Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00073
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondria... 73 5e-12
UniRef50_Q6DGL8 Cluster: Zgc:92862; n=5; Euteleostomi|Rep: Zgc:9... 66 3e-10
UniRef50_Q28G28 Cluster: Mitochondrial ribosomal protein S15; n=... 63 4e-09
UniRef50_UPI00015B59E7 Cluster: PREDICTED: similar to 28S riboso... 58 9e-08
UniRef50_Q9NAP9 Cluster: 28S ribosomal protein S15, mitochondria... 56 4e-07
UniRef50_Q4U938 Cluster: 30S ribosomal protein S15, putative; n=... 53 5e-06
UniRef50_Q2JR73 Cluster: 30S ribosomal protein S15; n=18; Bacter... 51 1e-05
UniRef50_Q98RM2 Cluster: Plastidal 30S ribosomal protein S15; n=... 51 2e-05
UniRef50_O66594 Cluster: 30S ribosomal protein S15; n=20; Bacter... 51 2e-05
UniRef50_P82914 Cluster: 28S ribosomal protein S15, mitochondria... 50 2e-05
UniRef50_A7I1V7 Cluster: Ribosomal protein S15; n=1; Campylobact... 49 7e-05
UniRef50_A7AP20 Cluster: 30S ribosomal protein S15; n=1; Babesia... 48 1e-04
UniRef50_Q0I9N9 Cluster: Ribosomal protein S15; n=8; Bacteria|Re... 44 0.002
UniRef50_Q658E3 Cluster: Ribosomal protein S15-like; n=4; Magnol... 44 0.002
UniRef50_Q1NYM5 Cluster: Ribosomal protein S15; n=1; Candidatus ... 43 0.005
UniRef50_Q7VIR3 Cluster: 30S ribosomal protein S15; n=11; Bacter... 42 0.009
UniRef50_Q6KHH5 Cluster: 30S ribosomal protein S15; n=11; Firmic... 42 0.011
UniRef50_UPI00005851EC Cluster: PREDICTED: hypothetical protein;... 41 0.015
UniRef50_Q54HG8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.015
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 41 0.015
UniRef50_O13602 Cluster: Probable 40S ribosomal protein S28, mit... 41 0.015
UniRef50_P44389 Cluster: 30S ribosomal protein S15; n=110; Bacte... 41 0.015
UniRef50_Q0UR96 Cluster: Putative uncharacterized protein; n=1; ... 40 0.026
UniRef50_Q8I6T8 Cluster: Ribosomal protein S15, mitochondrial, p... 40 0.046
UniRef50_Q9LMQ3 Cluster: F7H2.15 protein; n=2; Arabidopsis thali... 39 0.060
UniRef50_Q97PI9 Cluster: 30S ribosomal protein S15; n=42; Bacter... 39 0.060
UniRef50_Q4AHU9 Cluster: Ribosomal protein S15, bacterial chloro... 39 0.080
UniRef50_P0ADZ6 Cluster: 30S ribosomal protein S15; n=327; Bacte... 38 0.11
UniRef50_Q62IN0 Cluster: 30S ribosomal protein S15; n=32; Proteo... 38 0.11
UniRef50_Q5KKT6 Cluster: Structural constituent of ribosome, put... 38 0.18
UniRef50_Q7M9B0 Cluster: 30S ribosomal protein S15; n=10; Bacter... 38 0.18
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 0.19
UniRef50_Q7NC27 Cluster: 30S ribosomal protein S15; n=6; Bacteri... 37 0.32
UniRef50_A5K7A6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_Q4FNM7 Cluster: 30S ribosomal protein S15; n=4; cellula... 36 0.74
UniRef50_Q9MUK9 Cluster: Chloroplast 30S ribosomal protein S15; ... 36 0.74
UniRef50_Q4Q365 Cluster: Putative uncharacterized protein; n=3; ... 35 0.98
UniRef50_UPI00006CE56B Cluster: hypothetical protein TTHERM_0014... 35 1.3
UniRef50_Q9RXH2 Cluster: 30S ribosomal protein S15; n=2; Deinoco... 34 1.7
UniRef50_Q7VQM1 Cluster: 30S ribosomal protein S15; n=3; Enterob... 34 2.3
UniRef50_UPI00006CB15E Cluster: hypothetical protein TTHERM_0029... 33 3.0
UniRef50_Q5CT95 Cluster: Putative uncharacterized protein; n=3; ... 33 3.0
UniRef50_Q4Z0R3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q9FGD5 Cluster: Emb|CAB16785.1; n=3; Magnoliophyta|Rep:... 33 4.0
UniRef50_Q4YBV8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0
UniRef50_A5KA26 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q8NEH6 Cluster: Meiosis-specific nuclear structural pro... 33 5.2
UniRef50_A7JT67 Cluster: ROK family transcriptional regulator; n... 32 6.9
UniRef50_A7QJS7 Cluster: Chromosome undetermined scaffold_108, w... 32 6.9
UniRef50_A3LWY0 Cluster: Predicted protein; n=1; Pichia stipitis... 32 6.9
