSFPNKQNAENAIAGMN 197
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 260 MALVN 246
+ +N
Sbjct: 289 IMEMN 293
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/50 (32%), Positives = 33/50 (66%)
Frame = -1
Query: 185 LSEDSAVKSQMMKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 36
LS+D V ++++KS +F++FG + E ++ D + KG+ F++F ++Q
Sbjct: 142 LSKD--VSNELLKS--TFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 261
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 260 MAL 252
+ +
Sbjct: 119 LVM 121
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -1
Query: 446 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F+
Sbjct: 162 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = -1
Query: 434 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 342
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -1
Query: 446 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F+
Sbjct: 162 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 216
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = -1
Query: 434 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 342
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -1
Query: 446 RDDD---RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+DDD R LFVG + + ++E+R F +G++E +++KT NT +AF++F+
Sbjct: 139 QDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQ 193
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = -1
Query: 434 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 342
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 41.1 bits (92), Expect = 6e-04
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Frame = -1
Query: 455 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVF--- 288
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 287 -KAPESI--DKVMALVNTPSTTRK*TQRRLKHDMGRFLSEDSA----VKSQMMKSETS-- 135
KA +++ D+V + ++R+ L + V Q E
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESE 39
FS+FGT+ V K + KG F+ F++E
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTE 733
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = -1
Query: 482 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
D + ++ AP R + + FV + E T+ ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 305 FAFIVF----KAPESIDK 264
+A + + +A E+ID+
Sbjct: 98 YALVEYETQKEANEAIDQ 115
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 18
FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 75 FSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 263 VMALVN 246
+A +N
Sbjct: 347 AIAGLN 352
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ + +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 248 N 246
N
Sbjct: 194 N 194
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 263 VMALVN 246
+A +N
Sbjct: 347 AIAGLN 352
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 263 VMALVN 246
+A +N
Sbjct: 322 AIAGLN 327
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 263 VMALVN 246
+A +N
Sbjct: 325 AIAGLN 330
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 416 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNAL 60
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 416 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 258
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNAL 60
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 306
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF 288
F+ F
Sbjct: 100 FVTF 103
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITF 48
F ++G++ + DK+ KG CF+TF
Sbjct: 75 FEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 39.1 bits (87), Expect = 0.003
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 8/180 (4%)
Frame = -1
Query: 536 TRYYHRQPAYGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGE 357
T Y + G + GG A P +++VG + + + L F G+
Sbjct: 167 TTGYTIEVTIGQRKFGGPPPDWEGPATGPA-GQGHEIYVGHIPTDVFEDTLVPLFEKSGK 225
Query: 356 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALVNTPSTTRK*TQRRLKHDMG----- 192
I + + DP +G SRG+AF+ + E A T T + LK ++
Sbjct: 226 IWDLRLMMDPMSGASRGYAFVTYCNKED---AAAAAKTYDGHEISTGKPLKVNVSIANTR 282
Query: 191 RFLSEDSAVKSQ---MMKSETSFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 21
F+ KS+ + + +T ++ +P D K + +GFCF+ F + +D+
Sbjct: 283 LFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -1
Query: 452 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 272 IDKVMALVN 246
+K A ++
Sbjct: 103 CEKARAALH 111
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -1
Query: 452 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 273
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 272 IDKVMALVN 246
+K A ++
Sbjct: 103 CEKARAALH 111
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Frame = -1
Query: 512 AYGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI--- 345
A G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 85 ADGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILP 144
Query: 344 --NVKTD-----PNTGRSRGFAFIVFKAPESIDK 264
KT P R+ G A I FK E D+
Sbjct: 145 REEKKTSVFGTLPKHSRNCGTATITFKKSEHADR 178
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 37.5 bits (83), Expect = 0.008
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Frame = -1
Query: 473 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 300
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 299 FIVF-KAPESIDKVMALVNTP-------STTRK*TQRRLKHDMGRFLSEDSAVKSQMMKS 144
F+ F ++I+ AL N K +++ F+ + S ++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLR 159
Query: 143 ETSFSEFGTILEVEMPFDKTKNQRKGFCFITF 48
E F++FG I + + D+ R G F+TF
Sbjct: 160 EI-FAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYG 360
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -1
Query: 437 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 285
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V++
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVYE 65
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/96 (26%), Positives = 46/96 (47%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++ +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 248 NTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSE 141
+ RR+ D + +S++ K + + E
Sbjct: 303 DNVLI----DDRRIHVDFSQSVSQNYKYKPKSQQQE 334
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/96 (26%), Positives = 46/96 (47%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++ +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 248 NTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSE 141
+ RR+ D + +S++ K + + E
Sbjct: 303 DNVLI----DDRRIHVDFSQSVSQNYKYKPKSQQQE 334
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/96 (26%), Positives = 46/96 (47%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++ +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 248 NTPSTTRK*TQRRLKHDMGRFLSEDSAVKSQMMKSE 141
+ RR+ D + +S++ K + + E
Sbjct: 234 DNVLI----DDRRIHVDFSQSVSQNYKYKPKSQQQE 265
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.097
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 279
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = -1
Query: 521 RQPAYGNAENGGGDSQDHNSAEAP--GRDDDRKLFVGGLSWETTDKELRDHFG---AYGE 357
R PAYG+ GD +H+S+ P G D R G T G AYG
Sbjct: 845 RTPAYGSKTPAYGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGS 904
Query: 356 IESINVKTDPNTGRSRGFAFIVFKAP 279
+++ ++GR+ G+ + + P
Sbjct: 905 MDNSRTPAYDDSGRTPGYESMPSRTP 930
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical protein
K08E4.1 protein.
