Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00078
         (720 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.6  
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.     29   8.4  
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA...    29   8.4  

>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 395 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 303
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
          Length = 3503

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 510 APDSRGSTVSISLPDSARLASAL-EAFRHNPADGSS 406
           AP+   S V IS+P+SA L + L  A  H+   GSS
Sbjct: 875 APEFEASMVRISVPESAELGAPLYAAHAHDKDSGSS 910


>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
            protein.
          Length = 3556

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 510  APDSRGSTVSISLPDSARLASAL-EAFRHNPADGSS 406
            AP+   S V IS+P+SA L + L  A  H+   GSS
Sbjct: 928  APEFEASMVRISVPESAELGAPLYAAHAHDKDSGSS 963


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,342,282
Number of Sequences: 53049
Number of extensions: 706826
Number of successful extensions: 1847
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)