UniRef50_A0JM29 Cluster: Putative uncharacterized protein MGC146... 32 9.2
UniRef50_A1ASK1 Cluster: Sensor protein; n=1; Pelobacter propion... 32 9.2
UniRef50_A5KCZ4 Cluster: Tryptophan-rich antigen; n=1; Plasmodiu... 32 9.2
UniRef50_A0DBV2 Cluster: Chromosome undetermined scaffold_45, wh... 32 9.2
>UniRef50_Q8WTC1 Cluster: 28S ribosomal protein S15, mitochondrial
precursor; n=6; Endopterygota|Rep: 28S ribosomal protein
S15, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 280
Score = 72.5 bits (170), Expect = 5e-12
Identities = 36/85 (42%), Positives = 54/85 (63%)
Frame = +1
Query: 256 ESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKN 435
ESVK +F +++ + E+V V+RH D S E K+A++TA IR Q M+K+
Sbjct: 72 ESVKSLFKLSNNASYLTTKFYRDEMVKEVQRHAQDFGSMEAKLAKMTAVIRRYQEHMDKH 131
Query: 436 PRNSKMKRTVQEMIDRRKKLLKYLR 510
PR+ +K ++E+ID+RKK LKYLR
Sbjct: 132 PRDKMIKVRLKELIDKRKKFLKYLR 156
Score = 53.6 bits (123), Expect = 3e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 89 IQSRGLKHQVNIKWVRPEYVPAYKPEKSGDLEGLPPIPENSIADIYALSEEIKDAQNR*K 268
++ K + IKW+RPE + YKPEKSGDL LPP+ + + Y +E+ A K
Sbjct: 16 VREYAFKSDLKIKWMRPEKIACYKPEKSGDLAKLPPLKADELLPEYRDCKELDKADESVK 75
Query: 269 KYF 277
F
Sbjct: 76 SLF 78
>UniRef50_Q6DGL8 Cluster: Zgc:92862; n=5; Euteleostomi|Rep:
Zgc:92862 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 263
Score = 66.5 bits (155), Expect = 3e-10
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +1
Query: 244 QGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNI 423
Q + VKK+ ++ E L +++L+ +V+R + D +S E K+A LTA IR Q
Sbjct: 97 QSVDDVVKKLLTLEFANHSEKLRLKEEQLIAKVQRDENDRSSTEVKVAILTARIRNFQEH 156
Query: 424 MEKNPRNSKMKRTVQEMIDRRKKLLKYLRST 516
+ K+P++ KR + ID+RKKLLK+LR T
Sbjct: 157 LHKHPKDKANKRWMLMTIDKRKKLLKFLRRT 187
>UniRef50_Q28G28 Cluster: Mitochondrial ribosomal protein S15; n=2;
Xenopus tropicalis|Rep: Mitochondrial ribosomal protein
S15 - Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 248
Score = 62.9 bits (146), Expect = 4e-09
Identities = 34/85 (40%), Positives = 53/85 (62%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VK++ S+ Q E + ++LV++VKR +D S E +IA LTA IR + ++K+P+
Sbjct: 93 VKRLLSLEMASQAEKLKIKTQQLVDKVKRDPHDTRSPEVRIAALTAKIRNYREHIQKHPK 152
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KR + ID+RKK+LK LR T
Sbjct: 153 DKSNKRKMLMAIDKRKKMLKNLRLT 177
>UniRef50_UPI00015B59E7 Cluster: PREDICTED: similar to 28S ribosomal
protein S15, mitochondrial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to 28S ribosomal
protein S15, mitochondrial - Nasonia vitripennis
Length = 269
Score = 58.4 bits (135), Expect = 9e-08
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VKK+F++ + ++E L KK VKRH DE S E +IA +TA I +Q
Sbjct: 82 VKKMFTIHYQRRRELVDLQKKRARELVKRHHCDEGSMETRIAVITAEILQLQEHQSIFHN 141
Query: 442 NSKMKRTVQEMIDRRKKLLKYLR 510
N + K ++E+I++RKK LK LR
Sbjct: 142 NKRSKVLLKELIEKRKKWLKKLR 164
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 113 QVNIKWVRPEYVPAYKPEKSGDLE-GLPPIPENSIADIYALSEEIKDAQNR*KKYFLWHI 289
Q+ I WVRP+ VP EKSGDL P N I + + E+ + + KK F H
Sbjct: 32 QLPITWVRPDKVPCISKEKSGDLGIDYNITPVNYIKEFEDI-PELDELDDIVKKMFTIHY 90
Query: 290 LDKKNFTHWSRK 325
++ +K
Sbjct: 91 QRRRELVDLQKK 102
>UniRef50_Q9NAP9 Cluster: 28S ribosomal protein S15, mitochondrial
precursor; n=2; Caenorhabditis|Rep: 28S ribosomal
protein S15, mitochondrial precursor - Caenorhabditis
elegans
Length = 330
Score = 56.4 bits (130), Expect = 4e-07
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 ESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKN 435
ESVKKIFSV +KE K+ L+ V++H DENS E KIA LTA IR ++
Sbjct: 110 ESVKKIFSVEMATRKELSQEWKQSLIKSVRQHSLDENSLEMKIAWLTALIRHWSLLVNDI 169
Query: 436 PRNSKMKRT-----VQEMIDRRKKLLKYLR 510
+ +K K T + +I+ R+K L+ LR
Sbjct: 170 GQETKKKPTWLTHRIWLVINERRKALRILR 199
