Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00075
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   145   4e-37
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   145   4e-37
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   113   1e-27
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.18 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  145 bits (351), Expect = 4e-37
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = +3

Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
           IFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ N
Sbjct: 25  IFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGN 84

Query: 435 KRALRRLRTACERAKRTLSSSTQARL 512
            RALRRLRT CERAKRTLSS+TQA +
Sbjct: 85  PRALRRLRTQCERAKRTLSSATQASI 110



 Score =  107 bits (258), Expect = 8e-26
 Identities = 51/96 (53%), Positives = 72/96 (75%)
 Frame = +2

Query: 476 KEDLVIVHTSEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 655
           K  L     + IEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ 
Sbjct: 99  KRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSA 158

Query: 656 IHDIVLVGGSTRIPKVQKLLQDFLLMERSSTKSINP 763
           +H+IVLVGGSTRIPKVQ+L+ ++    +   +SINP
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEY-FNGKEPCRSINP 193



 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +1

Query: 184 INEPTAAAIAYGLDKKGTGERNVL 255
           INEPTAAAIAYGLDKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVL 24


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  145 bits (351), Expect = 4e-37
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = +3

Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
           IFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ N
Sbjct: 25  IFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISGN 84

Query: 435 KRALRRLRTACERAKRTLSSSTQARL 512
            RALRRLRT CERAKRTLSS+TQA +
Sbjct: 85  PRALRRLRTQCERAKRTLSSATQASI 110



 Score =  107 bits (258), Expect = 8e-26
 Identities = 51/96 (53%), Positives = 72/96 (75%)
 Frame = +2

Query: 476 KEDLVIVHTSEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 655
           K  L     + IEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ 
Sbjct: 99  KRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSA 158

Query: 656 IHDIVLVGGSTRIPKVQKLLQDFLLMERSSTKSINP 763
           +H+IVLVGGSTRIPKVQ+L+ ++    +   +SINP
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEY-FNGKEPCRSINP 193



 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +1

Query: 184 INEPTAAAIAYGLDKKGTGERNVL 255
           INEPTAAAIAYGLDKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVL 24


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  113 bits (273), Expect = 1e-27
 Identities = 48/80 (60%), Positives = 70/80 (87%)
 Frame = +3

Query: 255 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATN 434
           ++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD+  +
Sbjct: 24  VYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRAD 83

Query: 435 KRALRRLRTACERAKRTLSS 494
           K+AL++LR   E+AKR LSS
Sbjct: 84  KKALQKLRREVEKAKRDLSS 103



 Score = 98.3 bits (234), Expect = 6e-23
 Identities = 49/98 (50%), Positives = 67/98 (68%)
 Frame = +2

Query: 470 EGKEDLVIVHTSEIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 649
           + K DL  VH + + I++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K
Sbjct: 96  KAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTK 155

Query: 650 AQIHDIVLVGGSTRIPKVQKLLQDFLLMERSSTKSINP 763
            QI +IVLVGGSTRIPK+Q+L++DF    +   + INP
Sbjct: 156 DQIDEIVLVGGSTRIPKIQQLIKDF-FDGKELNRGINP 192



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 184 INEPTAAAIAYGLDKKGTGERNVL 255
           INEPTAAAIAYGLDKKG  E+N+L
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNIL 23



 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 727 FNGKELNKIY*PDE 768
           F+GKELN+   PDE
Sbjct: 181 FDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 659 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 558
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 139 TKDAGTISGLNVLRIINEPTAA 204
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 27  FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 152
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 674 PVQYRGFEPYPSWHHGETSPLAP 606
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 488 VIVHTSEIE-IDSLFEGIDFYTSITRARFEELN 583
           ++V+ +E E +  L + I+ +   T ARF +LN
Sbjct: 464 MLVYQNEAEEVKILLDVINHFPHFTAARFFDLN 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,197
Number of Sequences: 336
Number of extensions: 4620
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)