BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00076 (791 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 142 2e-34 At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 142 3e-34 At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 64 8e-11 At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 58 5e-09 At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 58 5e-09 At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 47 1e-05 At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 45 5e-05 At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 38 0.008 At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina... 33 0.29 At5g19790.1 68418.m02352 AP2 domain-containing protein RAP2.11 (... 32 0.50 At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 30 1.5 At1g48570.1 68414.m05431 zinc finger (Ran-binding) family protei... 30 2.0 At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 29 4.7 At5g54330.1 68418.m06766 hypothetical protein contains Pfam prof... 28 6.2 At5g22720.1 68418.m02654 F-box family protein contains F-box dom... 28 8.2 >At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-PROT:P80317- T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 142 bits (344), Expect = 2e-34 Identities = 64/87 (73%), Positives = 74/87 (85%) Frame = +3 Query: 501 GVRVNSVDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680 G VNSVDDLT D LG+AGLVYEHVLGE+K+TFVEQ KNP S TILIKGPN HT+ QIKD Sbjct: 333 GEAVNSVDDLTPDCLGWAGLVYEHVLGEEKYTFVEQVKNPHSCTILIKGPNDHTIAQIKD 392 Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEI 761 AVRDGLR++ N +ED+CV+ GA AFE+ Sbjct: 393 AVRDGLRSVKNTLEDECVVLGAGAFEV 419 Score = 124 bits (300), Expect = 5e-29 Identities = 56/86 (65%), Positives = 68/86 (79%) Frame = +1 Query: 256 FFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAK 435 FFY +AE RE +V AER +D+RV+KI+ LK K+C G D +FV++NQKGIDP SLD A+ Sbjct: 251 FFYSNAEQREAMVTAERRSVDERVQKIIELKNKVCAGNDNSFVILNQKGIDPPSLDLLAR 310 Query: 436 EGIIGLRRAKRRNMERLALACGGSVL 513 EGII LRRAKRRNMERL LACGG + Sbjct: 311 EGIIALRRAKRRNMERLVLACGGEAV 336 Score = 120 bits (288), Expect = 1e-27 Identities = 54/83 (65%), Positives = 68/83 (81%) Frame = +2 Query: 5 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 184 LAD LTD V++VL IR P +P+DL MVEIM M+HK +T LV+GLV+DHG+RHPDM + Sbjct: 167 LADQLTDIVVNSVLCIRKPQEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKR 226 Query: 185 RVENAYILTCNVSLEYEKTEVNS 253 R EN +ILTCNVSLEYEK+E+N+ Sbjct: 227 RAENCHILTCNVSLEYEKSEINA 249 >At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-PROT:P80317 T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 142 bits (343), Expect = 3e-34 Identities = 64/87 (73%), Positives = 75/87 (86%) Frame = +3 Query: 501 GVRVNSVDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680 G VNSVDDLT ++LG+AGLVYEHVLGE+K+TFVEQ KNP S TILIKGPN HT+ QIKD Sbjct: 332 GEAVNSVDDLTPESLGWAGLVYEHVLGEEKYTFVEQVKNPNSCTILIKGPNDHTIAQIKD 391 Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEI 761 AVRDGLR++ N IED+CV+ GA AFE+ Sbjct: 392 AVRDGLRSVKNTIEDECVVLGAGAFEV 418 Score = 124 bits (298), Expect = 9e-29 Identities = 59/86 (68%), Positives = 69/86 (80%) Frame = +1 Query: 256 FFYKSAEDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAK 435 FFY +AE RE +V AER +D+RV+KI+ LKKK+C G + FVVINQKGIDP SLD A+ Sbjct: 251 FFYSNAEQREAMVTAERRSVDERVKKIIELKKKVC-GDNDNFVVINQKGIDPPSLDLLAR 309 Query: 436 EGIIGLRRAKRRNMERLALACGGSVL 513 EGIIGLRRAKRRNMERL LACGG + Sbjct: 310 EGIIGLRRAKRRNMERLVLACGGEAV 335 Score = 116 bits (280), Expect = 1e-26 Identities = 53/83 (63%), Positives = 67/83 (80%) Frame = +2 Query: 5 LADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPK 184 LAD LTD V++VL IR P + +DL MVEIM M+HK +T LV+GLV+DHG+RHPDM + Sbjct: 167 LADQLTDIVVNSVLCIRKPEEAIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKR 226 Query: 185 RVENAYILTCNVSLEYEKTEVNS 253 R EN +ILTCNVSLEYEK+E+N+ Sbjct: 227 RAENCHILTCNVSLEYEKSEINA 249 >At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-PROT:P50143- T-complex protein 1, gamma subunit (TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 555 Score = 64.5 bits (150), Expect = 8e-11 Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 1/90 (1%) Frame = +3 Query: 504 VRVNSVDDLTEDALGF-AGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKD 680 V VN D+L E +G AGL +G+D F+F+ CK P++ T+L++GP+K + +++ Sbjct: 330 VIVNRPDELQESDIGTGAGLFEVKKIGDDFFSFIVDCKEPKACTVLLRGPSKDFINEVER 389 Query: 681 AVRDGLRAINNAIEDKCVIPGAAAFEIKLT 770 ++D + N I++ ++PG A E+ ++ Sbjct: 390 NLQDAMSVARNIIKNPKLVPGGGATELTVS 419 Score = 42.3 bits (95), Expect = 4e-04 Identities = 25/80 (31%), Positives = 42/80 (52%) Frame = +1 Query: 274 EDREKLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGL 453 ED E L+ E E+I+ +I+ K L VI +KG+ L+ F+K G+ + Sbjct: 262 EDWEVLLKLEEEYIENICVQILKFKPDL---------VITEKGLSDLACHYFSKAGVSAI 312 Query: 454 RRAKRRNMERLALACGGSVL 513 RR ++ + R+A ACG ++ Sbjct: 313 RRLRKTDNNRIAKACGAVIV 332 >At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 459 Score = 58.4 bits (135), Expect = 5e-09 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +3 Query: 525 DLTEDALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL 698 +LT + LG AG+V E G +++ ++E C N ++VT+ I+G NK + + K ++ D L Sbjct: 267 ELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDAL 326 Query: 699 RAINNAIEDKCVIPGAAAFEI 761 N I +K ++ G A EI Sbjct: 327 CVARNLIRNKSIVYGGGAAEI 347 Score = 40.7 bits (91), Expect = 0.001 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +2 Query: 17 LTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVE 193 L + V AVL + + V+L ++++ +T L+ G+++D HP MPK++E Sbjct: 105 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 164 Query: 194 NAY--ILTCNVSLEYEKTE 244 +A+ ILTC KT+ Sbjct: 165 DAHIAILTCPFEPPKPKTK 183 >At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 58.4 bits (135), Expect = 5e-09 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%) Frame = +3 Query: 525 DLTEDALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL 698 +LT + LG AG+V E G +++ ++E C N ++VT+ I+G NK + + K ++ D L Sbjct: 343 ELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDAL 402 Query: 699 RAINNAIEDKCVIPGAAAFEI 761 N I +K ++ G A EI Sbjct: 403 CVARNLIRNKSIVYGGGAAEI 423 Score = 40.7 bits (91), Expect = 0.001 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%) Frame = +2 Query: 17 LTDACVDAVLTIRT-PGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVE 193 L + V AVL + + V+L ++++ +T L+ G+++D HP MPK++E Sbjct: 181 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 240 Query: 194 