>UniRef50_Q4U938 Cluster: 30S ribosomal protein S15, putative; n=2;
Theileria|Rep: 30S ribosomal protein S15, putative -
Theileria annulata
Length = 302
Score = 52.8 bits (121), Expect = 5e-06
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +1
Query: 298 KEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMI 477
K F L + EL +KRH++D S E +A LTA I + + ++ N R+ + KR + ++
Sbjct: 172 KYFSKLYEYELKEPMKRHEFDTGSPEVVVAALTAKIDYLTHHLDNNRRDIQAKRQITKLG 231
Query: 478 DRRKKLLKYLRST 516
+R+KLLKYL T
Sbjct: 232 YKRRKLLKYLYRT 244
>UniRef50_Q2JR73 Cluster: 30S ribosomal protein S15; n=18;
Bacteria|Rep: 30S ribosomal protein S15 - Synechococcus
sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 91
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K+E++ + H D SAE ++A LT+ I + ++KNP++ +R + MI RRK+LL
Sbjct: 8 KQEIIETYRLHDTDTGSAEVQVALLTSRINQLSQHLQKNPKDFNSRRGLMMMIGRRKRLL 67
Query: 499 KYL 507
Y+
Sbjct: 68 NYI 70
>UniRef50_Q98RM2 Cluster: Plastidal 30S ribosomal protein S15; n=1;
Guillardia theta|Rep: Plastidal 30S ribosomal protein
S15 - Guillardia theta (Cryptomonas phi)
Length = 126
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +1
Query: 322 KELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLK 501
+E+ N+ K H+ D S E +IA L+A I + ++KNP++ R + M++ RK+LLK
Sbjct: 41 QEIRNKYKIHEKDTGSPEYQIAALSARISYMTEHVKKNPKDFSSTRGLISMVNARKRLLK 100
Query: 502 YLRS 513
YLR+
Sbjct: 101 YLRN 104
>UniRef50_O66594 Cluster: 30S ribosomal protein S15; n=20;
Bacteria|Rep: 30S ribosomal protein S15 - Aquifex
aeolicus
Length = 90
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +1
Query: 316 VKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKL 495
VK +L+ + +RH+ D S E +IA LT I + M+K+ ++ +R + M+++R+KL
Sbjct: 7 VKWDLIRQFQRHEQDTGSPEVQIAILTERINRLTEHMKKHKKDIHSRRGLIAMVNKRRKL 66
Query: 496 LKYLRST 516
L+YLR T
Sbjct: 67 LEYLRET 73
>UniRef50_P82914 Cluster: 28S ribosomal protein S15, mitochondrial
precursor; n=12; Mammalia|Rep: 28S ribosomal protein
S15, mitochondrial precursor - Homo sapiens (Human)
Length = 257
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VK++ S+ +KE + +++ + ++ + D S E +I L+ IR + +EK+ +
Sbjct: 89 VKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRK 148
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KR + ID+RKK+LK LR+T
Sbjct: 149 DKAHKRYLLMSIDQRKKMLKNLRNT 173
>UniRef50_A7I1V7 Cluster: Ribosomal protein S15; n=1; Campylobacter
hominis ATCC BAA-381|Rep: Ribosomal protein S15 -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 90
Score = 48.8 bits (111), Expect = 7e-05
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +1
Query: 310 TLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRK 489
T K ++V + R + D S+E +IA L+A I I M+ NP++ + + +++ +RK
Sbjct: 5 TAQKAQIVAKFARKEKDTGSSEVQIALLSARIDSITEHMQNNPKDFSSRLGLLKLVGQRK 64
Query: 490 KLLKYLRST 516
+L+KYL+ST
Sbjct: 65 RLMKYLKST 73
>UniRef50_A7AP20 Cluster: 30S ribosomal protein S15; n=1; Babesia
bovis|Rep: 30S ribosomal protein S15 - Babesia bovis
Length = 299
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = +1
Query: 277 SVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMK 456
S+ + K F L +KEL + K H++D SA+ ++A LTA + + ++NP++ + +
Sbjct: 156 SLIRVRGKYFSRLYEKELRDPFKMHEHDTGSAQVQVASLTAKLDYLSLHFKRNPKDIQAR 215
Query: 457 RTVQEMIDRRKKLLKYLRST 516
+ + +RR++LL YL T
Sbjct: 216 LQILRLGNRRRRLLGYLYRT 235
>UniRef50_Q0I9N9 Cluster: Ribosomal protein S15; n=8; Bacteria|Rep:
Ribosomal protein S15 - Synechococcus sp. (strain
CC9311)
Length = 89
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 310 TLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRK 489
T K++L+N + H D SAE ++A L+ I + + +++N + ++ + +MI RRK
Sbjct: 5 TTEKQQLINSHQTHATDTGSAEVQVAMLSERISKLSSHLQQNIHDYSSRQGLLKMIGRRK 64
Query: 490 KLLKYLR 510
+LL Y+R
Sbjct: 65 RLLGYVR 71
