Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00080
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 131 2e-29
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 129 5e-29
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 113 3e-24
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 107 2e-22
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 99 1e-19
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 62 2e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 59 8e-08
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 58 1e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 56 8e-07
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 56 8e-07
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 56 1e-06
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 56 1e-06
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 55 1e-06
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 55 1e-06
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 55 2e-06
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 55 2e-06
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 54 2e-06
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 54 2e-06
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 54 3e-06
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 54 3e-06
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 54 3e-06
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 54 4e-06
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 54 4e-06
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 54 4e-06
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 5e-06
UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia intes... 53 5e-06
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 53 5e-06
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 53 7e-06
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 53 7e-06
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 7e-06
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 53 7e-06
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 52 9e-06
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 52 9e-06
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 52 9e-06
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 52 9e-06
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 1e-05
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 52 1e-05
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 52 1e-05
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 2e-05
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 52 2e-05
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 52 2e-05
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 52 2e-05
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 52 2e-05
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 52 2e-05
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 51 2e-05
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 51 2e-05
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 51 2e-05
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 51 2e-05
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 51 3e-05
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 51 3e-05
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 51 3e-05
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 51 3e-05
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 50 4e-05
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 50 4e-05
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 50 4e-05
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 50 4e-05
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 50 4e-05
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 50 4e-05
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 50 5e-05
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 50 5e-05
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 50 5e-05
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 50 5e-05
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 50 5e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 50 5e-05
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 50 5e-05
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 50 5e-05
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 50 7e-05
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 50 7e-05
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 50 7e-05
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 7e-05
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 50 7e-05
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 50 7e-05
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 50 7e-05
UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;... 49 9e-05
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 49 9e-05
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 49 9e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 49 9e-05
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 49 9e-05
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 49 9e-05
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 49 9e-05
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 49 1e-04
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 49 1e-04
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 49 1e-04
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 49 1e-04
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 49 1e-04
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 49 1e-04
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 49 1e-04
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 49 1e-04
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 48 2e-04
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 48 2e-04
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 2e-04
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 48 2e-04
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 48 2e-04
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 48 2e-04
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 48 2e-04
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 48 2e-04
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 48 2e-04
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 48 2e-04
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 48 2e-04
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 48 2e-04
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 48 2e-04
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 48 2e-04
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 48 2e-04
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 48 2e-04
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 48 2e-04
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 48 2e-04
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 48 2e-04
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 48 2e-04
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 48 2e-04
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 48 2e-04
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 48 2e-04
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 48 3e-04
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 48 3e-04
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 48 3e-04
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 48 3e-04
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 48 3e-04
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 48 3e-04
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 48 3e-04
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 48 3e-04
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 48 3e-04
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 48 3e-04
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 48 3e-04
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 48 3e-04
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 47 4e-04
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 47 4e-04
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 47 4e-04
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 47 4e-04
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 47 4e-04
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 47 4e-04
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 47 4e-04
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 47 4e-04
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 47 5e-04
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 47 5e-04
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 47 5e-04
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 47 5e-04
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 47 5e-04
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 47 5e-04
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 47 5e-04
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 47 5e-04
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 46 6e-04
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 46 6e-04
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 46 6e-04
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 6e-04
UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=... 46 6e-04
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 46 6e-04
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 46 6e-04
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 46 6e-04
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 6e-04
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 46 8e-04
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 46 8e-04
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 46 8e-04
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 46 8e-04
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 46 8e-04
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 46 8e-04
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 46 8e-04
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 46 8e-04
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 46 8e-04
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 8e-04
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 46 8e-04
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 46 8e-04
UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG3... 46 8e-04
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 46 8e-04
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 46 8e-04
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 46 0.001
UniRef50_UPI0000DB7B84 Cluster: PREDICTED: similar to Probable A... 46 0.001
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 46 0.001
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 46 0.001
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 46 0.001
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 46 0.001
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 46 0.001
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 46 0.001
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 46 0.001
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 46 0.001
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 46 0.001
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 46 0.001
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 46 0.001
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 46 0.001
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 46 0.001
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 46 0.001
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 46 0.001
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 45 0.001
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 45 0.001
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 45 0.001
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 45 0.001
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 45 0.001
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 45 0.001
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 45 0.001
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 45 0.001
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 45 0.001
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 45 0.001
UniRef50_UPI00004989D1 Cluster: DEAD/DEAH box helicase; n=2; En... 45 0.002
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 45 0.002
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 45 0.002
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 45 0.002
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 45 0.002
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.002
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 45 0.002
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 45 0.002
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 45 0.002
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 45 0.002
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 45 0.002
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 45 0.002
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 45 0.002
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 45 0.002
UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1; Y... 45 0.002
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 45 0.002
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 45 0.002
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 44 0.003
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 44 0.003
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 44 0.003
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 44 0.003
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 44 0.003
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 44 0.003
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 44 0.003
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 44 0.003
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.003
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 44 0.003
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 44 0.003
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 44 0.003
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 44 0.003
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 44 0.003
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 44 0.003
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 44 0.003
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 44 0.003
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 44 0.003
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.003
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 44 0.003
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 44 0.003
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 44 0.003
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 44 0.003
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 44 0.003
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 44 0.003
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 44 0.003
UniRef50_P26802 Cluster: Probable ATP-dependent RNA helicase Dbp... 44 0.003
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.004
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.004
