Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00071
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.22
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.90
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.90
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.90
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 2.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.8
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 6.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.22
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 435 LLG*ETNKKKQLSHFFHKNNRVFFVGNIRLSTTRSSQALR 554
L G E + L + +NN + F+GN+ RS + LR
Sbjct: 857 LKGFEFERLSHLRELYLQNNLIGFIGNLTFLPLRSLEILR 896
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.90
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 566 LERISKCLT*TSRG*SNVANEKNTIIFVEKM 474
L + SK + SRG SN +N T I EK+
Sbjct: 73 LSKRSKSRSPESRGRSNASNTSKTFILSEKL 103
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = +1
Query: 259 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 399
I+C + S + + F +GF P+ ++ P FL Y
Sbjct: 317 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAVSGPGLAFLVY 363
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 154 VVHNSLPTYNCVLGEINL 101
+V S+PTY C LG+ L
Sbjct: 649 LVATSMPTYICYLGKAYL 666
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 320 MNMKVRSRVARSGRLFKTQ 264
++MK++ V +SGR+ TQ
Sbjct: 353 VSMKIKQNVPQSGRVNNTQ 371
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/47 (23%), Positives = 18/47 (38%)
Frame = +1
Query: 259 IICVLKSRPDRATLLRTFMFMGFQVLAPNSPLTPQHINNPNYIFLHY 399
I+C + S + + F +GF P+ + P FL Y
Sbjct: 370 IVCTVNSCTSMLSGIVIFSVVGFMAHEQQKPVADVAASGPGLAFLVY 416
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -3
Query: 220 EQHEAVLAAGLQDPGHAEVHHVVVHNSL 137
E+H+ VL ++ G+ + NSL
Sbjct: 190 EEHDTVLVVNIEKSGNESKKYATSSNSL 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,474
Number of Sequences: 438
Number of extensions: 3557
Number of successful extensions: 64
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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