>UniRef50_Q658E3 Cluster: Ribosomal protein S15-like; n=4;
Magnoliophyta|Rep: Ribosomal protein S15-like - Oryza
sativa subsp. japonica (Rice)
Length = 431
Score = 44.0 bits (99), Expect = 0.002
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 343 KRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLRST 516
K + D SA ++A+LT I+ + + K ++S+ + +QEM+ RRKK LKYLR T
Sbjct: 329 KMSENDCGSARVQVAQLTTKIKHLSTTLHKKDKHSR--KGLQEMVQRRKKYLKYLRRT 384
>UniRef50_Q1NYM5 Cluster: Ribosomal protein S15; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep:
Ribosomal protein S15 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 78
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
KK ++ +YD + +IA LT I+ I N ++ N ++ +R++Q ++ +RKKLL
Sbjct: 8 KKLIIKNYGLSEYDTGNCIVQIALLTFKIKNITNHLKYNKKDFNTERSLQILVSKRKKLL 67
Query: 499 KYL 507
KY+
Sbjct: 68 KYI 70
>UniRef50_Q7VIR3 Cluster: 30S ribosomal protein S15; n=11;
Bacteria|Rep: 30S ribosomal protein S15 - Helicobacter
hepaticus
Length = 90
Score = 41.9 bits (94), Expect = 0.009
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
KKE++ + R D S+E +IA L+ I + ++ NP++ + + +++ +RK LL
Sbjct: 8 KKEIIAKFARDSKDTGSSEVQIALLSQRIADLTEHLKANPKDHSSRLGLLKLVGQRKSLL 67
Query: 499 KYLRST 516
YL+ T
Sbjct: 68 SYLKKT 73
>UniRef50_Q6KHH5 Cluster: 30S ribosomal protein S15; n=11;
Firmicutes|Rep: 30S ribosomal protein S15 - Mycoplasma
mobile
Length = 88
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K EL+ +++ D S E +IA LT I ++ EKN ++ +R I+ RKKLL
Sbjct: 7 KLELIKSFGKNEKDSGSIEAQIAILTEDIESLKLHFEKNKKDLHSRRGFIAKINHRKKLL 66
Query: 499 KYLR 510
YLR
Sbjct: 67 AYLR 70
>UniRef50_UPI00005851EC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 159
Score = 41.1 bits (92), Expect = 0.015
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +1
Query: 379 KIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLR 510
KIA +T +IR + +E N ++S K + IDRR+K+LKYLR
Sbjct: 23 KIATITEHIRALAPHVENNKKDSVNKVRMLNAIDRRRKMLKYLR 66
>UniRef50_Q54HG8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 607
Score = 41.1 bits (92), Expect = 0.015
Identities = 25/84 (29%), Positives = 43/84 (51%)
Frame = +1
Query: 265 KKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRN 444
K+ S A+ Q E + K+ V + + D SA +IA LT I + +EKN ++
Sbjct: 505 KEFLSFANATQPEVNAYRKQLCVEKYGQSFQDTGSASVQIAILTDRINYLNAHLEKNKKD 564
Query: 445 SKMKRTVQEMIDRRKKLLKYLRST 516
K+ + E+ +R+ L+ YL+ T
Sbjct: 565 FVAKKRIPEVEKKRRSLVAYLKRT 588
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 41.1 bits (92), Expect = 0.015
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Frame = +1
Query: 235 RRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDEN---------SAENKIA 387
+ ++ E++++I SVA+ K+ L ++ + RH+ D S E ++A
Sbjct: 151 QEHRNAQEAIRRIVSVANGNTKDHMRLHIQKCIETFGRHKTDSKTPRVGPDTGSPEVQVA 210
Query: 388 RLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLR 510
LTA I + ++ ++ KR ++ ++ +R+KLL+YLR
Sbjct: 211 ILTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLR 251
>UniRef50_O13602 Cluster: Probable 40S ribosomal protein S28,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Probable 40S ribosomal protein S28,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 288
Score = 41.1 bits (92), Expect = 0.015
Identities = 22/85 (25%), Positives = 45/85 (52%)
Frame = +1
Query: 256 ESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKN 435
ES+ +IF++ + K K+ V R++ D S E + A T+ I + + + +
Sbjct: 177 ESIHRIFNIENSNSKTLRLNNKQLAVESFARNERDTGSPEVQAAVYTSRILALSDHCKNH 236
Query: 436 PRNSKMKRTVQEMIDRRKKLLKYLR 510
++ KR ++ + +R+++LKYLR
Sbjct: 237 KKDQTGKRMLRYYVHQRQRMLKYLR 261
>UniRef50_P44389 Cluster: 30S ribosomal protein S15; n=110;
Bacteria|Rep: 30S ribosomal protein S15 - Haemophilus
influenzae
Length = 89
Score = 41.1 bits (92), Expect = 0.015
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K +V R D S+E +IA LTA I +Q ++ ++ +R + M+ RR+KLL