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 44 0.004
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 44 0.004
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 44 0.004
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 44 0.004
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 44 0.004
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.004
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 44 0.004
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 44 0.004
UniRef50_Q0V1U7 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 44 0.004
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 44 0.004
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 43 0.006
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 43 0.006
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 43 0.006
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 43 0.006
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 43 0.006
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 43 0.006
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 43 0.006
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 43 0.006
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.006
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 43 0.006
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 43 0.006
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 43 0.006
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 43 0.006
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 43 0.008
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 43 0.008
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 43 0.008
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 43 0.008
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 43 0.008
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 43 0.008
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 43 0.008
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 43 0.008
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 43 0.008
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 43 0.008
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 43 0.008
UniRef50_Q7QIL5 Cluster: ENSANGP00000021642; n=1; Anopheles gamb... 43 0.008
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 43 0.008
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.008
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 43 0.008
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 43 0.008
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 43 0.008
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 43 0.008
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 42 0.010
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 42 0.010
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.010
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 42 0.010
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 42 0.010
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 42 0.010
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 42 0.010
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 42 0.010
UniRef50_Q1E370 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q873H9 Cluster: ATP-dependent rRNA helicase spb-4; n=14... 42 0.010
UniRef50_Q5KCY8 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 42 0.010
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 42 0.010
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 42 0.010
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 42 0.010
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.010
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 42 0.013
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 42 0.013
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 42 0.013
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 42 0.013
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 42 0.013
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 42 0.013
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 42 0.013
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 42 0.013
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.013
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 42 0.013
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 42 0.013
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.013
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 42 0.013
UniRef50_A4R7K0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 42 0.013
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 42 0.013
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 42 0.013
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 42 0.013
UniRef50_UPI0000E4A052 Cluster: PREDICTED: similar to DEAD/H box... 42 0.018
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 42 0.018
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 42 0.018
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 42 0.018
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.018
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 42 0.018
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 42 0.018
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 42 0.018
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 42 0.018
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 42 0.018
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 42 0.018
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 42 0.018
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 42 0.018
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 42 0.018
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 42 0.018
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 42 0.018
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 42 0.018
UniRef50_Q2UST1 Cluster: ATP-dependent RNA helicase mss116, mito... 42 0.018
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 42 0.018
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 42 0.018
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 41 0.023
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 41 0.023
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 41 0.023
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 41 0.023
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 41 0.023
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 41 0.023
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.023
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 41 0.023
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.023
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 41 0.023
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 41 0.023
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 41 0.023
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 41 0.023
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 41 0.023
UniRef50_Q6C2D3 Cluster: Yarrowia lipolytica chromosome F of str... 41 0.023
UniRef50_Q5KKF5 Cluster: ATP-dependent RNA helicase, putative; n... 41 0.023
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 41 0.023
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 41 0.023
UniRef50_Q0UG00 Cluster: ATP-dependent RNA helicase MSS116, mito... 41 0.023
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 41 0.023
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 41 0.023
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 41 0.031
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 41 0.031
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 41 0.031
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 41 0.031
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 41 0.031
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 41 0.031
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 41 0.031
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 41 0.031
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 41 0.031
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 41 0.031
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 41 0.031
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 41 0.031
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 41 0.031
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 41 0.031
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 41 0.031
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 41 0.031
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 41 0.031
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 40 0.041
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 40 0.041
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 40 0.041
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.041
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 40 0.041
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 40 0.041
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 40 0.041
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 40 0.041
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.041
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.041
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 40 0.041
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.041
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 40 0.041
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 40 0.041
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 40 0.054
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 40 0.054
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.054
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 40 0.054
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 40 0.054
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 40 0.054
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 40 0.054
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 40 0.054
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 40 0.054
UniRef50_Q01BD2 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 40 0.054
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 40 0.054
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 40 0.054
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.054
UniRef50_Q1JSZ1 Cluster: ATP-dependent RNA helicase, putative; n... 40 0.054
UniRef50_A7AR78 Cluster: DEAD box RNA helicase, putative; n=1; B... 40 0.054
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 40 0.054
UniRef50_Q2GWX0 Cluster: Putative uncharacterized protein; n=4; ... 40 0.054
UniRef50_A6SIR8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.054
UniRef50_A6QXM9 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.054
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 40 0.054
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 40 0.054
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 40 0.054
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 40 0.054
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.054
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 40 0.054
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 40 0.054
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 40 0.054
UniRef50_Q6BPT8 Cluster: ATP-dependent RNA helicase DBP6; n=6; S... 40 0.054
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 40 0.054
UniRef50_UPI00015B4BA3 Cluster: PREDICTED: similar to GA21960-PA... 40 0.071
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 40 0.071
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.071
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 40 0.071
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.071
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 40 0.071
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 40 0.071
UniRef50_Q4UG97 Cluster: ATP-dependent RNA helicase, putative; n... 40 0.071
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.071
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 40 0.071
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 40 0.071
UniRef50_Q5APM7 Cluster: ATP-dependent RNA helicase MSS116, mito... 40 0.071
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 40 0.071
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 40 0.071
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 39 0.094
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 39 0.094
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 39 0.094
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.094
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.094
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.094
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 39 0.094
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 39 0.094
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 39 0.094
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 39 0.094
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.094
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.094
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 39 0.094
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 39 0.094
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 39 0.094
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 39 0.094
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 39 0.094
UniRef50_Q6CDN5 Cluster: ATP-dependent RNA helicase DBP6; n=1; Y... 39 0.094
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 39 0.094
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 39 0.094
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 39 0.12
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 39 0.12
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 39 0.12
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 39 0.12
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 39 0.12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 39 0.12
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.12
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 39 0.12
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 39 0.12
UniRef50_Q7QV50 Cluster: GLP_435_34658_36088; n=1; Giardia lambl... 39 0.12
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 39 0.12
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 39 0.12
UniRef50_Q4QAV6 Cluster: ATP-dependent RNA helicase, putative; n... 39 0.12
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 39 0.12
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 39 0.12
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 39 0.12
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 39 0.12
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 39 0.12
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 39 0.12
UniRef50_Q7S0W1 Cluster: Putative uncharacterized protein NCU097... 39 0.12
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 39 0.12
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 39 0.12
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 39 0.12
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 39 0.12
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 39 0.12
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 39 0.12
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 39 0.12
