Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00077
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    28   0.092
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    28   0.092
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.16 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.0  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 505 FLCRLCKQRFLETKQRTIHLRV 440
           + CRLCK+ F ++   T HLR+
Sbjct: 78  YRCRLCKKAFSDSSTLTKHLRI 99



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 505 FLCRLCKQRFLETKQRTIHLR 443
           F C +C +RF ++   T H+R
Sbjct: 50  FRCPVCDRRFSQSSSVTTHMR 70



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 499 CRLCKQRFLETKQRTIHLRV 440
           C+LC  RF ++     H+RV
Sbjct: 108 CKLCLLRFSQSGNLNRHMRV 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 505 FLCRLCKQRFLETKQRTIHLRV 440
           + CRLCK+ F ++   T HLR+
Sbjct: 334 YRCRLCKKAFSDSSTLTKHLRI 355



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 505 FLCRLCKQRFLETKQRTIHLR 443
           F C +C +RF ++   T H+R
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMR 326



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 583 NVIPNMLKFCSKAFKSPLNLLVSLR 657
           N  PN+ + C K++  P  L   LR
Sbjct: 246 NQKPNVCRICGKSYARPSTLKTHLR 270



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 499 CRLCKQRFLETKQRTIHLRV 440
           C+LC  RF ++     H+RV
Sbjct: 364 CKLCLLRFSQSGNLNRHMRV 383


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 623 KAFEQNFNIFGITFVKYIIFVIYAQIESAG 534
           K+F  NF IF +  V  ++F  Y  I S G
Sbjct: 111 KSFRMNFAIFNLYMVLLLLFDAYLWISSVG 140


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 454 LYAVLFPENAVYIIDIEK 507
           L+ +L PE  VY ++IEK
Sbjct: 311 LWIILVPEEQVYHLEIEK 328


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 39  NASIRPPTCGRSC 77
           N   RPP CG++C
Sbjct: 554 NGDNRPPDCGQNC 566


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -1

Query: 505 FLCRLCKQRFLETKQRTIHLR 443
           F C +C +RF+ +     H++
Sbjct: 375 FACPICNKRFMRSDHLAKHVK 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,146
Number of Sequences: 336
Number of extensions: 4090
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)