Sbjct: 8 KAAIVAEFGRDAKDTGSSEVQIALLTAQINHLQTHFAEHKKDHHGRRGLLRMVSRRRKLL 67
Query: 499 KYLRST 516
YL+ T
Sbjct: 68 DYLKRT 73
>UniRef50_Q0UR96 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 332
Score = 40.3 bits (90), Expect = 0.026
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 343 KRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKM-KRTVQEMIDRRKKLLKYLR 510
KR D S+E +IA LTA I+ + + + +N K KR ++ ++ RR+KLL+YLR
Sbjct: 247 KRIGPDTGSSEVQIAILTAKIKTMADFLATRGKNDKHNKRNLRVLVHRRQKLLQYLR 303
>UniRef50_Q8I6T8 Cluster: Ribosomal protein S15, mitochondrial,
putative; n=6; Plasmodium|Rep: Ribosomal protein S15,
mitochondrial, putative - Plasmodium falciparum (isolate
3D7)
Length = 303
Score = 39.5 bits (88), Expect = 0.046
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +1
Query: 271 IFSVAHLG---QKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
I ++ HL K+ H K + ++R +D SA +I LT I ++ + + +
Sbjct: 92 IINMLHLNCGNSKQIHKYKKLNIRRLLQRRPFDVGSAPVQIGCLTEKILNLRAHIIQRCK 151
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KRT+ ++ RR+KL+KYL T
Sbjct: 152 DHSKKRTMSILLARRQKLMKYLYKT 176
>UniRef50_Q9LMQ3 Cluster: F7H2.15 protein; n=2; Arabidopsis
thaliana|Rep: F7H2.15 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 419
Score = 39.1 bits (87), Expect = 0.060
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +1
Query: 343 KRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLRST 516
K + D SA ++A+LT I+ + + + K ++S+ + + M+ +RKKLLKYLR T
Sbjct: 342 KMSESDCGSARVQVAQLTTKIKHLSSSLHKKDKHSR--KGLLGMVQKRKKLLKYLRRT 397
>UniRef50_Q97PI9 Cluster: 30S ribosomal protein S15; n=42;
Bacteria|Rep: 30S ribosomal protein S15 - Streptococcus
pneumoniae
Length = 89
Score = 39.1 bits (87), Expect = 0.060
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K E++ + RH+ D S E ++A LT I + ++++ ++ R + + I RR+ LL
Sbjct: 8 KNEIIAQYARHEGDTGSVEVQVAVLTWEINHLNEHIKQHKKDHATYRGLMKKIGRRRNLL 67
Query: 499 KYLR 510
YLR
Sbjct: 68 AYLR 71
>UniRef50_Q4AHU9 Cluster: Ribosomal protein S15, bacterial
chloroplast and mitochondrial type; n=10; Bacteria|Rep:
Ribosomal protein S15, bacterial chloroplast and
mitochondrial type - Chlorobium phaeobacteroides BS1
Length = 89
Score = 38.7 bits (86), Expect = 0.080
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
KKE+ + + D SAE ++A T I+ + ++ N ++ +R++ ++ +R+KLL
Sbjct: 8 KKEIFEKYGKSVSDTGSAEGQVALFTYRIKHLTGHLKNNKKDVFTQRSLIRLVGKRRKLL 67
Query: 499 KYLR 510
YL+
Sbjct: 68 DYLK 71
>UniRef50_P0ADZ6 Cluster: 30S ribosomal protein S15; n=327;
Bacteria|Rep: 30S ribosomal protein S15 - Shigella
flexneri
Length = 89
Score = 38.3 bits (85), Expect = 0.11
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 325 ELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKY 504
++V+ R D S E ++A LTA I +Q ++ ++ +R + M+ +R+KLL Y
Sbjct: 10 KIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDY 69
Query: 505 LR 510
L+
Sbjct: 70 LK 71
>UniRef50_Q62IN0 Cluster: 30S ribosomal protein S15; n=32;
Proteobacteria|Rep: 30S ribosomal protein S15 -
Burkholderia mallei (Pseudomonas mallei)
Length = 89
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K E+V + R D S E ++A LTA I + + + ++ +R + M+ RR+KLL
Sbjct: 8 KSEVVAQFARGANDTGSPEVQVALLTARITELTGHFKTHAKDHHSRRGLLRMVSRRRKLL 67
Query: 499 KYLR 510
YL+
Sbjct: 68 DYLK 71
>UniRef50_Q5KKT6 Cluster: Structural constituent of ribosome,
putative; n=1; Filobasidiella neoformans|Rep: Structural
constituent of ribosome, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 269
Score = 37.5 bits (83), Expect = 0.18
Identities = 21/84 (25%), Positives = 45/84 (53%)
Frame = +1
Query: 253 SESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEK 432
SE + +I + + + + L ++ +++ D S+ + A LTA I + + +E+
Sbjct: 155 SEMMMRILDLRNANKNAINVLNRQRVIDEFGAG-VDSGSSAVQAALLTAKIHNLLSHIEE 213
