Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00074
(716 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 25 0.46
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.46
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.46
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.81
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.81
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.81
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.81
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.81
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.5
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 22 4.3
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 7.6
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 25.4 bits (53), Expect = 0.46
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 14 IKLCINFVNSSQNIGKQKKKLKLNYALTIFMRKILVI 124
IKL IN + S N K K +Y LT+ L +
Sbjct: 136 IKLSINIILSDPNTNKLKLNTNESYELTVLKSDSLAV 172
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.46
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 239 QFIINSRTFAHLCQLSCYKIKLIYCICVPSL*IVNVISQIY 361
+FII + H + +C K +IY + VPS+ ++ VI ++
Sbjct: 987 EFIIAA--LLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVF 1025
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.46
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 239 QFIINSRTFAHLCQLSCYKIKLIYCICVPSL*IVNVISQIY 361
+FII + H + +C K +IY + VPS+ ++ VI ++
Sbjct: 987 EFIIAA--LLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVF 1025
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 630 FLTKNKKNTLYFFTNAVIP 574
F K ++ TLY+F N ++P
Sbjct: 203 FTIKIRRRTLYYFFNLIVP 221
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 630 FLTKNKKNTLYFFTNAVIP 574
F K ++ TLY+F N ++P
Sbjct: 203 FTIKIRRRTLYYFFNLIVP 221
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 630 FLTKNKKNTLYFFTNAVIP 574
F K ++ TLY+F N ++P
Sbjct: 203 FTIKIRRRTLYYFFNLIVP 221
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 630 FLTKNKKNTLYFFTNAVIP 574
F K ++ TLY+F N ++P
Sbjct: 203 FTIKIRRRTLYYFFNLIVP 221
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.81
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 630 FLTKNKKNTLYFFTNAVIP 574
F K ++ TLY+F N ++P
Sbjct: 203 FTIKIRRRTLYYFFNLIVP 221
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +3
Query: 357 FISCCF-FIVYLFFLACNVY 413
F+ C + F+V LFFL C Y
Sbjct: 129 FLLCIYYFVVPLFFLLCIYY 148
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 22.2 bits (45), Expect = 4.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 594 KNIGCFFCSLLRIG*NIYCTGSSAWEMWIECVC 692
K I F C + R I +GS W+M C+C
Sbjct: 58 KPIPSFAC-IGRCASYIQVSGSKIWQMERSCMC 89
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 206 LYCEIYL**FGQFIINSRTFAHLCQLSCYKIKLI 307
LY Y + QFI+ + +C L K+K I
Sbjct: 429 LYAVEYFQMYAQFIVGTFNSVFICDLIEQKVKNI 462
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,943
Number of Sequences: 336
Number of extensions: 4004
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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