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 131 bits (316), Expect = 2e-29
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = +3
Query: 297 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
WK LK+PPKD RIKTSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 72 WKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 131
Query: 477 SGKDVLARAK 506
SG+D+LARAK
Sbjct: 132 SGRDILARAK 141
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQIC 634
GTGK+GAY IP+LE++D KKD IQA+++VPTRELALQ SQIC
Sbjct: 143 GTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQIC 184
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 129 bits (312), Expect = 5e-29
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = +3
Query: 297 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
WK LK+PPKD R++TSDVT T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIAL
Sbjct: 65 WKRNLKLPPKDNRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIAL 124
Query: 477 SGKDVLARAK 506
SG+D+LARAK
Sbjct: 125 SGRDILARAK 134
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/48 (72%), Positives = 43/48 (89%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGK+GAY IP+LE++D KKD IQAL++VPTRELALQ SQI I++AKH
Sbjct: 136 GTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKH 183
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 113 bits (273), Expect = 3e-24
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +3
Query: 297 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
WK+ LK+PPKD RIKT DVT T+GNEFE++CLKRELL+GIFE GWE PS IQE SIPIAL
Sbjct: 59 WKT-LKLPPKDLRIKTLDVTSTKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIAL 116
Query: 477 SGKDVLARAK 506
SG+D+LARAK
Sbjct: 117 SGRDILARAK 126
Score = 79.8 bits (188), Expect = 5e-14
Identities = 34/48 (70%), Positives = 44/48 (91%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGK+GAY IP+LE++D KKD IQA+++VPTRELALQ SQICI+++KH
Sbjct: 128 GTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 175
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 107 bits (257), Expect = 2e-22
Identities = 50/83 (60%), Positives = 62/83 (74%)
Frame = +3
Query: 288 DVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIP 467
D WK+ L IP KD R +T DV +T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP
Sbjct: 19 DRDWKTALNIPKKDTRPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIP 78
Query: 468 IALSGKDVLARAKKELVKLVLIV 536
+A++G+D+LARAK K V
Sbjct: 79 VAITGRDILARAKNGTGKTAAFV 101
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT A+ IP LE+V PK + IQALI+VPTRELALQTSQ+ L KH I
Sbjct: 93 GTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGI 143
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 98.7 bits (235), Expect = 1e-19
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +3
Query: 297 WKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
WK L PPKD R +T DVT T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL
Sbjct: 12 WKQGLAAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMAL 71
Query: 477 SGKDVLARAK 506
+G+D+LARAK
Sbjct: 72 TGRDILARAK 81
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT ++ IP L +++ IQALI+VPTRELALQTSQ+C L H
Sbjct: 83 GTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAH 130
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 65.7 bits (153), Expect = 9e-10
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +2
Query: 422 KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPT 601
KG A G Y +WK K+ GTGKT A+ IP++E +DP+ D +QAL++ PT
Sbjct: 30 KGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPT 89
Query: 602 RELALQ 619
RELALQ
Sbjct: 90 RELALQ 95
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+ + L E++ I +KG+ + +P+Q +IP + KDV+A+A
Sbjct: 14 YADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKA 56
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/48 (54%), Positives = 40/48 (83%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKTG++ IP+L+ V+P KD IQAL+++ TRELA+QT+++ L+K+
Sbjct: 68 GTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKN 115
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +3
Query: 324 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+D RI T DV + G F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARA
Sbjct: 7 RDTRITTDDVKGS-GVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARA 65
Query: 504 K 506
K
Sbjct: 66 K 66
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ-TSQICIELAKHTDI 661
GTGKT A+ +P+LE++DP+ +QALIV PTRELALQ T++I L + DI
Sbjct: 52 GTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDI 103
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +3
Query: 420 EKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
E G + +PIQE +IP+ LSGKD++ +AK K + V
Sbjct: 22 ENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFV 60
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 58.4 bits (135), Expect = 1e-07
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P+L++VD K+++Q +++ PTRELA+Q + ++ KH +R
Sbjct: 49 GTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVR 100
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQ 47
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKTGA+ +P+LE++DP + + QAL++VPTRELALQ L + T +R
Sbjct: 84 GSGKTGAFLLPLLERLDPAEASTQALVLVPTRELALQVEHEARTLFEGTGLR 135
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +3
Query: 357 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
D FEE L+ L+ + +KG EKP+PIQE +IP+ L GKDV+ARAK
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAK 69
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
K T ++ GTGKT A+ IP++E++DP +QAL++ PTRELA+QT++ L K+
Sbjct: 43 KDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKY 99
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQ 50
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 56.0 bits (129), Expect = 8e-07
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P+LE++DP++ +QA+++ PTRELA+Q + ++ +R
Sbjct: 50 GTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLR 101
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A IP++++VDP D IQ L++VPTREL +Q + ++A TD+
Sbjct: 48 GSGKTAACAIPLIQKVDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDV 98
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAE 46
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
+S GTGKT A+ IP+LE++ + AL++ PTRELA+Q +Q LAKH D+
Sbjct: 63 RSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDL 117
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSK 65
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIVF 539
F++FCLK EL I E G+E PS +Q ++P A+ G D+LA+AK + K + VF
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVF 92
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P+LE++ PKK T + +I+ PTRELA+Q + ++LA HTDI+
Sbjct: 340 GSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIK 394
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGA 337
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT A+ +P+L+ +D K+ +Q LI+VPTRELA+Q +C+ K
Sbjct: 53 GSGKTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIK 99
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
GTGKT A+ +P+LE+V+ +K TIQALI+ PTRELA+Q + +LA+
Sbjct: 50 GTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAETKKLAE 96
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/83 (36%), Positives = 44/83 (53%)
Frame = +2
Query: 401 IVDGYF*KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQ 580
I+D G E + L K + +S GTGKT AY +P+L ++DP KD +Q
Sbjct: 15 IIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQ 74
Query: 581 ALIVVPTRELALQTSQICIELAK 649
+I PTRELA Q Q +++ +
Sbjct: 75 VVITAPTRELANQIYQEALKITQ 97
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ +P+L+++D ++QAL++ PTRELALQ + LAKH
Sbjct: 52 GTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKH 99
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++ L+ ELL I E G+ +PSPIQ +IP L G+DV+ +A+
Sbjct: 7 FKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQ 50
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/40 (57%), Positives = 32/40 (80%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ IP++E+V+ K +QAL+V PTRELA+Q S+
Sbjct: 49 GTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSE 88
Score = 40.7 bits (91), Expect = 0.031
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQ 47
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
KS GTGKT ++ +P+LE+++P K +QA+I+ PTRELA+Q
Sbjct: 44 KSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQ 84
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/40 (52%), Positives = 33/40 (82%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ IP++E+++P+ IQA+++ PTRELA+Q S+
Sbjct: 50 GTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSE 89
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQ 48
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 54.0 bits (124), Expect = 3e-06
Identities = 20/52 (38%), Positives = 38/52 (73%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P++E++ P + +QAL++ PTRELA+Q ++ ++ +H ++
Sbjct: 53 GTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVK 104
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQ 51
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
GTGKT A+ +P+L+ +D D IQA+I+ PTREL Q + I A+HT
Sbjct: 51 GTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHT 99
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P+LE++ PKK T + +++ PTRELA+Q + +LA HTDI+
Sbjct: 323 GSGKTAAFVVPILERLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIK 377
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGA 320
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIR 664
+S G+GKT AY +PVL V+ K +++A+I++PTRELALQT ++ L K + I+
Sbjct: 39 RSKTGSGKTAAYLLPVLNSVEKLKGKSVKAIIILPTRELALQTHRVASRLGKISGIK 95
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 435 KPSPIQEASIPIALSGKDVLARAK 506
+P+ IQE +IP+ L+GKDV+ R+K
Sbjct: 18 EPTEIQEKAIPVVLTGKDVIIRSK 41
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IPV+E+V + +QALI+ PTRELA+Q S +L+KH IR
Sbjct: 53 GTGKTAAFGIPVVEKVSTGRH-VQALILTPTRELAIQVSGEIQKLSKHKKIR 103
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQ 51
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/66 (36%), Positives = 43/66 (65%)
Frame = +3
Query: 333 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKE 512
R +T+D+ F E L++E+L G+ + G+++PSPIQ +IP+ +SG D++A+AK
Sbjct: 31 RKRTNDIEIEDNITFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSG 90
Query: 513 LVKLVL 530
K ++
Sbjct: 91 TGKTIV 96
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK--DTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P+++ V KK T ALI+VPTRELA Q + A+HTD+R
Sbjct: 54 GTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQYAEHTDLR 107
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + ++++L+ + P+P+QE SIP L GKD+LA A+
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQ 52
>UniRef50_Q7QWI2 Cluster: GLP_538_22840_21176; n=2; Giardia
intestinalis|Rep: GLP_538_22840_21176 - Giardia lamblia
ATCC 50803
Length = 554
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIP-VLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 646
C C + G+GK+GAY IP +L P D + L++VPTRELA Q +++C +LA
Sbjct: 136 CLCLAPTGSGKSGAYIIPSILSLGQPGSDGFRVLVLVPTRELADQVARVCNQLA 189
Score = 39.5 bits (88), Expect = 0.071
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 396 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+EL I + GWE PSP+Q+A+IP +S +D L A
Sbjct: 105 KELQKNISKLGWEVPSPVQQAAIPALMSRRDCLCLA 140
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT + IPV+E + P K T Q L+V PTRELA Q I AKHT ++
Sbjct: 50 GTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLK 103
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 52.8 bits (121), Expect = 7e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKTGA+ IP++E++ K ++AL++ PTRELA+Q + L K+
Sbjct: 47 GTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKY 94
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 390 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
L EL + + G+++P+PIQ +IP+AL G D+L +A
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQA 44
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ +P+L+ + P+ T QALI+ PTRELA+Q ++ L+K+
Sbjct: 53 GTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKY 100
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K +S GTGKT AY IP+L ++DP+ +QA+I+ P+ ELA+Q Q + K +I
Sbjct: 48 KDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIEKWTKDNNI 107
Score = 34.3 bits (75), Expect = 2.7
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 426 GWEKPSPIQEASIPIALSGKDVLARA 503
G+ P+PIQE +IP+ L GKD++A +
Sbjct: 29 GFTAPTPIQEEAIPLILEGKDLIAES 54
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 643
GTGKT A+ IP++E++D K + +QAL++ PTRELAL Q+C E+
Sbjct: 50 GTGKTAAFGIPLIERLDEKANDVQALVLTPTRELAL---QVCNEI 91
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAK 506
+F++ L +L I KG+E P+PIQE IP+ LSGK +V+ +A+
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQ 48
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +PVL +D D IQALI+ PTREL Q + + K+ D R
Sbjct: 50 GTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDR 101
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
F++F LK ELL I E G+E PS +Q+ +IP A++G D+L +AK + K + V
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFV 110
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIVFQFW 548
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK K + V
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 549 N 551
N
Sbjct: 98 N 98
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K C++ GTGKT + + VL Q+ L++ TRELA Q L K T+
Sbjct: 76 KDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNF 135
Query: 662 R 664
+
Sbjct: 136 K 136
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 52.4 bits (120), Expect = 9e-06
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 336 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+K+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+
Sbjct: 36 LKSKHKQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQ 90
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IP+L ++ KD I+ALI+ PTRELA+Q S+ ++L + I+
Sbjct: 92 GTGKTAAFAIPILNTLNRNKD-IEALIITPTRELAMQISEEILKLGRFGRIK 142
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
+S GTGKT A+ +P+LE++ + ++ALI+ PTRELALQ + LAKH ++
Sbjct: 72 RSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKMLAKHKGLK 127
Score = 36.3 bits (80), Expect = 0.66
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSK 74
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +3
Query: 306 KLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK 485
K+K+ +R++K + + FEE L R LL + + G+ +P+PIQ +IP+AL+GK
Sbjct: 171 KIKVLQSNRKLKK--IVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGK 228
Query: 486 DVLARA 503
D+LA A
Sbjct: 229 DILASA 234
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV---DPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ +PVLE++ D + I+ LI++PTRELALQ + LA+ ++I
Sbjct: 237 GSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNI 290
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IP++E + P +Q L+VVPTRELA+Q ++ + K IR
Sbjct: 49 GTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIR 100
