Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00081
(747 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK024883-1|BAB15031.1| 386|Homo sapiens protein ( Homo sapiens ... 111 3e-24
AF126964-1|AAG43247.1| 697|Homo sapiens C3HC4-type zinc finger ... 111 3e-24
AF268387-1|AAK38614.1| 288|Homo sapiens laryngeal carcinoma rel... 108 2e-23
BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa... 37 0.088
AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related prote... 37 0.088
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 31 5.8
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 31 5.8
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 31 5.8
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 31 5.8
AF399519-1|AAK95004.1| 216|Homo sapiens olfactory receptor prot... 30 7.7
AB065747-1|BAC05967.1| 310|Homo sapiens seven transmembrane hel... 30 7.7
>AK024883-1|BAB15031.1| 386|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21230 fis, clone COL00741. ).
Length = 386
Score = 111 bits (267), Expect = 3e-24
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +1
Query: 1 LHDTLHNYLRKHRFCADCKTKVLRAYQLLVEEKEPQKEKGYVGALYGGIKRCLLDKHLHL 180
L +TL YLRKHRFC DCK KVLRAY +L+ E + KEKGY ALY G++ C ++H+H+
Sbjct: 202 LLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHV 261
Query: 181 QAKTDYIAHLIARAEPELLGNHRE 252
+TD+IAHL+ RAEPE G RE
Sbjct: 262 CCETDFIAHLLGRAEPEFAGGRRE 285
Score = 87.0 bits (206), Expect = 6e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 246 QREHAKTLEIAQEEVLICLGICIYERLQRISLRLREEEGTCQTLAAVAVEALYRKFETAV 425
+ HAKT++IAQEEVL CLGI +YERL RI +LR EE T Q L + V+AL + FE V
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTV 343
Query: 426 EHKSGVSKLQLLYDEITQEELTRQ 497
E G+S+L+ L +E ++EE R+
Sbjct: 344 EKVQGISRLEQLCEEFSEEERVRE 367
>AF126964-1|AAG43247.1| 697|Homo sapiens C3HC4-type zinc finger
protein protein.
Length = 697
Score = 111 bits (267), Expect = 3e-24
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +1
Query: 1 LHDTLHNYLRKHRFCADCKTKVLRAYQLLVEEKEPQKEKGYVGALYGGIKRCLLDKHLHL 180
L +TL YLRKHRFC DCK KVLRAY +L+ E + KEKGY ALY G++ C ++H+H+
Sbjct: 202 LLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHV 261
Query: 181 QAKTDYIAHLIARAEPELLGNHRE 252
+TD+IAHL+ RAEPE G RE
Sbjct: 262 CCETDFIAHLLGRAEPEFAGGRRE 285
Score = 87.0 bits (206), Expect = 6e-17
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 246 QREHAKTLEIAQEEVLICLGICIYERLQRISLRLREEEGTCQTLAAVAVEALYRKFETAV 425
+ HAKT++IAQEEVL CLGI +YERL RI +LR EE T Q L + V+AL + FE V
Sbjct: 284 RERHAKTIDIAQEEVLTCLGIHLYERLHRIWQKLRAEEQTWQMLFYLGVDALRKSFEMTV 343
Query: 426 EHKSGVSKLQLLYDEITQEELTRQ 497
E G+S+L+ L +E ++EE R+
Sbjct: 344 EKVQGISRLEQLCEEFSEEERVRE 367
>AF268387-1|AAK38614.1| 288|Homo sapiens laryngeal carcinoma
related protein 1 protein.
Length = 288
Score = 108 bits (259), Expect = 2e-23
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +1
Query: 1 LHDTLHNYLRKHRFCADCKTKVLRAYQLLVEEKEPQKEKGYVGALYGGIKRCLLDKHLHL 180
L +TL YLRKHRFC DCK KVLRAY +L+ E + KEKGY ALY G++ C ++H+H+
Sbjct: 202 LLETLETYLRKHRFCTDCKNKVLRAYNILIGELDCSKEKGYCAALYEGLRCCPHERHIHV 261
Query: 181 QAKTDYIAHLIARAEPELLGNH 246
+TD+IAHL+ RAEPE G +
Sbjct: 262 CCETDFIAHLLGRAEPEFAGGY 283
>BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor-li
protein.
