Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00076
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 136 2e-32
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 60 2e-09
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 57 1e-08
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 55 7e-08
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 49 5e-06
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 46 5e-05
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 41 0.001
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 40 0.002
11_06_0178 + 20942757-20942801,20943790-20943867,20943930-209440... 37 0.016
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 33 0.34
02_02_0480 + 10799242-10799365,10799748-10800044,10800081-108002... 31 1.0
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 30 1.8
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 30 2.4
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 29 4.2
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 29 5.6
06_01_0905 - 6974369-6974456,6974647-6974777 29 5.6
03_02_0091 + 5574528-5577254 29 5.6
03_06_0130 + 31893599-31894106,31894230-31894354,31894414-318945... 28 7.4
06_03_0103 + 16678371-16678577,16678750-16679517 28 9.8
02_03_0026 - 14045653-14045874,14047023-14047215,14047518-140476... 28 9.8
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 28 9.8
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 136 bits (328), Expect = 2e-32
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = +3
Query: 501 GVRVNSVDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680
G V+SVDDLTED LG+AGLVYEH LGE+K+TF+E KNP+S TILIKGPN HT+ QIKD
Sbjct: 349 GEAVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKD 408
Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEI 761
AVRDGLR++ N +ED+ V+ GA AFE+
Sbjct: 409 AVRDGLRSVKNTVEDEAVVLGAGAFEV 435
Score = 130 bits (314), Expect = 1e-30
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +1
Query: 256 FFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAK 435
FFY +AE REK+VAAER +D+RV++I+ LK K+C G DK FVVINQKGIDP SLD A+
Sbjct: 267 FFYSNAEQREKMVAAERRQVDERVKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLAR 326
Query: 436 EGIIGLRRAKRRNMERLALACGGSVL 513
GIIGLRRAKRRNMERL LACGG +
Sbjct: 327 AGIIGLRRAKRRNMERLVLACGGEAV 352
Score = 123 bits (297), Expect = 1e-28
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +2
Query: 5 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 184
LAD LTD V+AVL IR P +P+DL MVEIM M+HK +T LV+GLV+DHG+RHPDM +
Sbjct: 183 LADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKR 242
Query: 185 RVENAYILTCNVSLEYEKTEVNS 253
R EN YILTCNVSLEYEK+E+N+
Sbjct: 243 RAENCYILTCNVSLEYEKSEINA 265
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +3
Query: 504 VRVNSVDDLTEDALGF-AGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680
V VN ++L E +G AGL +G++ FTF+ CK+P++ T+L++G +K L +++
Sbjct: 332 VIVNRPEELQESDVGTRAGLFEVKKIGDEFFTFIVDCKDPKACTVLLRGASKDVLNEVER 391
Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEIKLT 770
++D + N +++ ++PG A E+ ++
Sbjct: 392 NLQDAMSVARNILKNPKLLPGGGATELTVS 421
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 274 EDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGL 453
ED + L+ E E+I +I+ K L V+ +KG+ L++ +K G+ +
Sbjct: 264 EDWQVLLEMEEEYIKNLCAQILKFKPDL---------VVTEKGLSDLAIHYLSKAGVSAI 314
Query: 454 RRAKRRNMERLALACGGSVL 513
RR ++ + R+A ACG ++
Sbjct: 315 RRLRKTDNNRIAKACGAVIV 334
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +3
Query: 525 DLTEDALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL 698
+L+ + LG AG+V E G +D+ ++EQC N ++VTI I+G NK + + K ++ D L
Sbjct: 343 ELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDAL 402
Query: 699 RAINNAIEDKCVIPGAAAFEI 761
N I + ++ G + EI
Sbjct: 403 CVARNLIRNNSIVYGGGSAEI 423
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 17 LTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVE 193
L + V AVL + K V+L ++++ +T LV G+++D HP MPKR+E