NAY--ILTCNVSLEYEKTE 244 +A+ ILTC KT+ Sbjct: 241 DAHIAILTCPFEPPKPKTK 259 >At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-PROT:P50991- T-complex protein 1, delta subunit (TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 536 Score = 47.2 bits (107), Expect = 1e-05 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%) Frame = +2 Query: 14 VLTDACVDAVLTIRTPGKP--VDLHMVEIMEMKHKTATETVLVKGLVMDHG-ARHPDMPK 184 +L VDAVL++ P KP VDL ++I++ T +T VKGLV D +R P Sbjct: 178 LLAPLAVDAVLSVIDPEKPEIVDLRDIKIVKKLGGTVDDTHTVKGLVFDKKVSRAAGGPT 237 Query: 185 RVENAYILTCNVSLEYEKTEVNSA 256 RVENA I + KT++ + Sbjct: 238 RVENAKIAVIQFQISPPKTDIEQS 261 >At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-PROT:P78371- T-complex protein 1, beta subunit (TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 527 Score = 45.2 bits (102), Expect = 5e-05 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Frame = +3 Query: 495 VRGVRVNSVDDLTEDA-LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQ 671 V G + S D E LG L+ E ++GEDK C+ Q+ +I+++G + H L + Sbjct: 321 VTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGCEMGQACSIVLRGASHHVLDE 380 Query: 672 IKDAVRDGLRAINNAIEDKCVIPGAAAFEIKLTR 773 + ++ D L ++ + D V+ G E+ + + Sbjct: 381 AERSLHDALCVLSQTVNDTRVLLGGGWPEMVMAK 414 Score = 34.3 bits (75), Expect = 0.094 Identities = 20/78 (25%), Positives = 41/78 (52%) Frame = +2 Query: 23 DACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHPDMPKRVENAY 202 + VDAV ++ +L ++I++ + ++ L +G ++D PKR+ENA Sbjct: 176 EMAVDAVFRLKGS---TNLEAIQIIKKPGGSLKDSFLDEGFILDKKIGI-GQPKRIENAN 231 Query: 203 ILTCNVSLEYEKTEVNSA 256 IL N +++ +K ++ A Sbjct: 232 ILVANTAMDTDKVKIYGA 249 Score = 27.9 bits (59), Expect = 8.2 Identities = 20/75 (26%), Positives = 36/75 (48%) Frame = +1 Query: 286 KLVAAEREFIDQRVRKIVALKKKLCDGTDKTFVVINQKGIDPLSLDAFAKEGIIGLRRAK 465 ++ AE+E + +V+KI+ G + +N++ I + FA GI+ + A Sbjct: 261 EIEGAEKEKMKDKVKKIIG------HGIN---CFVNRQLIYNFPEELFADAGILAIEHAD 311 Query: 466 RRNMERLALACGGSV 510 +ERL L GG + Sbjct: 312 FEGIERLGLVTGGEI 326 >At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-PROT:P42932- T-complex protein 1, theta subunit (TCP-1-theta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 549 Score = 37.9 bits (84), Expect = 0.008 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = +3 Query: 543 LGFAGLVYEHVLGEDKFTFVEQCKNPQSV-TILIKGPNKHTLTQIKDAVRDGLRAINNAI 719 LG+ + +G T + S+ T++++G L ++ AV DG+ Sbjct: 347 LGYVDSISVEEIGGVTVTIARNEEGGNSISTVVLRGSTDSILDDLERAVDDGVNTYKAMC 406 Query: 720 EDKCVIPGAAAFEIKLTR 773 D ++PGAAA EI+L + Sbjct: 407 RDSRIVPGAAATEIELAQ 424 >At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase family protein similar to SP|Q9Z1T6 FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60 chaperonin family Length = 1791 Score = 32.7 bits (71), Expect = 0.29 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +3 Query: 597 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL-RAINNAIEDKCVIPGAAAFEIKL 767 + E C P TIL++G N+ L ++K V+ G+ A + A+E + A+ E+ L Sbjct: 608 YFEHCPKPLGFTILLRGANEDELKKVKHVVQYGVFAAYHLALETSFLADEGASPELPL 665 >At5g19790.1 68418.m02352 AP2 domain-containing protein RAP2.11 (RAP2.11) identical to AP2 domain containing protein RAP2.11 GI:2281647 from [Arabidopsis thaliana] ;contains Pfam profile: PF00847 AP2-domain