Query: 433 NPRNSKMKRTVQEMIDRRKKLLKY 504
NPR++ KR ++ ++ R + LKY
Sbjct: 214 NPRDTSNKRALRLLVQERARHLKY 237
>UniRef50_Q7M9B0 Cluster: 30S ribosomal protein S15; n=10;
Bacteria|Rep: 30S ribosomal protein S15 - Wolinella
succinogenes
Length = 90
Score = 37.5 bits (83), Expect = 0.18
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +1
Query: 316 VKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKL 495
+K E++++ R + D S E ++A L+ I + ++ N ++ + + +++ +RK L
Sbjct: 7 IKLEIISKFARGEKDTGSPEVQVALLSRRISDLTEHLKVNVKDHASRLGLLKLVAQRKHL 66
Query: 496 LKYLRST 516
LKYL+ T
Sbjct: 67 LKYLKKT 73
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect(2) = 0.19
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 358 DENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLR 510
D S E ++A LTA I + ++ ++ KR ++ ++ +R+KLL+YLR
Sbjct: 227 DTGSPEVQVAILTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLR 277
Score = 21.4 bits (43), Expect(2) = 0.19
Identities = 8/44 (18%), Positives = 23/44 (52%)
Frame = +1
Query: 235 RRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDEN 366
+ ++ E++ +I S+ + + L+ ++ ++ RH D+N
Sbjct: 158 QEHRNAQEAINRIISINNGNTADHTRLLIQKCIDTFGRHNTDKN 201
>UniRef50_Q7NC27 Cluster: 30S ribosomal protein S15; n=6;
Bacteria|Rep: 30S ribosomal protein S15 - Mycoplasma
gallisepticum
Length = 90
Score = 36.7 bits (81), Expect = 0.32
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K E++ + +++ D S ++A LT I+ + + KN ++ KR + + +RK LL
Sbjct: 8 KTEIIKKFQKNDADVGSVFVQVAVLTEEIKLLTEHLLKNKKDFISKRGLYTKVSKRKNLL 67
Query: 499 KYLR 510
YL+
Sbjct: 68 NYLK 71
>UniRef50_A5K7A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 940
Score = 35.9 bits (79), Expect = 0.56
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 229 FKRRNQGCSESVKK-IFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYI 405
+K +N G S+ +KK F + + F L +L N + + Y+ A++ + Y+
Sbjct: 133 YKEQN-GISKKIKKHFFLIRSIIFLSFLWLSLGKLKNMIYKKNYNYVIADDNTLNIRKYL 191
Query: 406 RCIQNI-MEKNPRNSKMKRTVQEMIDRRKKLLKY 504
QN M+K +N +T+ ++++RKK Y
Sbjct: 192 LYSQNAEMQKKNQNKFFNKTIFYLLEKRKKCFNY 225
>UniRef50_Q4FNM7 Cluster: 30S ribosomal protein S15; n=4; cellular
organisms|Rep: 30S ribosomal protein S15 - Pelagibacter
ubique
Length = 82
Score = 35.5 bits (78), Expect = 0.74
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLR 510
+K H+ D S+E +IA LT I + +++ ++ + ++RRKKLL+YL+
Sbjct: 8 LKMHEKDTGSSEVQIALLTGKIETLSAHIKQFKKDKHSSVGLLRAVNRRKKLLEYLK 64
>UniRef50_Q9MUK9 Cluster: Chloroplast 30S ribosomal protein S15;
n=2; Streptophyta|Rep: Chloroplast 30S ribosomal protein
S15 - Mesostigma viride
Length = 90
Score = 35.5 bits (78), Expect = 0.74
Identities = 14/65 (21%), Positives = 38/65 (58%)
Frame = +1
Query: 313 LVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKK 492
++KK+++ H D S + +++ L++ + + + + + +R +++++ +RK+
Sbjct: 1 MLKKKIIKTHANHTNDTGSTQVQVSLLSSRVAQLTKHLNNHKNDYSSQRGLKKLLGQRKR 60
Query: 493 LLKYL 507
LLKYL
Sbjct: 61 LLKYL 65
>UniRef50_Q4Q365 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 324
Score = 35.1 bits (77), Expect = 0.98
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +1
Query: 280 VAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKR 459
+ +G+ L +K ++ K+ Q D +AE+ + A+ RC++ + R ++ R
Sbjct: 248 IREIGKAREACLARKTVLEAKKQEQMD--NAEHIKEEVAAFRRCVEGAAHELERRRRINR 305
Query: 460 TVQEMIDRRKKLLK 501
++++ I RR+ LK
Sbjct: 306 SLEDEIGRRRAALK 319
>UniRef50_UPI00006CE56B Cluster: hypothetical protein
TTHERM_00144930; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00144930 - Tetrahymena
thermophila SB210
Length = 865
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 250 CSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIME 429
C + K + ++ + L KKE++ + KR + E ++ K A +T Y+ QN++
Sbjct: 460 CEFTQKYYYGISEETYQIIQELEKKEIIQK-KREKSLEKISQIK-ALITNYLSQPQNLLV 517
