Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00074
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O97322 Cluster: Putative uncharacterized protein MAL3P7...    34   3.0  
UniRef50_Q1L936 Cluster: Novel protein; n=2; Danio rerio|Rep: No...    33   7.0  
UniRef50_A0EI68 Cluster: Chromosome undetermined scaffold_98, wh...    33   7.0  
UniRef50_Q7RHL5 Cluster: Cation-transporting ATPase; n=5; Plasmo...    33   9.3  

>UniRef50_O97322 Cluster: Putative uncharacterized protein MAL3P7.32;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P7.32 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1334

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -3

Query: 651  YNKYFSLFLTKNKKNTLYFFTNAVIPLQHYRLVPRYRKR 535
            ++KYF LFL+   KN+L+   N ++ + ++ L  RY KR
Sbjct: 1255 FSKYF-LFLSSYNKNSLFITINVILIIAYFSLYIRYNKR 1292


>UniRef50_Q1L936 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 139

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 340 KCYKPNLLVVVFLLCIFSF*LVMYIACLINK*IVFFYIEI*KIVYLYITRYVGSY---YS 510
           +C   NL + +++   F+  L  ++ CL    I++ YI I   +Y+YI  Y+  Y   Y 
Sbjct: 59  QCLNFNLYIYLYVYLHFNDFLFTFLVCLPFSLIIYIYIYIYIYIYIYIYIYIYIYIYIYI 118

Query: 511 VLFEKTYN 534
            ++   YN
Sbjct: 119 YIYIYIYN 126


>UniRef50_A0EI68 Cluster: Chromosome undetermined scaffold_98, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_98,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1270

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 690 IHIQSTFPKLKNPYNKYFSLFLTKNKKNTLYFFTNAVIPLQHYRLVPRYRKRVVSFL 520
           I+I      L+ PYN Y +L +    KNT+Y +     P Q YR   R+++    FL
Sbjct: 478 INITKQAQSLQVPYNIYETLIIGLGDKNTVYLYQIYSNPFQEYREY-RFKQHFSQFL 533


>UniRef50_Q7RHL5 Cluster: Cation-transporting ATPase; n=5;
            Plasmodium|Rep: Cation-transporting ATPase - Plasmodium
            yoelii yoelii
          Length = 1467

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 108  EKYW*YQMIPHFNSISNIF-GNCTLLMRKGDMYFCTVKFTYNDLGSS 245
            +K+W Y +IPH      IF   C LL     +Y CT  +T ND+ +S
Sbjct: 1197 KKWWLYGIIPH-----TIFEAICVLLSLAFSLYICTGSYTLNDIHNS 1238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,749,063
Number of Sequences: 1657284
Number of extensions: 12396931
Number of successful extensions: 27293
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27279
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)