Sbjct: 181 LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIE 240
Query: 194 NA--YILTCNVSLEYEKTE 244
+A ILTC KT+
Sbjct: 241 DAKIAILTCPFEPPKPKTK 259
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +3
Query: 504 VRVNSVDDLTEDALGF-AGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680
V VN ++L E +G AGL G++ F F+ CK+P++ T+L++G +K L +++
Sbjct: 332 VIVNRPEELQESDVGTGAGLFEVKKFGDEFFAFIVDCKDPKACTVLLRGASKDVLNEVER 391
Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEIKLT 770
++D + N ++ ++PG A E+ ++
Sbjct: 392 NLQDAMSMARNIWKNPKLLPGGGATELTVS 421
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +1
Query: 274 EDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGL 453
ED + ++ E E+I+ +I+ K L VI +KG+ L++ K G+ +
Sbjct: 264 EDWQVMLQMEEEYIENLCAQILKFKPDL---------VITEKGLSDLAVHYLGKAGVSAI 314
Query: 454 RRAKRRNMERLALACGGSVL 513
RR ++ + R+A ACG ++
Sbjct: 315 RRLRKTDNNRIAKACGAVIV 334
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +3
Query: 537 DALGFAGLVYEHVLGEDKFTFVEQCKNPQSV-TILIKGPNKHTLTQIKDAVRDGLRAINN 713
D LG+A V +G + T V+ + SV T++++G L ++ AV DG+ +
Sbjct: 340 DELGYADSVSVEEIGGARVTVVKNEEGGNSVATVVLRGSTDSILDDLERAVDDGVNTYKS 399
Query: 714 AIEDKCVIPGAAAFEIKLTR 773
D +IPGAAA EI+L R
Sbjct: 400 MCRDSRIIPGAAATEIELAR 419
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +2
Query: 8 ADVLTDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHGARHP-DM 178
+ +L+ VDA L++ P P +DL + +++ T +T L++GL+ D A H
Sbjct: 174 SSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDTELIRGLIFDKKASHAAGG 233
Query: 179 PKRVENAYILTCNVSLEYEKTEVNSA 256
P RVENA I + KT++ +
Sbjct: 234 PTRVENAKIAVIQFQVSPPKTDIEQS 259
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 510 VNSVDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKN-PQSVTILIKGPNKHTLTQIKDAV 686
+ +++ ED LG+A LV E +GE K + K+ ++ T+L++G N+ + + + ++
Sbjct: 341 IANIEHFREDKLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLVIDEAERSL 400
Query: 687 RDGLRAI 707
D L I
Sbjct: 401 HDALCVI 407
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 495 VRGVRVNSVDDLTEDA-LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQ 671
V G + S D E LG ++ E ++GEDK Q+ TI+++G ++H L +
Sbjct: 319 VTGGDIASTFDNPESVKLGHCNVIEEIMIGEDKLIHFSGVAMGQACTIVLRGASEHVLDE 378
Query: 672 IKDAVRDGLRAINNAIEDKCVIPGAAAFEIKLTR 773
+ ++ D L ++ + D V+ G E+ + +
Sbjct: 379 AERSLHDALCVLSQTVNDTRVLFGGGWPEMVMAK 412
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/82 (25%), Positives = 44/82 (53%)
Frame = +2
Query: 11 DVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRV 190
+ + VDAVL ++ +L ++I+++ + ++ L +G ++D PKR+
Sbjct: 170 EYFAELAVDAVLRLKGS---TNLEAIQILKIPGGSLKDSFLDEGFILDKKIGL-GQPKRI 225
Query: 191 ENAYILTCNVSLEYEKTEVNSA 256
ENA IL N +++ +K ++ A
Sbjct: 226 ENAKILVANTAMDTDKVKIYGA 247
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +1
Query: 286 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 465
++ AAE++ + ++V+KI+ G + +N++ I + FA GI+ + A
Sbjct: 259 EIEAAEKQKMREKVQKIIG------HGIN---CFVNRQLIYNFPEELFADAGILAIEHAD 309
Query: 466 RRNMERLALACGGSV 510
+ERLAL GG +
Sbjct: 310 FEGIERLALVTGGDI 324
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 495 VRGVRVNSVDDLTEDA-LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQ 671
V G + S D E LG ++ E ++GED+ + Q+ TI+++G ++H L +
Sbjct: 296 VTGGDIASTFDNPESVKLGHCKVIEEIMIGEDRLIHFSGVEMGQACTIVLRGASEHVLDE 355
Query: 672 IKDAVRDGLRAINNAIEDKCVIPGAAAFEIKLTR 773
+ ++ D L ++ + D V+ G E+ + +
Sbjct: 356 AERSLHDALCVLSQTVNDTRVLYGGGWPEMVMAK 389
Score = 35.9 bits (79), Expect = 0.037
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +2
Query: 32 VDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAYILT 211
VDAVL ++ +L ++I++ + ++ L +G ++D PKR+ENA IL
Sbjct: 154 VDAVLRLKGS---TNLEAIQILKKTGGSLKDSFLDEGFILDKKIGL-GQPKRIENAKILV 209
Query: 212 CNVSLEYEKTEVNSA 256
N +++ +K ++ A
Sbjct: 210 ANTAMDTDKVKIYGA 224
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +1
Query: 286 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 465