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/45 (37%), Positives = 31/45 (68%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQAR 47
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT AY +PVL+++ K Q LIV PTRELALQ + +L K+ +R
Sbjct: 49 GTGKTAAYLLPVLQRIQRGKKA-QVLIVTPTRELALQVADEVAKLGKYLKVR 99
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
EF++ L LL + + G+E P+PIQ+ +IP+ L G +++ +A
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQA 46
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+L+++ + T I+AL+V PTRELALQT ++ EL + T +R
Sbjct: 71 GSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Score = 37.1 bits (82), Expect = 0.38
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+++ L + I +KG+ +P+PIQ +IP + GKDV+A ++
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
K T ++ GTGKT A+ IP+LE +D + + +QA+I+ PTRELA+Q ++
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAE 90
Score = 34.3 bits (75), Expect = 2.7
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQ 49
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +3
Query: 282 IDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEAS 461
+D+V +++ DR + + FEE L L+ + +KG EKP+ IQ+++
Sbjct: 17 VDEVEKAEEVEEQRNDREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSA 76
Query: 462 IPIALSGKDVLARAK 506
IP L GKDV+ARAK
Sbjct: 77 IPYILEGKDVVARAK 91
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +2
Query: 392 EARIVDGYF*KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQ------ 553
++R++ KG+ + + Y + K ++ G+GKT AY +P+L++
Sbjct: 54 DSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADS 113
Query: 554 VDPKKDTIQALIVVPTRELALQ 619
V KK A I+VP+REL Q
Sbjct: 114 VSKKKLAPSAFILVPSRELCQQ 135
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +2
Query: 476 KWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
K K K+ GTGKT AY +P++E++D K+ +QA+I+ PT EL +Q + + +L +
Sbjct: 38 KGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVLNDLKR 95
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
++F + L E+L + G E+P+ IQE +IP L GK+V+ +A+
Sbjct: 2 DKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAE 47
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +3
Query: 357 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
D FEE L+ L+ + + G EKP+ IQE +IP+ L GKDV+ARAK
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAK 69
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKAR 56
Score = 43.6 bits (98), Expect = 0.004
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +2
Query: 392 EARIVDGYF*KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKD 571
+ RI+ G G E K K K+ G+GKTGAY IP+++++
Sbjct: 19 DPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQRILHIAS 78
Query: 572 TIQALIVVPTRELALQTSQICIEL 643
T +ALI+ PTREL Q + EL
Sbjct: 79 T-RALIIGPTRELCSQIEAVVREL 101
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKTGAY I +L+++ + IQ LIV PTRELA+Q ++ + AK+T +R
Sbjct: 49 GTGKTGAYSISMLQEIK-EGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVR 99
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQA 46
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
G+GKT A+ +P+L+ +DP+ Q L++ PTRELA+Q ++ + +KH
Sbjct: 53 GSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKH 100
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + LK +L + + G+EKPSPIQ IP L+G+DVL A+
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQ 51
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
G+GKT A+ +P+L Q+DP + Q L++ PTRELA+Q + C K+
Sbjct: 52 GSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKY 99
Score = 39.1 bits (87), Expect = 0.094
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L +L + + G+E PSPIQ++ IP L+G DVL A+
Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQ 50
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2
Query: 476 KWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
K + +S G+GKT ++ IP+ E ++ + IQALIVVPTRELALQ ++ +
Sbjct: 39 KGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDEISDIGRLK 98
Query: 656 DIR 664
+R
Sbjct: 99 KVR 101
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLE--QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P ++ +P++ ++ALI+ PTRELALQ ++ +++A+ T IR
Sbjct: 49 GTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIR 102
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F E L +L + + + +P+PIQ +I AL+GKD++A A+
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQ 47
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
GTGKT A+ +P+L VD + +QAL++ PTRELA+Q++Q + A T
Sbjct: 92 GTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAART 140
Score = 35.9 bits (79), Expect = 0.88
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 345 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+D DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+
Sbjct: 37 ADEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQ 90
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/40 (50%), Positives = 32/40 (80%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT ++ +P+L ++D K+ T QAL++ PTRELA+Q ++
Sbjct: 54 GTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQVAE 93
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L LL + E G+E PSPIQ A+IP+ L+ +DVL +A+
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQ 52
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+K
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSK 60
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
K +S GTGKT ++ IP+L+ + + I+++I+VPTRELALQ S + +L+K+
Sbjct: 53 KDILARSKNGTGKTLSFLIPILQNIYSESYGIESIILVPTRELALQISSLLRKLSKY 109
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 646
C + G+GKT AY + +L +D ++ +QALIVVPTREL +Q +++ LA
Sbjct: 107 CVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLA 159
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT AY +P++ +++ + +++LI+ PTRELALQT ++ EL K T+++
Sbjct: 60 GSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLK 112
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMAR 58
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ IP+LE +D QALI+ PTRELA+Q ++
Sbjct: 50 GTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAE 89
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAK 506
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQ 48
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +3
Query: 261 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKP 440
KG D ID+ + K + + F L R +L G+ G+ KP
Sbjct: 195 KGGKDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYENFNSLSLSRPVLKGLASLGYVKP 254
Query: 441 SPIQEASIPIALSGKDVLARA 503
SPIQ A+IPIAL GKD++A A
Sbjct: 255 SPIQSATIPIALLGKDIIAGA 275
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/50 (36%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAK 649
G+GKT A+ IP++E++ P K + + ++++PTRELA+Q + + ++A+
Sbjct: 278 GSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIAR 327
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +3
Query: 357 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
D+ FE L LL + + GW +P+ IQE +IP+AL GKD+LARA+
Sbjct: 3 DSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARAR 52
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-------IQALIVVPTRELALQTSQICIELAKH 652
G+GKT AY IP+L+ + +K T ++ L++VPT+ELA Q + +LA +
Sbjct: 54 GSGKTAAYAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATY 108
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +3
Query: 318 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
PPK + IK S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL
Sbjct: 29 PPK-KDIKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLC 86
Query: 498 RAKKELVKLVLIV 536
+AK + K + V
Sbjct: 87 QAKSGMGKTAVFV 99
Score = 39.9 bits (89), Expect = 0.054
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 494 CKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
C++ G GKT + + L+Q++P + L++ TRELA Q S+
Sbjct: 86 CQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISK 130
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/52 (46%), Positives = 33/52 (63%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IP++E +D QAL++ PTRELALQ ++ L K +R
Sbjct: 92 GTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVR 143
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 360 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG 482
T + FE F L ++ + + G+ P+PIQ ++PI L+G
Sbjct: 41 TTVDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAG 81
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQ-VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ +P+L Q +D + T +AL++ PTRELA Q + +LA HT I
Sbjct: 48 GSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPI 99
Score = 39.1 bits (87), Expect = 0.094
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F L LL + E G+ +P+PIQ +IP A+SG+DV+A A
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASA 45
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
K T ++ GTGKT A+ IP +E VD + Q+LI+ PTRELAL Q+C EL K
Sbjct: 39 KDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELAL---QVCTELKK 91
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQ 46
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD 658
GTGKT A+ +P+L ++D K+ QAL++ PTRELA+Q ++ A+ D
Sbjct: 52 GTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVD 101
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 473 PKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 643
P + ++ GTGKTGA+ I VL ++D + T QAL++ PTRELA Q + E+
Sbjct: 128 PSNRHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEI 184
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 473 PKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
P +K ++ G+GKT + + +L +VDP + QA+ + PTRELA Q + + + K
Sbjct: 138 PPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKF 197
Query: 653 TDI 661
T I
Sbjct: 198 TGI 200
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ IP+L ++D QAL++VPTRELALQ ++
Sbjct: 60 GTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAE 99
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQ 58
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F E L LL + + GW +P+ IQE +IP+AL GKD+LARA+
Sbjct: 7 QFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARAR 51
Score = 39.5 bits (88), Expect = 0.071
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-----IQALIVVPTRELALQTSQICIELAKH 652
G+GKT AY +PV++++ K + ++ALI+VPT+EL Q + +L +
Sbjct: 53 GSGKTAAYAVPVIQRILASKQSVREQDVKALILVPTKELGQQVQTMIRQLTAY 105
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K +S GTGKT AY +PVLE++ P++ QA+I+ P+REL +Q Q+ + +++
Sbjct: 42 KDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAGSEL 101
Query: 662 R 664
R
Sbjct: 102 R 102
Score = 32.7 bits (71), Expect = 8.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 GWEKPSPIQEASIPIALSGKDVLARA 503
G++KP+P+QE + + + GKDV+A +
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAES 48
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT AY +P+ E++D K QALI+ PT EL +Q + LAK+ ++
Sbjct: 49 GTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKNAEL 99
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKTG + IP+ E++ + K +AL++ PTRELA+QT + +L K TD++
Sbjct: 85 GSGKTGCFLIPLFEKLKQREIKSGARALVLTPTRELAIQTFKFIKQLGKFTDLK 138
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 363 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+G F+ L +L I + G++ P+PIQ +IP+ L G+DV+A AK
Sbjct: 36 KGGGFQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAK 83
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +3
Query: 324 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
KD + ++ + +F +F + + L G+ + G+ P+ IQ+ IP+ALSG+DVL A
Sbjct: 35 KDLEDRCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAA 94
Query: 504 K----KELVKLVLIVFQFW 548
K K L L+ I+ W
Sbjct: 95 KTGSGKTLAFLIPIIETLW 113
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ IP++E + +K D + AL++ PTRELA QT ++ +++ D+
Sbjct: 97 GSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDL 151
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
+S G+GKT AY IP++ +K I+ALI++PTRELA+Q +++ L K + IR
Sbjct: 45 RSKTGSGKTAAYLIPIINNTAKEKG-IRALILLPTRELAVQVAKVSEALGKRSGIR 99
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSK 47
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IPVLE ++ ++ QALI+ PTREL LQ S+ + K+ ++
Sbjct: 51 GTGKTAAFAIPVLENLEAER-VPQALIICPTRELCLQVSEEIKRIGKYMKVK 101
Score = 39.5 bits (88), Expect = 0.071
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 363 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQ 49
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ +P+LE++ PKK T + LI+ PTRELA+Q + ++A TDI
Sbjct: 306 GSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDI 359
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 339 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
K + T + F+ L R +L G+ G+E P+ IQ+ +IP+AL GKD++ A
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAA 303
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD 658
GTGKT A+ +P+L+Q+D K Q+LI+ PTREL LQ + + +K+ D
Sbjct: 50 GTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYID 99
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAK 506
FEE + E+ I E G+E P P+QE IP L DV+A A+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQ 48
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTS 625
GTGKT A+ +P+L ++DP + Q LI+ PTRELALQ +
Sbjct: 70 GTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVA 108
Score = 36.7 bits (81), Expect = 0.50
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 402 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+L I G+E+PSPIQ +IP+ L+G D++ +A+
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQ 68
>UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Psychroflexus torquis ATCC 700755
Length = 443
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
GTGKT A+ +P+L +DP+ +Q LI+VP+RELA+Q Q+
Sbjct: 44 GTGKTLAFSLPLLTILDPESPDVQVLILVPSRELAIQIEQV 84
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ P+L+ +D T Q LI+ PTREL LQ + AKH
Sbjct: 49 GTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKH 96
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 506
F++ L LL I + G+E PS IQE +IP L+ +D++A A+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQ 47
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKTGA+ IP+LE++ P+K T + I++PTRELA+Q + +LA TDI
Sbjct: 352 GSGKTGAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 405
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +3
Query: 300 KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 479
K K P+++ D+ + F+ F L R +L G+ G+ P+PIQ +IP+AL
Sbjct: 284 KQKSFFAPEEKPSANGDLKSAKS--FQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL 341
Query: 480 GKDVLARA 503
GKDV+ A
Sbjct: 342 GKDVVGGA 349
>UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,
chloroplast precursor; n=6; Magnoliophyta|Rep: DEAD-box
ATP-dependent RNA helicase 58, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 472
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
C + G+GKT Y + + ++P++ ++QA+IVVPTREL +Q +++ LA ++I
Sbjct: 116 CILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEI 173
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 49.6 bits (113), Expect = 7e-05