Query: 430 KNPRNSK-MKRTVQEMIDRRKKLLK 501
P N K ++R Q ID++ L K
Sbjct: 518 STPNNKKSLQRNQQTNIDKQNSLNK 542
>UniRef50_Q9RXH2 Cluster: 30S ribosomal protein S15; n=2;
Deinococcus|Rep: 30S ribosomal protein S15 - Deinococcus
radiodurans
Length = 91
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 319 KKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLL 498
K+++++ D S ++A LTA I + ++ N ++ +R +Q M +R++LL
Sbjct: 4 KQQVISDNAAGANDTGSTAVQVALLTARINNLAGHLQTNKKDKAGQRGLQLMNGQRRRLL 63
Query: 499 KYLRST 516
KYL T
Sbjct: 64 KYLERT 69
>UniRef50_Q7VQM1 Cluster: 30S ribosomal protein S15; n=3;
Enterobacteriaceae|Rep: 30S ribosomal protein S15 -
Blochmannia floridanus
Length = 90
Score = 33.9 bits (74), Expect = 2.3
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +1
Query: 373 ENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKLLKYLRST 516
E ++A LT I +++ K+ ++ +R + ++ RR+KLLKYL+ +
Sbjct: 27 EVQVALLTQRINALKSHFNKHKQDHHSRRGLLHIVTRRRKLLKYLKKS 74
>UniRef50_UPI00006CB15E Cluster: hypothetical protein
TTHERM_00298390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00298390 - Tetrahymena
thermophila SB210
Length = 806
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 295 QKEFHTLVKKELVNRVKRHQYDENSAENKIA----RLTAYIRCIQNIMEKNPRNSKMKRT 462
QK+ + +K++ R KR +E + ++KIA R+ Y++ ++N + + + ++
Sbjct: 633 QKQLYEGIKQDYFERFKRVNMNETNEDSKIAFEKKRIATYVKELENQRQLGSSSEQKQQG 692
Query: 463 VQEMIDRRK 489
V ++I R K
Sbjct: 693 VDKLIKREK 701
>UniRef50_Q5CT95 Cluster: Putative uncharacterized protein; n=3;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1241
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 229 FKRRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIR 408
F++ NQ K I+ + + E++ EL N ++ + + ++I L YI+
Sbjct: 429 FQKINQNILIKEKDIYELRK--KLEYYDNKNNELNNEIENIKNENKKFIHQIKELKDYIQ 486
Query: 409 CIQNIMEKNP-RNSKMKRTVQEMIDRRKK 492
+ ++E + +N+K K ++ +IDRRKK
Sbjct: 487 DQEKLIESDKVKNNKEKIEMEIIIDRRKK 515
>UniRef50_Q4Z0R3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 63
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 443 FLGFFSMMFCIQRMYAVNLAILFSAEFSSY*CLFTLFTSSFLTNV*NSFC 294
+L F+ + FCI+++YA+ + LF + Y C F F SF V +C
Sbjct: 11 YLYFYIVFFCIKQIYAIYIFYLFKICLALYNCFF-FFVVSFYPYVNFLYC 59
>UniRef50_Q9FGD5 Cluster: Emb|CAB16785.1; n=3; Magnoliophyta|Rep:
Emb|CAB16785.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 870
Score = 33.1 bits (72), Expect = 4.0
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 26 VVNADLLGIINTMLRRFACSAIQSRGLKHQVNIKWVRPEYVPAYKPEKSGDLEGLPPIPE 205
V D G ++++ S +QS+ K I + PEY P Y + LEGL I +
Sbjct: 361 VFGYDPTGFGCLLIKKSVISCLQSQSGKTSSGIVKITPEY-PLYLSDSMDGLEGLTGIQD 419
Query: 206 NSIA 217
N IA
Sbjct: 420 NGIA 423
>UniRef50_Q4YBV8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 78
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -1
Query: 491 FFLLSIISCTVRFIFEFLGFFSMMFCIQ--RMYAVNLAILFSAEFSSY*CLFTLFTSSFL 318
+F + +I CT ++F F +F++ F + R++ + IL + F CL F +S +
Sbjct: 10 YFYMCVIKCTYNYVFYFSFYFTLSFIVYLFRLHFIFQLILIYSNFMVPVCLDFFFANSIV 69
>UniRef50_A5KA26 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 267
Score = 32.7 bits (71), Expect = 5.2
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 ESVKKIFSVAHLGQ-KEFHTLVK--KELVNRVKRHQYDENSAENKIARLTAYIRCIQNIM 426
E++KKI S+ H+ E+ L+K E+V H S E +I + + I + ++
Sbjct: 38 ENIKKILSINHIDNFDEYLKLIKFKYEMVEIANEHFKKIASHERRILQNSKDI--LVKVL 95
Query: 427 EKNPRNSKMKRTVQEMIDRRKKLLKYLR 510
+KN + +K+K + + + D + +L LR
Sbjct: 96 KKNAKKNKLKISQEYLQDTAQYILNELR 123
>UniRef50_Q8NEH6 Cluster: Meiosis-specific nuclear structural
protein 1; n=20; Euteleostomi|Rep: Meiosis-specific
nuclear structural protein 1 - Homo sapiens (Human)
Length = 495
Score = 32.7 bits (71), Expect = 5.2
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 232 KRRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRC 411
