Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00071
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein. 50 3e-06
AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine de... 50 3e-06
AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-P... 50 3e-06
AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-P... 50 3e-06
AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-P... 50 3e-06
BT004504-1|AAO42668.1| 351|Drosophila melanogaster GH02581p pro... 29 6.0
AL022139-3|CAA18092.2| 351|Drosophila melanogaster EG:171D11.4 ... 29 6.0
AL009147-8|CAA15631.2| 351|Drosophila melanogaster EG:171D11.4 ... 29 6.0
AF239214-1|AAF40226.1| 351|Drosophila melanogaster arginase pro... 29 6.0
AF047180-1|AAC03552.1| 199|Drosophila melanogaster putative arg... 29 6.0
AE014298-52|AAF45516.2| 351|Drosophila melanogaster CG18104-PA ... 29 6.0
>U29529-1|AAB49330.1| 186|Drosophila melanogaster guf protein.
Length = 186
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 47 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 217
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 63 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 120
Query: 218 LLDFAEERL 244
LL+FAEE+L
Sbjct: 121 LLEFAEEKL 129
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 253 DCIICVL-KSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 396
D I+ V+ K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 132 DGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 182
>AF038597-1|AAC97538.1| 254|Drosophila melanogaster ornithine
decarboxylase antizyme protein.
Length = 254
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 47 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 217
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 218 LLDFAEERL 244
LL+FAEE+L
Sbjct: 189 LLEFAEEKL 197
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 253 DCIICVL-KSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 396
D I+ V+ K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 200 DGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>AE013599-1406|AAF58570.2| 248|Drosophila melanogaster CG16747-PB,
isoform B protein.
Length = 248
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 47 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 217
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 125 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 182
Query: 218 LLDFAEERL 244
LL+FAEE+L
Sbjct: 183 LLEFAEEKL 191
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 253 DCIICVL-KSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 396
D I+ V+ K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 194 DGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 244
>AE013599-1405|AAF58567.2| 270|Drosophila melanogaster CG16747-PC,
isoform C protein.
Length = 270
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 47 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 217
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 147 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 204
Query: 218 LLDFAEERL 244
LL+FAEE+L
Sbjct: 205 LLEFAEEKL 213
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 253 DCIICVL-KSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 396
D I+ V+ K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 216 DGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 266
>AE013599-1404|AAF58569.2| 254|Drosophila melanogaster CG16747-PA,
isoform A protein.
Length = 254
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/69 (37%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = +2
Query: 47 VVNKILERKDKHPVKIEFKIYLTENTVIRWEAVVH--NNMMYLRVPGVLQ-SGSKDSFML 217
V+ +IL+ PV+I K+++TE+ W +++ NN++Y+ +P L +GSK +F+
Sbjct: 131 VLRQILQHDQ--PVQITIKLHVTEDQYTNWNTILNPVNNLLYVALPKDLPPAGSKQTFIS 188
Query: 218 LLDFAEERL 244
LL+FAEE+L
Sbjct: 189 LLEFAEEKL 197
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +1
Query: 253 DCIICVL-KSRPDRATLLRTFMFMGFQVLAPNSP-LTPQHIN-NPNYIFLH 396
D I+ V+ K +PDRA L+ F+FMGF+ L+ +P P IN N NY FL+
Sbjct: 200 DGIVMVMPKDQPDRARLIEAFLFMGFEPLSRKAPQAPPAAINDNENYYFLY 250
>BT004504-1|AAO42668.1| 351|Drosophila melanogaster GH02581p
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
>AL022139-3|CAA18092.2| 351|Drosophila melanogaster EG:171D11.4
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
>AL009147-8|CAA15631.2| 351|Drosophila melanogaster EG:171D11.4
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
>AF239214-1|AAF40226.1| 351|Drosophila melanogaster arginase
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
>AF047180-1|AAC03552.1| 199|Drosophila melanogaster putative
arginase protein.
Length = 199
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
>AE014298-52|AAF45516.2| 351|Drosophila melanogaster CG18104-PA
protein.
Length = 351
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 222 WISLKSVS-AVRLHHLRFEESSRPRYPAAHLHVHGIP 329
W S K S ++RLH L+ S+ PR P L + G+P
Sbjct: 2 WWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVP 38
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,222,260
Number of Sequences: 53049
Number of extensions: 568376
Number of successful extensions: 1600
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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