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K +S GTGKT +Y +P+L ++ + +IQ +I+VP RELALQ S+ +++ T +
Sbjct: 146 KNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTGV 205
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 330 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+R+ + DV +T G +E L LL I + G++ PSP+Q ASIP L GK++L R+K
Sbjct: 95 KRLLSEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSK 153
>UniRef50_UPI00015B6103 Cluster: PREDICTED: similar to CG8611-PB;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG8611-PB - Nasonia vitripennis
Length = 964
Score = 49.2 bits (112), Expect = 9e-05
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLE---QVDPK--KDT-IQALIVVPTRELALQTSQICIELAK 649
+S G+GKT AY +P++E +V PK +D+ I+AL+VVPTRELALQT + ++L K
Sbjct: 371 RSQTGSGKTLAYALPIIETLQRVRPKLARDSGIKALVVVPTRELALQTYECFLKLVK 427
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +3
Query: 276 KSIDDVGWKSKLKIPPKDRRIKTSDVTDT---RGNEFEEFCLKRELLMGIFEKGWEKPSP 446
K+ + VG+ +I D + +D+ + F+ L +L GI ++G++ P+P
Sbjct: 2 KNTNIVGFADPKEISDNDEENEINDIKKKVYKKSGGFQSMALSFPILKGILKRGYKIPTP 61
Query: 447 IQEASIPIALSGKDVLARAK 506
IQ +IP+AL G+D++A A+
Sbjct: 62 IQRKTIPLALEGRDIVAMAR 81
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + IP+ E++ ++ + +ALI+ PTRELALQT + EL + T ++
Sbjct: 83 GSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLK 136
>UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG8611-PA, isoform A - Tribolium castaneum
Length = 624
Score = 49.2 bits (112), Expect = 9e-05
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 6/56 (10%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLE---QVDPK---KDTIQALIVVPTRELALQTSQI 631
K +S G+GKT AY +P++ V+P+ +D +QA+IVVPTRELALQT +I
Sbjct: 167 KNVLIRSQTGSGKTLAYALPIMNALLSVEPRLQRQDGVQAIIVVPTRELALQTHEI 222
>UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep:
SrmB - Mycoplasma gallisepticum
Length = 457
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
GTGKT A+ +P+L+ +D ++ IQA+I+VPTRELA Q + K
Sbjct: 48 GTGKTLAFLLPILQNLDFAQNLIQAVIIVPTRELANQIKSVLANFVK 94
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT A+ +P+L ++ + ++ L++ PTRELALQ + + +K+TD+
Sbjct: 180 GTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDL 230
Score = 35.9 bits (79), Expect = 0.88
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L L + E G+ +P+PIQ ++P L+G+DV A+
Sbjct: 135 FSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQ 178
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 321 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 500
P + +K S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL +
Sbjct: 30 PAKKDVKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQ 88
Query: 501 AKKELVKLVLIV 536
AK + K + V
Sbjct: 89 AKSGMGKTAVFV 100
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 49.2 bits (112), Expect = 9e-05
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 321 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 500
P + +K S V+ + F +F LK ELL I + G+E PS +Q IP A+ G DVL +
Sbjct: 30 PAKKDVKGSYVS-IHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQ 88
Query: 501 AKKELVKLVLIV 536
AK + K + V
Sbjct: 89 AKSGMGKTAVFV 100
Score = 39.1 bits (87), Expect = 0.094
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 494 CKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
C++ G GKT + + L+Q++P + L++ TRELA Q S+
Sbjct: 87 CQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISK 131
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQV--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTD 658
C C + GTGKT A+ +PVLE++ P++ + + L++VPTREL +Q + +LA+ T+
Sbjct: 222 CACAA-TGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTE 280
Query: 659 I 661
+
Sbjct: 281 V 281
Score = 40.7 bits (91), Expect = 0.031
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACA 225
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKD--TIQALIVVPTRELALQTSQICIELAK 649
GTGKT A+ IP+LEQ+D +D QA+++VPTRELA Q + LA+
Sbjct: 91 GTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAAEAERLAR 139
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQAR 89
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
GTGKT A+ IP++E+++PK Q+LI+ PTREL LQ
Sbjct: 50 GTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQ 86
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQ 46
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD---PKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ P+L+++ P I++LI+ PTRELALQ + KH +R
Sbjct: 48 GTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLR 102
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAE 458
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/56 (39%), Positives = 38/56 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
+S GTGKT A+ + +L VDP + QA+ + PT+ELALQT ++ ++ + ++I+
Sbjct: 114 QSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIK 169
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/45 (46%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL-SGKDVLARAK 506
FEE LK ELL G++ G+ KPS IQEA++PI + S +++A+++
Sbjct: 72 FEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQ 116
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDT--IQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT AY +P L+ + P+K + + LI+ PTRELA+Q S ELAKHT +
Sbjct: 51 GTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKHTHL 105
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F E L LL + +KG+ +P+ IQ A+IP AL G+DVL A
Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSA 48
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
+S GTGKT A+ + +L +V+P+ + QA+ + P+RELA QT ++ E+ K T I
Sbjct: 137 QSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKI 191
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
F+E L ELL GI+ ++KPS IQE ++P+ L
Sbjct: 94 FDELGLAPELLKGIYAMKFQKPSKIQERALPLLL 127
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ IP +E ++ + +QALI+ PTREL +Q S+ +L K+
Sbjct: 56 GTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKY 103
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +3
Query: 354 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
T + +F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+
Sbjct: 4 TSMKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQ 54
>UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1;
Mycoplasma penetrans|Rep: ATP-dependent RNA helicase -
Mycoplasma penetrans
Length = 457
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +2
Query: 476 KWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
K K S GTGKT Y +P+LE ++ +QA+IVVPT+EL Q ++I KH
Sbjct: 35 KDKNVVLVSQTGTGKTLCYLLPILENINLDSKELQAVIVVPTKELIRQITKILSFFKKHN 94
Query: 656 D 658
+
Sbjct: 95 N 95
>UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=20; Bacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 436
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT AY +P L +++P ++ +Q +I PTRELA Q + ++L K
Sbjct: 51 GSGKTHAYLLPTLNRINPGREEVQLVITAPTRELAQQIYEEIVKLTK 97
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
GTGKT AY IP LE +D + IQ +I PTREL +Q Q+
Sbjct: 44 GTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQV 84
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ +P+L+ +D +QALI+ PTRELA Q +++KH
Sbjct: 61 GTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKH 108
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIAL 476
FE L + LL G+ + G+E P+ IQ+ SIPI L
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILL 48
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +PVL+Q++P Q L++VPTREL Q ++
Sbjct: 49 GTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAK 88
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQ 49
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT ++ IP+L +V K + +QAL++ PTRELA+Q ++ L++ I+
Sbjct: 51 GTGKTASFGIPILNRVI-KGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQ 101
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQAR 46
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT A+ +P+ E++ P ++ +AL++ PTRELALQ + +A H +
Sbjct: 48 GTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKV 101
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +3
Query: 336 IKTSDVTDTRGN--EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAK 506
+ T V D N FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+
Sbjct: 5 VNTGSVLDETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQ 64
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/38 (60%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQ 619
GTGKT A+ IP+LE++D K + ++A+IV PTRELALQ
Sbjct: 66 GTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQ 103
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
KS G+GKT A+ IP+ + VD ++ QAL++VPTRELA+Q +
Sbjct: 47 KSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKE 90
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ F ++ L ELL I +E P+ +Q+ IP L KD++ +++
Sbjct: 4 SNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQ 49
>UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL'
isoform 4; n=11; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 4 - Nicotiana
tabacum (Common tobacco)
Length = 425
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 646
C + G+GKT AY + +L +D ++ +QALIVVPTREL +Q I +A
Sbjct: 107 CVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQAEPPTIVVA 159
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT +C +L+Q++ + QAL++ PTRELA Q ++ L H +++
Sbjct: 59 GTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVMRALGDHLNVK 110
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A+
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQ 101
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKTG + I L+++DP + Q +I+ P RELA Q + + ++ +I
Sbjct: 103 GTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYLNI 153
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 321 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 500
P +KTSD ++ F++F L L I + G+E + +QEA++PI L GKDVLA+
Sbjct: 367 PTGEHVKTSDSYLSK-TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAK 425
Query: 501 AKKELVKLV 527
AK K V
Sbjct: 426 AKTGTGKTV 434
Score = 35.9 bits (79), Expect = 0.88
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICI 637
K K+ GTGKT A+ +P +E V D ++ I L+V PTRELA Q +
Sbjct: 420 KDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEAN 479
Query: 638 ELAKH 652
L K+
Sbjct: 480 TLLKY 484
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 333 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
R +T DV + G EF L + +L G+ G+++PSPIQ +IP+ G D++ +AK
Sbjct: 14 RTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAK 71
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 643
GTGKT + L+ + + T Q L++ PTRE+A+Q + + +
Sbjct: 73 GTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAI 117
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/61 (36%), Positives = 39/61 (63%)
Frame = +3
Query: 324 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
K+ + K ++ G F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A
Sbjct: 24 KENKKKAGKKSNKSGG-FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMA 82
Query: 504 K 506
+
Sbjct: 83 R 83
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + IP+ E++ + K +ALI+ PTRELALQT + E+ + T ++
Sbjct: 85 GSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLK 138
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 470 CPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICI 637
C K +S GTGKT Y I L+++D K+ QA+I+ PTRELA Q ++ +
Sbjct: 55 CIKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVVL 110
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ FE L LL GIF G+EKPS IQ+ +I + G DV+A+++
Sbjct: 21 DSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQ 66
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD-PKKDT-IQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+ E++ P+ T +ALI+ PTRELALQT + EL K T ++
Sbjct: 84 GSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTKLK 137
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 318 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
P ++ + + F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 20 PDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVA 79
Query: 498 RAK 506
A+
Sbjct: 80 MAR 82
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 333 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK
Sbjct: 51 RTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAK 108
>UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7;
Bacteroidales|Rep: ATP-independent RNA helicase -
Bacteroides thetaiotaomicron
Length = 444
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
G+GKT AY +P+L + P D++Q LI+VP+RELALQ +
Sbjct: 44 GSGKTLAYLLPLLLTLKPNDDSVQVLILVPSRELALQIDTV 84
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIE 640
GTGKT A+ +PVL ++D Q LI+ P++ELA+QT+Q+ E
Sbjct: 40 GTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVARE 83
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAK 50
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
GTGKT A+ IP L+ + + Q LI+ P REL Q SQ I+L K
Sbjct: 52 GTGKTAAFAIPALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGK 98
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K +S G+GKT AY +P+L +V+ K Q LIV P++ELA+Q ++ E TDI
Sbjct: 35 KDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQELAMQIVEVIREWTAGTDI 94
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK-KDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKTGA+ IP+LE++ + +DT ALI+ PTRELA QT+ + ELA T+ R
Sbjct: 48 GSGKTGAFGIPLLERMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFR 102
Score = 39.1 bits (87), Expect = 0.094
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 390 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
L R+L + GW+ P+ +QE IPI L+G+D L A
Sbjct: 8 LSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSA 45
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKK-DTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ +P+LE++ P+K T + I++PTRELA+Q + +LA +TDI
Sbjct: 837 GSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDI 890
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +3
Query: 300 KSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 479
K K P+++ + + T++ F+EF L R +L G+ + P+PIQ+ +IP+AL
Sbjct: 768 KRKAFFAPEEKTDEDA-ATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALL 826
Query: 480 GKDVLARA 503
GKD++ A
Sbjct: 827 GKDIVGSA 834
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/47 (48%), Positives = 36/47 (76%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
GTGKTGA+ IP++E+V K+ +Q+LI+ PTRELA+Q ++ E ++
Sbjct: 49 GTGKTGAFGIPLIEKVVGKQG-VQSLILAPTRELAMQVAEQLREFSR 94
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+E + + + G+++P+PIQ+ SIP AL G D+L +A+
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQ 47
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+LE++ + ++ALI+ PTR+LA QT + EL K TD+R
Sbjct: 75 GSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLR 128
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FE L + I +KG++ P+PIQ ++P+ LSG DV+A A+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMAR 73
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
F +F LK ELL I + G+E PS +Q IP A+ G DV+ +AK + K + V