Length = 1219
Score = 36.7 bits (81), Expect = 0.088
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1
Query: 486 VPLE*FHHTAAVVWRPHSCAQQQFRTCGIVPRLQLQQAFGKCLLLPED 343
+P+ T +V W AQ+ ++TCG++PRL L++ LL P+D
Sbjct: 787 IPVPHSSDTHSVAWLAEQAAQRYYQTCGLLPRLTLRKE--GALLAPQD 832
>AB209126-1|BAD92363.1| 897|Homo sapiens I-kappa-B-related protein
variant protein.
Length = 897
Score = 36.7 bits (81), Expect = 0.088
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -1
Query: 486 VPLE*FHHTAAVVWRPHSCAQQQFRTCGIVPRLQLQQAFGKCLLLPED 343
+P+ T +V W AQ+ ++TCG++PRL L++ LL P+D
Sbjct: 646 IPVPHSSDTHSVAWLAEQAAQRYYQTCGLLPRLTLRKE--GALLAPQD 691
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 30.7 bits (66), Expect = 5.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 312 IYERLQRISLRLREEEGT---CQTLAAVAVEALYRKFETAVEHKSGVSKLQLLYDEITQE 482
+ E LQR S L E+ CQ A +AVEA + + H + V LQ +++++
Sbjct: 1047 VQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKM 1106
Query: 483 ELTRQ 497
RQ
Sbjct: 1107 ASVRQ 1111
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 30.7 bits (66), Expect = 5.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 312 IYERLQRISLRLREEEGT---CQTLAAVAVEALYRKFETAVEHKSGVSKLQLLYDEITQE 482
+ E LQR S L E+ CQ A +AVEA + + H + V LQ +++++
Sbjct: 1047 VQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKM 1106
Query: 483 ELTRQ 497
RQ
Sbjct: 1107 ASVRQ 1111
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 30.7 bits (66), Expect = 5.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 312 IYERLQRISLRLREEEGT---CQTLAAVAVEALYRKFETAVEHKSGVSKLQLLYDEITQE 482
+ E LQR S L E+ CQ A +AVEA + + H + V LQ +++++
Sbjct: 1047 VQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKM 1106
Query: 483 ELTRQ 497
RQ
Sbjct: 1107 ASVRQ 1111
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 30.7 bits (66), Expect = 5.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +3
Query: 312 IYERLQRISLRLREEEGT---CQTLAAVAVEALYRKFETAVEHKSGVSKLQLLYDEITQE 482
+ E LQR S L E+ CQ A +AVEA + + H + V LQ +++++
Sbjct: 1047 VQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKM 1106
Query: 483 ELTRQ 497
RQ
Sbjct: 1107 ASVRQ 1111
>AF399519-1|AAK95004.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 ICPQLLAVPSSYAFSVFSVLPLLP-GKFLLSNFIIQQL*FGDPTLV 429
+C +L++VP Y FSV + L G + NF I DP L+
Sbjct: 73 VCVRLISVPYVYGFSVSLICTLWTYGLYFCGNFEINHFYCADPPLI 118
>AB065747-1|BAC05967.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 30.3 bits (65), Expect = 7.7
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 563 ICPQLLAVPSSYAFSVFSVLPLLP-GKFLLSNFIIQQL*FGDPTLV 429
+C +L++VP Y FSV + L G + NF I DP L+
Sbjct: 138 VCVRLISVPYVYGFSVSLICTLWTYGLYFCGNFEINHFYCADPPLI 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,722,807
Number of Sequences: 237096
Number of extensions: 1886858
Number of successful extensions: 4397
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4397
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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