Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00070
         (713 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH0838...   104   1e-22
AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA ...   104   1e-22

>AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH08388
           protein.
          Length = 556

 Score =  104 bits (250), Expect = 1e-22
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = +2

Query: 35  HTLLLLYGGEAFVAGGLPVQLLRSHCLAIVLLAINGVTECYSFATMTSSQLNSYNYLMVI 214
           + +LLLYGG  FVAGGLP  LL+ HCLAI LLA+NG++E Y FAT TS  ++ YNYLM I
Sbjct: 378 YPVLLLYGGPDFVAGGLPQSLLQWHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAI 437

Query: 215 FSVSFLVLSYCLT 253
           FSVSFLVLSY LT
Sbjct: 438 FSVSFLVLSYILT 450



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +1

Query: 283 SNCINMFARIMHSIHFIRNKYKDTEYKPLNGLLVGKIFLSTLFIAGFVC 429
           +NCINM +RI++S ++IR++Y+     PL GL  GK+F  TLF+AG VC
Sbjct: 461 ANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAGIVC 509


>AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA
           protein.
          Length = 556

 Score =  104 bits (250), Expect = 1e-22
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = +2

Query: 35  HTLLLLYGGEAFVAGGLPVQLLRSHCLAIVLLAINGVTECYSFATMTSSQLNSYNYLMVI 214
           + +LLLYGG  FVAGGLP  LL+ HCLAI LLA+NG++E Y FAT TS  ++ YNYLM I
Sbjct: 378 YPVLLLYGGPDFVAGGLPQSLLQWHCLAIYLLAVNGISEGYMFATNTSRDIDKYNYLMAI 437

Query: 215 FSVSFLVLSYCLT 253
           FSVSFLVLSY LT
Sbjct: 438 FSVSFLVLSYILT 450



 Score = 59.3 bits (137), Expect = 5e-09
 Identities = 25/49 (51%), Positives = 36/49 (73%)
 Frame = +1

Query: 283 SNCINMFARIMHSIHFIRNKYKDTEYKPLNGLLVGKIFLSTLFIAGFVC 429
           +NCINM +RI++S ++IR++Y+     PL GL  GK+F  TLF+AG VC
Sbjct: 461 ANCINMLSRILYSTYYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAGIVC 509


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,000,400
Number of Sequences: 53049
Number of extensions: 569276
Number of successful extensions: 1102
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)