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFV 101
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +2
Query: 494 CKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
C++ G GKT + + L+Q++P + AL++ TRELA QIC E +
Sbjct: 88 CQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY---QICNEFVR 136
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++E++ + +A+I+ P+RELALQT ++ EL K TD++
Sbjct: 133 GSGKTAAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGKGTDLK 186
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ L LL I KG+ P+PIQ +IP+ L +DV+ A+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMAR 131
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +3
Query: 339 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+TSD+ F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK
Sbjct: 14 RTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAK 69
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 643
GTGKT + I LE +D K ++Q +I+ PTRE+A+Q ++ L
Sbjct: 71 GTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASL 115
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQ 56
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 8/60 (13%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT--------IQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT ++ +P+++++ P+ +T ++ALI+ PTRELA Q + AKHT +R
Sbjct: 58 GTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLR 117
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = +2
Query: 425 GMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTR 604
G E + R Y + +S G+GKTGA+ +P+ + V+P K+ Q LI+ PTR
Sbjct: 60 GWTELMDVQRKAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTR 119
Query: 605 ELALQ 619
ELA Q
Sbjct: 120 ELARQ 124
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELALQTSQ 628
GTGKT AY +P+L ++ + D++ L++VPTRELA+Q Q
Sbjct: 48 GTGKTAAYMLPILHKIIESNTDSLDTLVLVPTRELAIQIDQ 88
Score = 36.3 bits (80), Expect = 0.66
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F +F LL + G+ KP+PIQ +IP+ +S D++A A+
Sbjct: 3 FNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQ 46
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/47 (51%), Positives = 29/47 (61%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKTGA+ IP++E ALIV PTRELALQ Q L+K
Sbjct: 102 GSGKTGAFLIPIIEHALKNPGQFTALIVTPTRELALQIDQEFKSLSK 148
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +3
Query: 339 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELV 518
+TSDV + F L+R+++ G+ + + P+ IQ A+IPIAL+G D+L ++K
Sbjct: 15 RTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTG 74
Query: 519 KLVLIV 536
K ++ V
Sbjct: 75 KTLIYV 80
Score = 37.1 bits (82), Expect = 0.38
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
+S GTGKT Y + L+ + L+++PTRELALQ I
Sbjct: 68 QSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDI 112
>UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 643
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+L++ P + +ALIV PTRELA Q ++ +L K+T +R
Sbjct: 237 GSGKTAAFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKYTKLR 290
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 327 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
++++K + + +++ L + LL + E +E P+ IQ +IP AL GKD+LA
Sbjct: 176 NKKLKEQKLNKKKKKTWQDLGLIKPLLKAVEEMQYEFPTNIQSLAIPAALQGKDLLA 232
>UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 633
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT----IQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+CIP++E + K + I A+I+ PTR+LA QT + +L K TDI
Sbjct: 96 GSGKTLAFCIPIVESLKKAKFSKMSGIGAIIISPTRDLAAQTFDVLKKLIKDTDI 150
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 333 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
R +T DV +FE L R +L G+ G+E+PSP+Q +IP+ G D++ +AK
Sbjct: 50 RTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAK 107
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
+S GTGKTGAY +P+L +K +LI+VPT+ELALQ +++ L+ H
Sbjct: 90 RSGTGTGKTGAYLLPILHNTLLRKGK-TSLILVPTKELALQITKVAKALSAH 140
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F E L+ LL GI ++ W P+ +Q +IP+AL G+D+LAR+
Sbjct: 49 FAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARS 91
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
+S GTGKT A+ + +L +VDP T QA+ + P+RELA Q ++ ++ + T +
Sbjct: 193 QSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQV 247
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 479
F+E L +L+ GI G++KPS IQE ++P+ LS
Sbjct: 150 FKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLS 184
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 279 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 458
S +D G K+ +RR K N F+ L + LL IF+KG++ P+PIQ
Sbjct: 40 SDEDDGNYIASKLLESNRRTKGKKGNGKASN-FQSMGLNQTLLRAIFKKGFKAPTPIQRK 98
Query: 459 SIPIALSGKDVLARAK 506
+IP+ L G+DV+ A+
Sbjct: 99 TIPLLLEGRDVVGMAR 114
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++E + +ALI+ P RELALQT ++ + +K TD+R
Sbjct: 116 GSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLR 169
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT AY +P+L + + + QALI+ PT+ELA+Q ++ +L T I
Sbjct: 49 GTGKTLAYLLPMLTKTEELPEQTQALILAPTQELAMQIVEVAKQLTATTSI 99
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT IP+ +V+ + IQALI+VPTRELALQ + ++ K+ ++
Sbjct: 62 GSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVK 113
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTS 625
GTGKT A+ +P+LE+++ + T Q L++ PTRELA+Q +
Sbjct: 118 GTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVA 156
Score = 38.3 bits (85), Expect = 0.16
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQ 116
>UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Saccharophagus degradans (strain 2-40 / ATCC
43961 / DSM 17024)
Length = 436
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/55 (45%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P+L + DP+ +T +ALI++PTRELALQT + + A +T I+
Sbjct: 48 GSGKTAAFLLPMLHKFLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQIK 102
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
EF E L + L + + + KP+ +Q +IP L+GKD++ AK
Sbjct: 2 EFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAK 46
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/40 (47%), Positives = 31/40 (77%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +P++++++P QALI+ PTRELA+Q ++
Sbjct: 50 GTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNE 89
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/29 (48%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
Frame = +3
Query: 423 KGWEKPSPIQEASIPIALS-GKDVLARAK 506
KG+++PSPIQE +IP+ LS D++ +A+
Sbjct: 20 KGFKEPSPIQEQAIPVLLSQDHDIIGQAQ 48
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +P+L +D K + QAL++ PTRELA Q ++
Sbjct: 56 GTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAE 95
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 357 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQ 54
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/54 (38%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKTGA+ IP+++++ T+ +A+I+ PTRELA+QT ++ + ++ T +R
Sbjct: 277 GSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLR 330
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 KGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNE----FEEFCLKRELLMGIFEKG 428
K + +++ K + P D + + T ++ + F+ L + LL I +KG
Sbjct: 190 KSKKSNKKEEIESSEKFESFPMDENNEQEEETTSKKKKKTGGFQSMDLTKNLLKAILKKG 249
Query: 429 WEKPSPIQEASIPIALSGKDVLARAK 506
+ P+PIQ SIP+ L G D++ A+
Sbjct: 250 FNVPTPIQRKSIPMILDGHDIVGMAR 275
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQV--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTD 658
C C + GTGKT A+ +PVLE++ P++ + + L++VPTREL +Q + +LA+ +
Sbjct: 259 CACAA-TGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCN 317
Query: 659 I 661
I
Sbjct: 318 I 318
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACA 262
>UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH
helicase DDX31; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to DEAD/DEXH helicase DDX31 -
Strongylocentrotus purpuratus
Length = 690
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQ------ALIVVPTRELALQTSQICIELAK 649
KS GTGKT AY +PV++Q+ + +Q ALI+VPTRELA Q+ + ++L K
Sbjct: 177 KSQTGTGKTLAYAVPVVQQLQGLQPKVQRLHGPYALILVPTRELACQSFETLVKLVK 233
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAK 92
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT A+ +P+L +++ + +QALI+ PTRELA SQ+ E+ K
Sbjct: 94 GSGKTAAFSLPILNKINLDQPLLQALILCPTRELA---SQVVTEIRK 137
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
GTGKT A+ +P+L +D K +QAL++ PTRELA Q
Sbjct: 102 GTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQ 138
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/44 (38%), Positives = 32/44 (72%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQ 100
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = +3
Query: 279 SIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEA 458
S D G K I P R +T+D TDT +F + +L I E+G++ P+PIQ
Sbjct: 55 SYGDTG-KISGSIHPLTYRNQTTDHTDTM--QFRSLAIIEPILQAIEEEGYQTPTPIQAE 111
Query: 459 SIPIALSGKDVLARAK 506
+IP+ L G D+L A+
Sbjct: 112 AIPLILDGNDLLGCAQ 127
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Frame = +2
Query: 509 GTGKTGAYCIPVLE-----QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT A+ IPVL+ + + KK I++LI+ PTRELA+Q + +HT +
Sbjct: 129 GTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGL 184
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 321 PKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLAR 500
P I++ T N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA
Sbjct: 13 PVSDDIRSERKTTIMSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 501 AK 506
A+
Sbjct: 73 AQ 74
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--------DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P LE++ P ++ L++ PTRELA Q Q K+ +R
Sbjct: 76 GTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSYIKNLPLR 135
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/52 (42%), Positives = 37/52 (71%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT AY +P+ ++ +K +QALI+VPT ELA+Q + L+++++I+
Sbjct: 50 GTGKTLAYLLPLFMKLSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIK 101
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++E++ + +ALI+ P+RELALQT ++ E K TD++
Sbjct: 137 GSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGTDLK 190
Score = 39.1 bits (87), Expect = 0.094
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 354 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
T + F+ L LL I KG+ P+PIQ SIP+ L +DV+ A+
Sbjct: 85 TGKKSGGFQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMAR 135
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQA--LIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++E++ A LI+ P+RELALQT ++ EL K TD++
Sbjct: 138 GSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGKGTDLK 191
Score = 40.3 bits (90), Expect = 0.041
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +3
Query: 273 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 452
D DD + ++ + + T +G F+ L LL I KG+ P+PIQ
Sbjct: 59 DSDEDDEAFIAEKQTSANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQ 118
Query: 453 EASIPIALSGKDVLARAK 506
+IP+ + +DV+ A+
Sbjct: 119 RKTIPVIMEDQDVVGMAR 136
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
GTGKT +CI LE +D ++Q LI+ PTRE+A+Q +Q+
Sbjct: 43 GTGKTLVFCIISLEMIDIDISSVQVLILAPTREIAVQIAQV 83
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +3
Query: 396 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+++L G+ G+++PSPIQ +IP+ G D++ RAK
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAK 41
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD 658
KS GTGKT + LE V+ KD +Q LI+VPTRE+A+Q + + H +
Sbjct: 67 KSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
Score = 40.3 bits (90), Expect = 0.041
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 327 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
D + +T DV F L ++ G+ G++KPSPIQ +IP+ G D++ ++K
Sbjct: 10 DAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIVKSK 69
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
GTGKT A+ IP+L +D + IQ L++ PTRELA Q L K+T
Sbjct: 48 GTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQLNILGKYT 96
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQ 46
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +2
Query: 422 KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPT 601
KG E L K K +S G+GKT + +P++++V P D +Q +I P+
Sbjct: 20 KGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVITAPS 79
Query: 602 RELALQTSQICIELAK 649
RELA Q Q +LA+
Sbjct: 80 RELANQIYQEAQQLAR 95
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++F + + + EKG+E+P+ +QE IPI GK V+ +++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQ 47
>UniRef50_Q6YQC2 Cluster: Superfamily II DNA and RNA helicase; n=2;
Candidatus Phytoplasma asteris|Rep: Superfamily II DNA
and RNA helicase - Onion yellows phytoplasma
Length = 357
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
GTGKT AY +P+L ++D +K QA+I+VPT +L Q ++ ++ K
Sbjct: 41 GTGKTHAYLLPILSKIDFQKPFTQAIILVPTNDLVFQVWEMFKQIEK 87
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT + + V + VD +QALI PTRELA QT ++ + + +I+
Sbjct: 323 GTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQ 374
Score = 39.9 bits (89), Expect = 0.054
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++ +K +LL GI+ +EKPS +Q+ ++ + G DV+A+A+
Sbjct: 278 FDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQ 321
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +3
Query: 357 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACA 192
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQV--DPK-KDTIQALIVVPTRELALQTSQICIELA 646
C C + GTGKT A+ +P+LE++ PK + L++VPTRELA+Q Q+ +L+
Sbjct: 189 CACAA-TGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLS 243
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ I +L V+P+K QA+I+ PT+EL+ QT ++ L + IR
Sbjct: 50 GSGKTAAFGISLLSLVNPQKSICQAVIISPTKELSNQTLEVINTLGTRSGIR 101
Score = 33.9 bits (74), Expect = 3.5
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 399 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+L+ I++ G+E PSP+Q+ SIP + G+ + A+
Sbjct: 13 DLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQ 48
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+L + P K +ALI+ PTRELA QT + + L ++R
Sbjct: 189 GSGKTAAFLIPILHHLKKPMKCGFRALIICPTRELAKQTQREALRLGDEMNLR 241
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++ + P K +AL+V PTRELA QT + + L + ++R
Sbjct: 187 GSGKTAAFLIPIIHHLQKPMKCGFRALVVCPTRELAKQTQRESLRLCEEINLR 239
Score = 35.5 bits (78), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 324 KDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
K R++ D + E F + +L+ I + G++ P+P+Q +IP+ L G V A A
Sbjct: 125 KGRKVAVPDPIEQFRELAERFNVSNQLIKNIEDCGYKAPTPVQMQAIPVLLEGHPVHACA 184
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +3
Query: 357 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
DT + F++ LK LL G++ G+EKPS IQ+ +I + G DV+A+A+ K V
Sbjct: 26 DTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFV 85
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 470 CPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