++ AAE++ + ++V+KI+ G + +N++ I + FA GI+ + A
Sbjct: 236 EIEAAEKQKMREKVQKIIG------HGIN---CFVNRQLIYNFPEELFADAGILAIEHAD 286
Query: 466 RRNMERLALACGGSV 510
+ERLAL GG +
Sbjct: 287 FEGIERLALVTGGDI 301
>11_06_0178 +
20942757-20942801,20943790-20943867,20943930-20944025,
20944114-20944221,20944322-20944420
Length = 141
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +3
Query: 537 DALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNA 716
D LG+A V +G + E+ +N ++ +L +G L + AV DG+ +
Sbjct: 56 DELGYADSVSLEDIGGVRN---EEGRNSVAIAVL-RGSTDSILDDLGRAVDDGVNTYKSM 111
Query: 717 IEDKCVIPGAAAFEIKLTR 773
D +IPGAAA EI+L +
Sbjct: 112 CRDSRIIPGAAATEIELAK 130
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL-RAINNAIEDKCVI-PGAAAFEIKL 767
F E C P TIL+KG N L ++K V+ G+ A + A+E ++ GA E+ L
Sbjct: 624 FFEGCPKPLGCTILLKGANGDELKKVKHVVQYGVFAAYHLALETSFLVDEGATLPELPL 682
>02_02_0480 +
10799242-10799365,10799748-10800044,10800081-10800248,
10800525-10800805,10800860-10801205,10801425-10801428,
10801533-10801575
Length = 420
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 152 DHGARHPDMPKR--VENAYILTCNVSLEYEKT 241
D A HPD R V +AY L CN+SL+ EK+
Sbjct: 175 DFLAWHPDKTGRFSVRSAYSLACNISLDVEKS 206
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL-RAINNAIEDKCVI-PGAAAFEIKL 767
F E C P T+L+KG + L +IK V+ G+ A + A+E + GA EI L
Sbjct: 604 FFEGCPKPLGCTVLLKGGSMDELKKIKHVVQYGIFAAYHLALETSFLADEGATLPEIPL 662
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 134 VKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSAS 259
VKG+V +H M +NA +L +LEY+K AS
Sbjct: 349 VKGIVCSKNVKHKRMVSEHQNATLLILGGALEYQKVSNKLAS 390
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 600 VEQCKNPQSVTILIKGPNK-HTLTQIKDAVR-DGLR 701
VE C NP V+ IK PNK T+ ++++ VR GLR
Sbjct: 844 VESC-NPHCVSFFIKDPNKVRTIDEMRERVRMRGLR 878
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 119 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSAS 259
+++ LV+G+V +H M NA +L +LEY+K AS
Sbjct: 327 SDSNLVRGVVCSKNVKHKRMASEHVNAKLLILGGALEYQKVTNKLAS 373
>06_01_0905 - 6974369-6974456,6974647-6974777
Length = 72
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 386 LSTKKESTPCHWMLLP 433
+S KKES+P HW +LP
Sbjct: 56 ISGKKESSPLHWKILP 71
>03_02_0091 + 5574528-5577254
Length = 908
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 678 DAVRDGLRAINNAIEDKCVIPGAAAFEIKL 767
+AVR GL +N E ++PG A E+KL
Sbjct: 454 EAVRTGLAVLNELEEANLLLPGDATGEVKL 483
>03_06_0130 +
31893599-31894106,31894230-31894354,31894414-31894538,
31894645-31894704,31895294-31895378
Length = 300
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2
Query: 583 SPSTCS*TRPAKPKASSVRSSTELTRTPRTLGLDVP 476
+P+T + TRP + + S+ R+S E +R P+ L D+P
Sbjct: 33 APATETATRPLRRRTSAARASRESSRQPQALP-DLP 67
>06_03_0103 + 16678371-16678577,16678750-16679517
Length = 324
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 676 LICVKVCLLGPLMRM-VTDCGFLHCSTKVNLSSPSTCS*TRPAKPKAS 536
+I L GPL+R+ DC C V LSS + R AKP S
Sbjct: 47 IIAAAPSLAGPLLRLHFHDCFVRGCDASVLLSSAGGNTAERDAKPNKS 94
>02_03_0026 - 14045653-14045874,14047023-14047215,14047518-14047618,
14050145-14050272,14050409-14050502,14050749-14051237,
14052622-14052915,14053602-14053732,14053829-14055440,
14055539-14055651,14055902-14056933,14057023-14057145,
14057250-14057688
Length = 1656
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +1
Query: 265 KSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKG 402
+S ++ E A + E QRV+ V + +++ D K+ V I+Q+G
Sbjct: 1347 QSVQELEGYAAYKAEETTQRVQGCVRIAEEMRDTASKSLVTIHQQG 1392
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 519 VDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKH 659
+ DL ED +G A E ++G T+ E T++ K PNKH
Sbjct: 544 IKDLQEDFMGGA----EIIVGPPIITYRETVTKNSCRTVMSKSPNKH 586
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,041,323
Number of Sequences: 37544
Number of extensions: 389329
Number of successful extensions: 1136
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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