Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00073
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031336-1|AAH31336.1| 257|Homo sapiens mitochondrial ribosomal... 50 4e-06
AF265439-1|AAG44697.1| 283|Homo sapiens DC37 protein. 50 4e-06
AB049946-1|BAB40999.1| 257|Homo sapiens mitochondrial ribosomal... 50 4e-06
BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclea... 33 0.80
BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclea... 33 0.80
AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens ... 33 0.80
AF497517-1|AAM94374.1| 894|Homo sapiens adenylate cyclase type ... 31 1.9
BC103824-1|AAI03825.1| 546|Homo sapiens taxilin alpha protein. 30 4.3
BC103823-1|AAI03824.1| 546|Homo sapiens taxilin alpha protein. 30 4.3
BC080578-1|AAH80578.1| 546|Homo sapiens taxilin alpha protein. 30 4.3
AL832637-1|CAD89952.1| 546|Homo sapiens hypothetical protein pr... 30 4.3
AL832636-1|CAD89951.1| 546|Homo sapiens hypothetical protein pr... 30 4.3
AL049795-2|CAI22055.1| 546|Homo sapiens novel protein protein. 30 4.3
AF516206-1|AAO42465.1| 546|Homo sapiens taxilin protein. 30 4.3
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 29 9.9
>BC031336-1|AAH31336.1| 257|Homo sapiens mitochondrial ribosomal
protein S15 protein.
Length = 257
Score = 50.4 bits (115), Expect = 4e-06
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VK++ S+ +KE + +++ + ++ + D S E +I L+ IR + +EK+ +
Sbjct: 89 VKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRK 148
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KR + ID+RKK+LK LR+T
Sbjct: 149 DKAHKRYLLMSIDQRKKMLKNLRNT 173
>AF265439-1|AAG44697.1| 283|Homo sapiens DC37 protein.
Length = 283
Score = 50.4 bits (115), Expect = 4e-06
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VK++ S+ +KE + +++ + ++ + D S E +I L+ IR + +EK+ +
Sbjct: 115 VKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRK 174
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KR + ID+RKK+LK LR+T
Sbjct: 175 DKAHKRYLLMSIDQRKKMLKNLRNT 199
>AB049946-1|BAB40999.1| 257|Homo sapiens mitochondrial ribosomal
protein S15 protein.
Length = 257
Score = 50.4 bits (115), Expect = 4e-06
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 262 VKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNPR 441
VK++ S+ +KE + +++ + ++ + D S E +I L+ IR + +EK+ +
Sbjct: 89 VKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRK 148
Query: 442 NSKMKRTVQEMIDRRKKLLKYLRST 516
+ KR + ID+RKK+LK LR+T
Sbjct: 149 DKAHKRYLLMSIDQRKKMLKNLRNT 173
>BC034991-1|AAH34991.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.80
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 232 KRRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRC 411
KRRN CSE +K+ + K+ H K VN R+Q +N +N++ R ++R
Sbjct: 4 KRRNLSCSERHQKLVDENYC--KKLHVQALKN-VNSQIRNQMVQNENDNRVQR-KQFLRL 59
Query: 412 IQN 420
+QN
Sbjct: 60 LQN 62
>BC031046-1|AAH31046.1| 495|Homo sapiens meiosis-specific nuclear
structural 1 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.80
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 232 KRRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRC 411
KRRN CSE +K+ + K+ H K VN R+Q +N +N++ R ++R
Sbjct: 4 KRRNLSCSERHQKLVDENYC--KKLHVQALKN-VNSQIRNQMVQNENDNRVQR-KQFLRL 59
Query: 412 IQN 420
+QN
Sbjct: 60 LQN 62
>AK002084-1|BAA92077.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ11222 fis, clone PLACE1008177. ).
Length = 495
Score = 32.7 bits (71), Expect = 0.80
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 232 KRRNQGCSESVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRC 411
KRRN CSE +K+ + K+ H K VN R+Q +N +N++ R ++R
Sbjct: 4 KRRNLSCSERHQKLVDENYC--KKLHVQALKN-VNSQIRNQMVQNENDNRVQR-KQFLRL 59
Query: 412 IQN 420
+QN
Sbjct: 60 LQN 62
>AF497517-1|AAM94374.1| 894|Homo sapiens adenylate cyclase type V
protein.
Length = 894
Score = 31.5 bits (68), Expect = 1.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -1
Query: 506 KYFNSFFLLSIISCTVRFIFEFLGFFSMMFCIQRMYAVNLAILFSAEFSSY*CLFTLFTS 327
+YF LLS+++C+V +G +M I+ +Y + + + F + L T
Sbjct: 541 EYFTYSVLLSLLACSVFLQISCIGKLVLMLAIELIYVLIVEVPGVTLFDNADLLVTANAI 600
Query: 326 SFLTNV*NSFCPRCATE 276
F N S CP AT+
Sbjct: 601 DFFNNG-TSQCPEHATK 616
>BC103824-1|AAI03825.1| 546|Homo sapiens taxilin alpha protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>BC103823-1|AAI03824.1| 546|Homo sapiens taxilin alpha protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>BC080578-1|AAH80578.1| 546|Homo sapiens taxilin alpha protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>AL832637-1|CAD89952.1| 546|Homo sapiens hypothetical protein
protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFLVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>AL832636-1|CAD89951.1| 546|Homo sapiens hypothetical protein
protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>AL049795-2|CAI22055.1| 546|Homo sapiens novel protein protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>AF516206-1|AAO42465.1| 546|Homo sapiens taxilin protein.
Length = 546
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 340 VKRHQYDENSAENKIARLTAYIRCIQNIMEK-NPRNSKMKRTVQEMIDRRKKLLK 501
V+R + +E + + + IQ ME+ N RNSK+++ E+ +R KKL++
Sbjct: 260 VQRAREEEEKRKEVTSHFQVTLNDIQLQMEQHNERNSKLRQENMELAERLKKLIE 314
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/66 (22%), Positives = 36/66 (54%)
Frame = +1
Query: 259 SVKKIFSVAHLGQKEFHTLVKKELVNRVKRHQYDENSAENKIARLTAYIRCIQNIMEKNP 438
++KKI ++A ++ ++ +K + + +K Q + EN++A + C N + K+
Sbjct: 2304 TLKKILALAKSVKQNTSSVGQKIIKDDIKSLQCKQKDLENRLASAKQEMECCLNSILKSK 2363
Query: 439 RNSKMK 456
R+++ K
Sbjct: 2364 RSTEKK 2369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,007,139
Number of Sequences: 237096
Number of extensions: 1454578
Number of successful extensions: 3004
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3004
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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