C K ++ GTGKT + I +L+++D QALI+ PTRELA Q
Sbjct: 64 CIKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQ 49
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD--PKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ ++ D KK + +ALI+ PTRELA+Q ++ + L KH
Sbjct: 51 GTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKH 100
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 46.0 bits (104), Expect = 8e-04
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
G+GKT AY +P+ +++D K +QA+I+ PT ELA+Q ++
Sbjct: 50 GSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINK 89
Score = 37.9 bits (84), Expect = 0.22
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F++ L + L+ G+ ++G KP+ IQ +IP+AL KDV+ ++
Sbjct: 5 FDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQS 47
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ +P+L+++D Q L++ PTRELA+Q ++ AK+
Sbjct: 91 GTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKN 138
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L+ LL + E G+E PSPIQ IP L+G D+L A+
Sbjct: 46 FAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQ 89
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
GTGKT ++ +P+++ V+P+ +QA+IV PTRELA Q
Sbjct: 49 GTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQ 85
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F L LL I E+G+E+PSPIQE SIP L GKDVL A+
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQ 51
Score = 41.5 bits (93), Expect = 0.018
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ +P+L + + Q L++ PTRELA Q + +KH
Sbjct: 53 GTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAVESYSKH 100
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ +P+L+++ + ++A+IV PTRELA Q + L K+T +R
Sbjct: 48 GTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLR 100
Score = 39.5 bits (88), Expect = 0.071
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ F ++ GI + G+ P+PIQE IP AL G+DV+ A+
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQ 46
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK---KDTIQALIVVPTRELALQTSQICIELAKHT 655
GTGKT ++ +PVLEQ+ + K ++AL++ PTRELA+ Q+C + K++
Sbjct: 69 GTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAI---QVCANIQKYS 117
Score = 33.9 bits (74), Expect = 3.5
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F+ L +L I E G+ + + +Q+ IP+AL GKD++A A+
Sbjct: 23 KFDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQ 67
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
F +F L+ E+L I G+E PS +Q +IP AL KDV+ +AK K + V
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFV 183
Score = 36.3 bits (80), Expect = 0.66
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQ 619
K C++ G GKT + + +L +DP+ +QAL++ T ELA+Q
Sbjct: 166 KDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVLCNTHELAMQ 213
>UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 792
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/53 (43%), Positives = 38/53 (71%), Gaps = 6/53 (11%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK------DTIQALIVVPTRELALQTSQICIELAK 649
G+GKT AY +P++E++ ++ D I A+++VPTRELALQT ++ ++L K
Sbjct: 202 GSGKTLAYALPLVERLHSQEVKVSRSDGILAVVIVPTRELALQTYELFVKLLK 254
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FEE L + I + WEKP+PIQ SIP+AL G D++ AK
Sbjct: 127 FEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAK 170
>UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1;
Picrophilus torridus|Rep: ATP-dependent RNA helicase -
Picrophilus torridus
Length = 387
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
KS G+GKT A+ IP +++ K LI++PTRELALQT + + ++++
Sbjct: 47 KSMTGSGKTAAFLIPAIQRALGSKFFNTVLIILPTRELALQTYSVALNISRN 98
>UniRef50_P52271 Cluster: Probable ATP-dependent RNA helicase MG308;
n=3; Mycoplasma|Rep: Probable ATP-dependent RNA helicase
MG308 - Mycoplasma genitalium
Length = 410
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
G+GKT AY +P+L++++ D QA+I VPT+EL Q I E+ K+
Sbjct: 42 GSGKTFAYLLPLLDKINTSLDQPQAVIFVPTKELQWQIINILTEIKKY 89
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIV 536
F +F LK E+L I + G+E PS +Q IP A+ G D+L +AK + K + V
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFV 96
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 318 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
P ++ + + F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 79 PDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 138
Query: 498 RAK 506
A+
Sbjct: 139 MAR 141
Score = 42.3 bits (95), Expect = 0.010
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPK--KDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + +P+ E++ + +ALI+ PTRELALQT + EL K T ++
Sbjct: 143 GSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLK 196
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQV--DPKKDTI-QALIVVPTRELALQTSQICIELAKHTD 658
C C + GTGKT AY +P LE++ P + + L++VPTREL +Q Q+ +L++ T
Sbjct: 195 CGCAA-TGTGKTAAYMLPTLERLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQLSQFTS 253
Query: 659 I 661
+
Sbjct: 254 V 254
Score = 36.7 bits (81), Expect = 0.50
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDV 491
F L R LL + + P+PIQ A+IP+AL G+D+
Sbjct: 156 FYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDI 194
>UniRef50_UPI0000DB7B84 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase Dbp73D (DEAD box protein
73D), partial; n=1; Apis mellifera|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase Dbp73D
(DEAD box protein 73D), partial - Apis mellifera
Length = 439
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Frame = +2
Query: 479 WKRCTCKS*E-GTGKTGAYCIPVLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKH 652
W R TC S G+GKT AY +P+++ + + ++ L+VVP +ELA Q ++ + H
Sbjct: 94 WLRDTCVSAPTGSGKTLAYVLPIIQILQSRLVPKVRCLVVVPVQELATQVYKVFVTYTSH 153
Query: 653 TDIR 664
T+++
Sbjct: 154 TNLK 157
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +3
Query: 336 IKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
++ + +T+ F E L +L + + GW +P+ IQE +IP+ + GKD+L RA+
Sbjct: 1 MEADEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRAR 57
Score = 36.7 bits (81), Expect = 0.50
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-----IQALIVVPTRELALQTSQICIEL 643
G+GKT A+ IP+++++ K T I+ LI+ P++EL Q + I L
Sbjct: 59 GSGKTAAFTIPLIQKILSNKQTRKQQEIKGLIIAPSKELCKQIHDVIISL 108
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIVFQFWN 551
F+E LK+E++ I + G+E PS +Q IP AL +D+L +AK + K + V N
Sbjct: 35 FQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAKSGMGKTAVFVLSILN 93
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIR 664
+S GTGKT A+C+ +L V+P Q L + PT ELALQ Q+ ++ + D+R
Sbjct: 83 QSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADVR 139
Score = 39.9 bits (89), Expect = 0.054
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS 479
FEE LK ELL G+++ G+ +PS IQE ++P+ ++
Sbjct: 40 FEELRLKPELLKGVYQMGFNRPSRIQENALPLMMA 74
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +P L ++D Q L+V PTRELA+Q ++
Sbjct: 55 GTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAE 94
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD-PKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT AY +P+L ++ + +A+I PTREL +Q +LAK+TD+R
Sbjct: 52 GTGKTAAYALPILMKIKYAQGHNPRAVIFGPTRELVMQIEIAMKQLAKYTDLR 104
Score = 39.9 bits (89), Expect = 0.054
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FEE L R+LL I E G+ +P+ IQ +IP L+G D++ A+
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQ 50
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
GTGKT A+ PV++++D QALI+ PTREL LQ
Sbjct: 50 GTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQ 86
Score = 36.7 bits (81), Expect = 0.50
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDV 491
N+FE+ L LL I + G+E P+ +QE +IP+ L KD+
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLE-KDI 41
>UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA
splicing; n=1; Bigelowiella natans|Rep: UB2 probably
involved in pre-mRNA splicing - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 398
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 494 CKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD 658
C+ G GKT Y + +EQ++ +T+QAL + PTRELA+Q I +L+++ +
Sbjct: 71 CQGRPGIGKTLIYVVAFIEQINESFNTVQALSIAPTRELAIQIFWIFKKLSQNEE 125
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 473 PKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
P + ++ G+GKT + + +L ++DP T Q L++ PTREL +Q + + K+
Sbjct: 125 PPHRNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMICPTRELVVQNVSVMERMGKY 184
Query: 653 TDI 661
T I
Sbjct: 185 TGI 187
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+F E L + +L + + GW++P+ IQ +IP+ L GKDV+ RA+
Sbjct: 10 QFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRAR 54
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ L EL+ GI ++G++ P+PIQ +IP+ L G+DV+A AK
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAK 84
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT--IQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + IP+ E++ ++ T +ALI+ PTRELA+QT + EL + +++
Sbjct: 86 GSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELK 139
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ IP++ ++ + +ALIVVPTRELALQ + + K TD+
Sbjct: 346 GSGKTAAFIIPLINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKFTDL 398
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 363 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
+G FE L + I +G+ P+PIQ +IP+ L G+DV+A
Sbjct: 297 KGGGFESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVA 341
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FEE L +E++ I E W P+PIQ SIPI L G D++ AK
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAK 130
Score = 36.3 bits (80), Expect = 0.66
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 10/61 (16%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQ-----ALIVVPTRELALQT----SQICIELA-KHTD 658
G+GKT ++ IP L + ++ + L++ PTRELALQT +Q C+++ KH
Sbjct: 132 GSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCVKMGYKHVC 191
Query: 659 I 661
I
Sbjct: 192 I 192
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
GTGKT A+ IP +E P +Q +++ P+RELA+Q +LA H
Sbjct: 51 GTGKTAAFGIPAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMH 98
Score = 37.1 bits (82), Expect = 0.38
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQA 48
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 473 PKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
P K ++ G+GKT + + +L +VDP QAL + PTRELA Q ++ ++ K
Sbjct: 129 PPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKF 188
Query: 653 TDI 661
T I
Sbjct: 189 TGI 191
Score = 37.9 bits (84), Expect = 0.22
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Frame = +3
Query: 321 PKDRRIK---TSDVTDTRGNEFEEFCLKRELLMGIF-EKGWEKPSPIQEASIPIALS--G 482
P+D IK + D T + FE+ L EL+ G++ E +EKPS IQ S+P+ ++
Sbjct: 72 PEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPH 131
Query: 483 KDVLARA 503
K ++A+A
Sbjct: 132 KHLIAQA 138
>UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX31;
n=30; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX31 - Homo sapiens (Human)
Length = 851
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQ------ALIVVPTRELALQTSQICIELAK 649
+S G+GKT AYCIPV++ + + IQ AL++VPTRELALQ+ +L K
Sbjct: 274 RSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLK 330
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +3
Query: 318 PPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLA 497
P ++ + + F+ L + G+ +KG++ P+PIQ +IP+ L GKDV+A
Sbjct: 133 PDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVA 192
Query: 498 RAK 506
A+
Sbjct: 193 MAR 195
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTI--QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + IP+ E++ +AL++ PTRELALQT + EL K T ++
Sbjct: 197 GSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFTGLK 250
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
G+GKT AY +P+LE++ + QAL++VPTRELA+Q S++
Sbjct: 69 GSGKTLAYGLPLLERLKTSPEQ-QALVLVPTRELAMQVSEV 108
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 661
K KS G+GKT ++ IP+ E V+ +++ QAL++ PTRELA+Q + + + I
Sbjct: 42 KDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRI 101
Query: 662 R 664
+
Sbjct: 102 K 102
Score = 33.5 bits (73), Expect = 4.7
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F + L +E+ + G+E P+ +Q IP+AL KD++ +++
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQ 49
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQ-----ALIVVPTRELALQTSQICIELAKHTDI 661
GTGKT A+ +P+L+++ + T+Q ALI+ PTRELA Q + +KH +I
Sbjct: 48 GTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNI 103
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+FE F E+L I E G++ +P+Q+ +IP G+DVLA A+
Sbjct: 2 KFESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQ 46
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +P+L++++ + Q LI+ PTRELA+Q S+
Sbjct: 59 GTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSE 98
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
++FE L +L + G+E PSPIQE I L+ KD++ +A+
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQ 57
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT + IP LE+++ + QA+++ PTRELA Q +Q C AK
Sbjct: 51 GSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAK 97
>UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 486
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELA 646
C + G+GKT Y + + V+ K +QALIVVPTREL +Q +++ LA
Sbjct: 123 CILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLA 175
>UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-PA
- Drosophila melanogaster (Fruit fly)
Length = 594
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDT-IQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ P++ + K T ++AL++ PTRELA Q + C EL + T +R
Sbjct: 166 GSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETGLR 218
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 327 DRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
D R +T+DV +F + L +L G+ + PSPIQ +IP+A G D+L +AK
Sbjct: 8 DERPRTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAK 67
Query: 507 ----KELVKLVLI 533
K LV VLI
Sbjct: 68 SGTGKTLVFTVLI 80
Score = 35.9 bits (79), Expect = 0.88
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQI 631
GTGKT + + + E +P Q+L VVPTRE+A+Q +
Sbjct: 69 GTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDV 109
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK----DTIQALIVVPTRELALQTSQICIELAKHT 655
G+GKT A+ +PV+E++ +K D + ALI+ PTRELA+Q ++ ++ HT
Sbjct: 88 GSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHT 140
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 333 RIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+I D T+ F++ + L G+ E + K + IQ SIP++L G DVLA AK
Sbjct: 29 KIDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAK 86
>UniRef50_UPI00004989D1 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 500
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT AY +P+L+ ++P + IQ +I++PT LALQ S + L K
Sbjct: 113 GSGKTLAYTLPLLKLINPLFNHIQVVILIPTLPLALQVSNVMKPLLK 159
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIEL 643
G+GKT AY +P+ ++D +QA++ +P+RELA Q Q+ +L
Sbjct: 50 GSGKTHAYLVPIFNEIDEAAHYVQAIVTLPSRELADQLYQVARKL 94