Length = 1208
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = -1
Query: 521 RQPAYGNAENGGGDSQDHNSAEAP--GRDDDRKLFVGGLSWETTDKELRDHFG---AYGE 357
R PAYG+ GD +H+S+ P G D R G T G AYG
Sbjct: 845 RTPAYGSKTPAYGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGGRTPAYGS 904
Query: 356 IESINVKTDPNTGRSRGFAFIVFKAP 279
+++ ++GR+ G+ + + P
Sbjct: 905 MDNSRTPAYDDSGRTPGYESMPSRTP 930
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = -1
Query: 440 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 285
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -1
Query: 428 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMALV 249
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E D +AL
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE--DAELALQ 96
Query: 248 NTPST 234
N +T
Sbjct: 97 NISNT 101
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = -1
Query: 521 RQPAYGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIE 351
R+ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 141 RRKVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVV 200
Query: 350 SINVKTDPNTGRSRGFAFIVFKAPESIDKVMAL 252
+K + G S+GF F+ + +KV+A+
Sbjct: 201 FCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAI 232
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = -1
Query: 449 GRDDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 279
GR ++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 278 ESIDKVMA 255
E+ +++++
Sbjct: 313 EAAERIVS 320
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = -1
Query: 488 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 309
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 308 GFAFIVFKAPESIDKVMALVN 246
GF F+ + P+ D+ A N
Sbjct: 140 GFGFVTMQNPDDADRARAEFN 160
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = -1
Query: 488 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 309
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 308 GFAFIVFKAPESIDKVMALVN 246
GF F+ + P+ D+ A N
Sbjct: 140 GFGFVTMQNPDDADRARAEFN 160
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -1
Query: 440 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 263 VM 258
++
Sbjct: 87 LL 88
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -1
Query: 425 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 258
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
Query: 257 ALVNT 243
++ T
Sbjct: 147 EILPT 151
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 443 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 267
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 266 KVMA 255
+ ++
Sbjct: 422 RAIS 425
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = -1
Query: 434 RKLFVGGLSWETTDKELRDHFGAYGEI 354
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 339 FSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 273
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 272 IDKVMA 255
+ K+M+
Sbjct: 266 VIKLMS 271
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 339 FSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 273
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 272 IDKVMA 255
+ K+M+
Sbjct: 266 VIKLMS 271
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 125 FSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 134 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 15
FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 339 FSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = -1
Query: 431 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPES 273
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 272 IDKVMA 255
+ K+M+
Sbjct: 266 VIKLMS 271
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 31.1 bits (67), Expect = 0.69
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = -1
Query: 428 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 264
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER 289
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 0.69
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Frame = -1
Query: 440 DDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFI 294
++RK+++GG++ E + E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 293 VFK 285
+
Sbjct: 384 TMR 386
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 4 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 117
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = -1
Query: 509 YGNAENGGGDSQDHNSAEAPGRDDDR---KLFVGGLSWETTDKELRDHFGAYGEIESIN- 342
YG + N+ +P + + + +G + WE K+++D F +YG I+
Sbjct: 37 YGQETENTRQRSNSNAGGSPDEQNPQFGMQAQLGKMMWEAGSKQVQDTFQSYGRIDLFRP 96
Query: 341 -VKTDPNTGRSRGFAFIVFKAPESI 270
DP R+R + + P I
Sbjct: 97 YFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 110 EVEMPFDKTKNQRKGFCFITFESEQVVN 27
++ + D+ KGF ++TFE+EQ +N
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMN 67
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 339 YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 497
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>Z78067-9|CAB01528.2| 450|Caenorhabditis elegans Hypothetical
protein ZC412.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 372 KMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISISW 515
+ I +++C L PT + FSV+I+SW L + I R + V + W
Sbjct: 93 RWIFGIIMCKLV--PTCQAFSVLISSWSLCYIAIDRYRSIVTPLREPW 138
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 192 KIFVGGLSSEISDDEIRNFF 133
K+FVGGL S + + +I NFF
Sbjct: 89 KVFVGGLPSCVKESDILNFF 108
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 375 MITELLICGLPAQPTNKKFSVVIASWGLS-----TVMILRITATVLCISISWLSVVISCA 539
+I+ +C + +++K +V + WGL+ TV + T +C + +
Sbjct: 275 LISTYFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAHLDLSTTTWGSE 334
Query: 540 KLSLLAMTKITPXXXXXTKTMVYTRPS 620
+A+ T+++VYT PS
Sbjct: 335 VYPYIALIMGLENTLCITRSVVYTSPS 361
>AF101307-3|AAC69212.2| 315|Caenorhabditis elegans Hypothetical
protein F41H8.2 protein.
Length = 315
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 450 WGLSTVMILRITATVLCISISWLSVVISCAKLSL 551
WG+S M+L A VL I+I W V+S K S+
Sbjct: 180 WGISN-MVLGFMAVVLSITIFWKLKVVSKNKSSV 212
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 337 RQIQTQADHEGLPSLCLR 284
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,602,766
Number of Sequences: 27780
Number of extensions: 307038
Number of successful extensions: 1254
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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