Length = 253 Score = 31.9 bits (69), Expect = 0.50 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -2 Query: 631 VTDCGFLHCSTKVNLSSPSTCS*TRPAKPKASSVRSSTELTRTPRTLGLDVPY 473 +TDC + ST +L++ +T + T A P + R + + P T GL +PY Sbjct: 115 LTDCNINYISTATSLTTTTTTT-TTTAIPLNNVYRPDSSVIGQPETEGLQLPY 166 >At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase family protein similar to SP|Q9Z1T6 FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68) (1- phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam profiles PF01504: Phosphatidylinositol-4-phosphate 5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60 chaperonin family Length = 1756 Score = 30.3 bits (65), Expect = 1.5 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +3 Query: 597 FVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL-RAINNAIEDKCVI-PGAAAFEIKL 767 F + C P TIL+KG ++ L ++K ++ G+ A + A+E + GA+ E+ L Sbjct: 595 FFDGCPKPLGCTILLKGAHEDELKKVKHVIQYGVFAAYHLALETSFLADEGASIHELPL 653 Score = 29.5 bits (63), Expect = 2.7 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +2 Query: 119 TETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSASS 262 +E+++VKG+V H M ++E +L +LEY++ N SS Sbjct: 438 SESMVVKGVVCKKNVAHRRMTSKIEKPRLLILGGALEYQRIS-NQLSS 484 >At1g48570.1 68414.m05431 zinc finger (Ran-binding) family protein contains Pfam domain, PF00641: Zn-finger in Ran binding protein and others Length = 455 Score = 29.9 bits (64), Expect = 2.0 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -1 Query: 497 HARARRSILRLFAL-RSPIIPSLAKASSDKGSIP 399 H ARR +L L P+IP+L K SS + S+P Sbjct: 206 HESARRLLLELVEFSEKPLIPALPKPSSKESSLP 239 >At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase family protein low similarity to phosphatidylinositol 3,5-kinase [Candida albicans] GI:14571648; contains Pfam profile PF01504: Phosphatidylinositol-4-phosphate 5-Kinase Length = 1648 Score = 28.7 bits (61), Expect = 4.7 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = +2 Query: 122 ETVLVKGLVMDHGARHPDMPKRVENAYILTCNVSLEYEKTEVNSAS 259 E++L++G+V H M + +N ++ SLEY++ AS Sbjct: 396 ESILIRGIVCSKNITHKRMISQYKNPRVMLLAGSLEYQRVAGQLAS 441 >At5g54330.1 68418.m06766 hypothetical protein contains Pfam profile PF03478: Protein of unknown function (DUF295) Length = 356 Score = 28.3 bits (60), Expect = 6.2 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -1 Query: 755 EGRSTGYDAFIFNGVINSAEAVTNCIFDLCQGMLVGSLDEDGNRLW 618 E RSTG + F+ +AE V + ++V LDE GN ++ Sbjct: 241 ESRSTGGEMFLVKWYKRTAEIVNGVAKMGTEALMVFKLDEQGNAVY 286 >At5g22720.1 68418.m02654 F-box family protein contains F-box domain Pfam:PF00646 Length = 422 Score = 27.9 bits (59), Expect = 8.2 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +3 Query: 510 VNSVDDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIK 677 ++ V D+ + FAGL Y E + +FV +C + IKG ++ + ++K Sbjct: 305 ISGVSDMKISSQAFAGLRYWTPKKELRLSFVPRCLLSSLEFVEIKGCSRSNMERVK 360 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,180,091 Number of Sequences: 28952 Number of extensions: 320290 Number of successful extensions: 984 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 982 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1785055200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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