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQ-VDPKKDT---IQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT A+ IPVL ++ KK I L++ PTRELA+Q S++ ++ +T +R
Sbjct: 48 GTGKTAAFVIPVLNTLINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLR 103
Score = 36.3 bits (80), Expect = 0.66
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLVLIVFQFWN 551
+FE + L + + E G+ +P+ IQ SIP L+G+DVLA A+ K V N
Sbjct: 2 KFESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLN 61
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2
Query: 392 EARIVDGYF*KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKD 571
+A I +G +G+ + + K K +S G+GKT AY +P+ +++D K
Sbjct: 11 DADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKR 70
Query: 572 TIQALIVVPTRELALQ 619
QALI+ PT EL +Q
Sbjct: 71 ETQALILAPTHELVMQ 86
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/44 (27%), Positives = 30/44 (68%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F++ + ++ G+ ++G + P+ IQ+ +IP+AL KD++ +++
Sbjct: 5 FDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQ 48
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD--PKKDTIQALIVVPTRELALQTSQICIELAKHT 655
GTGKT A+ IP++E+++ P QALI+ PTRELA+Q E+AK T
Sbjct: 51 GTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRD---EIAKLT 98
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQAR 49
>UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5;
Bacteroidetes|Rep: ATP-independent RNA helicase -
Flavobacteria bacterium BAL38
Length = 463
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/48 (37%), Positives = 32/48 (66%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKH 652
G+GKT A+ +P+ + ++ + +Q LI+VP+REL LQ Q+ ++ H
Sbjct: 43 GSGKTLAFLLPIFQMMEEEVKGVQCLILVPSRELGLQIEQVWKKMGTH 90
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
GTGKT A+ +P+L ++D Q L++ PTRELA+Q ++
Sbjct: 71 GTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAE 110
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F E L +L + G+E PSPIQ SIP L+G +L A+
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQ 69
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
+S GTGKT Y I V++ +P + A+IVVPTRELA+Q L K
Sbjct: 68 QSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCK 118
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 339 KTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK---- 506
++SDV + FEE L R LL G+ + P+ IQ A+IP+AL+ D++ ++K
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 507 KELVKLVLIVFQF 545
K L+ ++ +V F
Sbjct: 75 KTLIYVIAVVQSF 87
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT + + +L +V+ +QAL + PTRELA Q Q+ +L + T I+
Sbjct: 147 GSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLGQFTQIK 198
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
G+GKT + IP+L+ + K + AL++ PTREL +Q SQ
Sbjct: 203 GSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQISQ 242
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +3
Query: 330 RRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVL 494
+ + T++ + + FE+ + E+L I E GW+KP+ IQ +P A KD++
Sbjct: 143 KNLVTNEEREKQNVTFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDII 197
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 360 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
T + + L R L+ +F+ G++ PS IQ IP+AL GKD+LA A+
Sbjct: 122 TSDTNWSDLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAE 170
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 249 YQQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKG 428
Y K ++D + V SK P+ + K + F E L L+ + ++
Sbjct: 270 YNAMKRKLDSKDEPVAATSK----PEPKPAKAEKPSTEAEPSFAELGLDPRLVQAVAKQS 325
Query: 429 WEKPSPIQEASIPIALSGKDVLARAK 506
+EKP+ +Q +IP+AL G+DVL +AK
Sbjct: 326 FEKPTLVQRKAIPLALQGQDVLCKAK 351
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Frame = +2
Query: 494 CKS*EGTGKTGAYCIPVLEQVDPKKDTIQA-----LIVVPTRELALQ 619
CK+ G+GKT AY +PVL + +K T A LI+VPTRELA Q
Sbjct: 348 CKAKTGSGKTAAYVLPVLSAILKRKSTDPAPFTAGLILVPTRELADQ 394
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +3
Query: 342 TSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
T D + F E L R LL G++KP+PIQ A IP+AL+G+D+ A A
Sbjct: 158 TVDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASA 211
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKD-TIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P LE++ PK+ + LI+ PTRELA+Q + LA+ TDI+
Sbjct: 214 GSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIK 268
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 470 CPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
C K ++ GTGKT + I +L+Q++ + QAL++ PTRELA Q ++ + L
Sbjct: 67 CIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD 126
Query: 650 H 652
+
Sbjct: 127 Y 127
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A+
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQ 78
>UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DRS1 -
Ustilago maydis (Smut fungus)
Length = 932
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 345 SDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
S T+ + F F L R +L + + KP+PIQ +IPIAL+GKD++A A
Sbjct: 325 SKSTNDAESSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGA 377
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVD-------PKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP +E++ P + + LI+ PTRELA+Q + +AK TDIR
Sbjct: 380 GSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTDIR 438
>UniRef50_Q6BZR4 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase DBP9
- Yarrowia lipolytica (Candida lipolytica)
Length = 544
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +2
Query: 491 TCKS*EGTGKTGAYCIPVLEQV----DPKKDTIQALIVVPTRELALQTSQICIELAK 649
T K+ G+GKT AY +P+ E + K+D ALIVVPTREL Q S++ +L +
Sbjct: 51 TAKAVTGSGKTVAYLLPIFELMLRAEKEKRDIQTALIVVPTRELCEQVSKVITKLTQ 107
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQ--VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P+LE+ V K +A+I+ P+RELALQT ++ + + TD+R
Sbjct: 149 GSGKTAAFVLPMLEKLKVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLR 202
Score = 40.3 bits (90), Expect = 0.041
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3
Query: 390 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
L + +L I KG+++P+PIQ +IP+ L GKDV+ A+
Sbjct: 109 LSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMAR 147
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQA--LIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP++E++ + A +I+ P+RELALQT ++ E + TD+R
Sbjct: 125 GSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRGTDLR 178
Score = 41.1 bits (92), Expect = 0.023
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +3
Query: 273 DKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQ 452
D DD + + + + + +G F+ L LL I +KG++ P+PIQ
Sbjct: 46 DDGSDDEAFIAAKQAAANRKNANAPGKSGKKGGGFQAMGLNVALLKAIAQKGFKIPTPIQ 105
Query: 453 EASIPIALSGKDVLARAK 506
++P+ L G DV+ A+
Sbjct: 106 RKAVPLILQGDDVVGMAR 123
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
C ++ GTGKT A+ +P+L + K+ +ALI+ PTRELALQ + A++ ++R
Sbjct: 12 CLIQAKTGTGKTAAFGLPILNSL---KEGEKALILAPTRELALQIRDNFRDFARYLNVR 67
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK---DTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P+L+ + K +ALI+VPTRELA Q + C LAK T I+
Sbjct: 47 GSGKTAAFVVPMLQHLLTHKAPNSGTRALILVPTRELAKQLLKQCQALAKFTGIQ 101
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKD---TIQALIVVPTRELALQTSQ 628
GTGKT A+ +P+L+++ P T AL++VPTRELA+Q ++
Sbjct: 83 GTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAE 125
Score = 40.3 bits (90), Expect = 0.041
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 354 TDTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
T N FE L L+ + G+E+P+PIQ A++P L GKD+L A
Sbjct: 31 TSAADNTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIA 80
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
F+E L R L G++KP+PIQ A IPIA++G+DV RA
Sbjct: 150 FDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRA 192
Score = 42.3 bits (95), Expect = 0.010
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV---DPKKDTI-QALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ +P LE++ P+ L++VPTRELA+Q Q+ LA+ T IR
Sbjct: 195 GSGKTAAFMLPQLERMLHRGPRPAAATHVLVLVPTRELAVQVHQMTESLAQFTTIR 250
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTDI 661
G+GKT A+ +P+L+++ + D ++ALIV PTRELALQ + +A +T I
Sbjct: 65 GSGKTLAFALPILQRLLSQGIDVLRALIVAPTRELALQVCAMMRAVAVYTKI 116
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
Frame = +2
Query: 497 KS*EGTGKTGAYCIPVLEQVDP------KKDTIQALIVVPTRELALQTSQICIELAK 649
+S G+GKT AY +P++E + +KD + AL++VPTREL +QT ++ +L K
Sbjct: 371 RSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVK 427
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +2
Query: 488 CTCKS*EGTGKTGAYCIPVLEQV--DP--KKDTIQALIVVPTRELALQTSQICIELAKHT 655
C C + GTGKT AY +P LE++ P K + L++VPTREL Q Q+ +L + T
Sbjct: 198 CGCAA-TGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFT 256
Query: 656 DI 661
I
Sbjct: 257 TI 258
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDV 491
F + L R L+ I G+ P+PIQ ++IP+AL G+D+
Sbjct: 159 FYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDI 197
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 363 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+G F+ F L++ LL I ++G+ P+PIQ +IP L G DV+A A+
Sbjct: 20 KGGGFQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMAR 67
Score = 37.9 bits (84), Expect = 0.22
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLE--QVDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
G+GKT A+ IP+L + K I+ L++ PTREL+LQ + L K D+R
Sbjct: 69 GSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLR 122
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 482 KRCTCKS*E-GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHTD 658
K+ C + E G+GKTGAY +P+ + + AL+ PTRELA Q + ++ K
Sbjct: 43 KKDICGTAETGSGKTGAYMLPIFHHMWENPHSFFALVFAPTRELATQIDHVTRDIGKDIK 102
Query: 659 IR 664
+R
Sbjct: 103 VR 104
>UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Trichomonas vaginalis G3|Rep: Type
III restriction enzyme, res subunit family protein -
Trichomonas vaginalis G3
Length = 505
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT + IP+L V K++ ALI+ PT LA QT+ +C +L K TDI+
Sbjct: 163 GTGKTLCFLIPLLYHVLAQGKQEGPTALILSPTELLARQTTLVCHQLIKSTDIK 216
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
G+GKT A+ +PV+ + P+ T ALI+ PTRELA+Q + EL +
Sbjct: 250 GSGKTAAFLLPVIIRALPEDKTPSALILTPTRELAIQIERQAKELMR 296
Score = 37.1 bits (82), Expect = 0.38
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARA 503
+FE L + + G+E P+PIQ IP+ L G+D+LA A
Sbjct: 204 DFEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASA 247
>UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-8 -
Neurospora crassa
Length = 626
Score = 44.4 bits (100), Expect = 0.003
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 476 KWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAK 649
K + C S G+GKT A+ +P+L+Q I +I+ PTRELALQ + I L++
Sbjct: 231 KGRDCIGGSRTGSGKTVAFAVPILQQWAANPSAIFGVILTPTRELALQIMEQVIALSQ 288
>UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3561-PA - Tribolium castaneum
Length = 446
Score = 44.0 bits (99), Expect = 0.003
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +2
Query: 392 EARIVDGYF*KGMGEAISYSRGLNSYCPKWKRCTCKS*EGTGKTGAYCIPVLEQV----D 559
++++++ + + A + S K K + G+GKT AY +P++ +
Sbjct: 94 DSKLIEALKKRNIETATDFQANAFSLFDKNKHLLLAAETGSGKTIAYLLPIICNLITNKT 153
Query: 560 PKKDTIQALIVVPTRELALQTSQICIELAK 649
PK +T QALI+VP RELA Q ++ LA+
Sbjct: 154 PKLNTPQALILVPNRELAYQVGEVAEALAE 183
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Frame = +2
Query: 509 GTGKTGAYCIPV----LEQVDP-KKDTIQALIVVPTRELALQTSQICIELAKHTD 658
G+GKT A+ +P+ ++QV K+ + AL++ PTRELA Q +I ++LA H +
Sbjct: 56 GSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLE 110
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +2
Query: 476 KWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQICIELAKHT 655
K K +S G+GKT A+ + L+ ++ K Q +I+V TRELA QT+ I EL +
Sbjct: 61 KGKNLVMQSQSGSGKTMAFLLSTLQLINRKDPFCQVIIIVNTRELARQTASIFDELTELM 120
Query: 656 D 658
D
Sbjct: 121 D 121
Score = 36.7 bits (81), Expect = 0.50
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +3
Query: 327 DRRIKTSDVT----DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVL 494
D IK D+ + + F+E L ++L GI G+ PS IQ +IPI L GK+++
Sbjct: 7 DNIIKDEDIIVKGGEGKATSFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKGKNLV 66
Query: 495 ARAK 506
+++
Sbjct: 67 MQSQ 70
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 470 CPKWKRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQIC 634
C K ++ GTGKT + I +L+Q++ + QAL++ PTRELA Q C
Sbjct: 69 CIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQWRSSC 123
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A+
Sbjct: 35 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQ 80
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKK-DTIQALIVVPTRELALQTSQICIELAKHTD 658
GTGKT A+ IPV+ + K I AL++ PTREL +Q ++ +L KH++
Sbjct: 48 GTGKTVAFLIPVIHNILTKGIQGIAALVLAPTRELTMQIAEEAKKLLKHSE 98
Score = 40.7 bits (91), Expect = 0.031
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +3
Query: 372 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKKELVKLV 527
+FEE + +LL I E G+ + +PIQE SIP L GKD+ A+ K V
Sbjct: 2 KFEELSIHPKLLSAIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTV 53
>UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4;
Mollicutes|Rep: ATP-dependent RNA helicase - Mesoplasma
florum (Acholeplasma florum)
Length = 460
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV--DPKKDTIQALIVVPTRELALQ 619
GTGKT A+ +P+L + D K +QALI+ PTRELA Q
Sbjct: 54 GTGKTHAFLLPILNNLRFDQDKKNVQALIIAPTRELAKQ 92
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQTSQ 628
G+GKT A+ +P+LE+ P +QAL++ PTRELA Q +Q
Sbjct: 52 GSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQ 90
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQAR 50
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/46 (39%), Positives = 32/46 (69%)
Frame = +3
Query: 369 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSK 49
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 482 KRCTCKS*EGTGKTGAYCIPVLEQVDPKKDTIQALIVVPTRELALQ 619
K KS G+GKT A+ IP+ E + +++ QAL++ PTRELA Q
Sbjct: 42 KDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQ 87
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 GTGKTGAYCIPVLEQV-DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIR 664
GTGKT AY +P+++++ + ++ L++ PTRELA Q S L + IR
Sbjct: 48 GTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIR 100
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 375 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAK 506
FE F ++ G+ G+++P+PIQ +IP ++G DV+ A+
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQ 46
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,612,005
Number of Sequences: 1657284
Number of extensions: 9598242
Number of successful extensions: 25938
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 24063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25565
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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