KRRN CSE +K+ + K+ H K VN R+Q +N +N++ R ++R
Sbjct: 4 KRRNLSCSERHQKLVDENYC--KKLHVQALKN-VNSQIRNQMVQNENDNRVQR-KQFLRL 59
Query: 412 IQN 420
+QN
Sbjct: 60 LQN 62
>UniRef50_A7JT67 Cluster: ROK family transcriptional regulator; n=3;
Pasteurellaceae|Rep: ROK family transcriptional
regulator - Mannheimia haemolytica PHL213
Length = 395
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 123 LNGFVLNMCLRTNLKNLVI*KAYHPFLRILSLISML*AKKSRMLRIGKKNIFC 281
LN F+LN TN + L +S+I + A+K + ++G KNIFC
Sbjct: 116 LNDFILNFI--TNFRQLYCVNTSQLLAVSISVIGKINAEKDSITQLGNKNIFC 166
>UniRef50_A7QJS7 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=4; Vitis vinifera|Rep:
Chromosome undetermined scaffold_108, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 63
Score = 32.3 bits (70), Expect = 6.9
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 418 NIMEKNPRNSKMKRTVQEMIDRRKKLLKYLRST 516
++M ++ ++ +Q M+ RRKKLLKYLR T
Sbjct: 9 HVMVFKMQDKHSRKGLQAMVQRRKKLLKYLRRT 41
>UniRef50_A3LWY0 Cluster: Predicted protein; n=1; Pichia stipitis|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 1114
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 322 KELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRRKKL 495
K + N VK Q D+N ENK+ R+T +R I+++ R + I R+K++
Sbjct: 879 KTIKNMVK--QEDKNDFENKVLRITRRVRDENGILQRKVETITDPRLITAYIRRKKQI 934
>UniRef50_A0JM29 Cluster: Putative uncharacterized protein
MGC146065; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC146065 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 1106
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +1
Query: 298 KEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMI 477
+E H ++ K ++ Q +NS E K +L A CIQ + + + ++++ +++
Sbjct: 571 QELHGVLHKLQTELQEKSQLLQNSEEEKCTKLRAQENCIQKLQQTLAQKEQLQQEYMDLL 630
Query: 478 DRRKKLLKY 504
++ L K+
Sbjct: 631 KYQQSLGKH 639
>UniRef50_A1ASK1 Cluster: Sensor protein; n=1; Pelobacter
propionicus DSM 2379|Rep: Sensor protein - Pelobacter
propionicus (strain DSM 2379)
Length = 683
Score = 31.9 bits (69), Expect = 9.2
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 316 VKKELVNRVKRHQYDEN---SAENKIARLTAYIRCIQNIMEKNPRNSKMKRTVQEMIDRR 486
V ELV+ + Y N E + R+T Y+ + ++ E N ++KRT QE+ + +
Sbjct: 357 VSGELVHAASKRYYGLNIYSMTETENERVTGYVISLNDMTELRAMNEELKRTAQELNEAQ 416
Query: 487 K 489
+
Sbjct: 417 R 417
>UniRef50_A5KCZ4 Cluster: Tryptophan-rich antigen; n=1; Plasmodium
vivax|Rep: Tryptophan-rich antigen - Plasmodium vivax
Length = 283
Score = 31.9 bits (69), Expect = 9.2
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +2
Query: 107 KHQVNIKWVRPEYVPAYKPEK----SGDLEGLPPIPENSIADIYALSEEIKDAQN-R*KK 271
KH NI W+R EY+ KP K G L+ I + S+ +Y + + K QN +
Sbjct: 181 KHDENICWLRKEYIEWNKPSKVRNTGGWLKWKERIYKQSLEWLYWVQNKEKIIQNIKCSG 240
Query: 272 YFLWHILDKKNFTHW 316
+ W K F W
Sbjct: 241 WIRWKDDKNKIFNQW 255
>UniRef50_A0DBV2 Cluster: Chromosome undetermined scaffold_45, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_45, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1085
Score = 31.9 bits (69), Expect = 9.2
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +1
Query: 229 FKRRNQGCSESVKKIFSV--AHLGQKEFHTLVKKELVNRVKRHQYDENSAENKI-ARLTA 399
F R+ C S + S+ A+LG + KKE+ K +++E+ EN+I +
Sbjct: 926 FFRKAASCFSSKISLLSLQPAYLGFFLCISYYKKEIKKYSKTDKFNEDREENQINQEIDD 985
Query: 400 YIRCIQNIMEKNPRNSKMKRTVQEM 474
+ I + +KN R +KR VQ++
Sbjct: 986 VKQMINKVDKKNARLEDLKRLVQKL 1010
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,352,120
Number of Sequences: 1657284
Number of extensions: 9474687
Number of successful extensions: 26587
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 25797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26578
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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