Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00069
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071574-1|AAL49196.1|  168|Drosophila melanogaster RE63412p pro...    90   3e-18
AE014296-3785|EAA46069.1|  168|Drosophila melanogaster CG40045-P...    90   3e-18
BT001441-1|AAN71196.1|  180|Drosophila melanogaster GH25305p pro...    77   3e-14
AE014297-1752|AAF54982.1|  168|Drosophila melanogaster CG9602-PA...    77   3e-14
AY071319-1|AAL48941.1|  167|Drosophila melanogaster RE34144p pro...    52   6e-07
AE014298-2427|AAF48626.1|  167|Drosophila melanogaster CG4443-PA...    52   6e-07
AJ277746-1|CAB90824.1|  200|Drosophila melanogaster ubiquitin co...    47   3e-05
M64435-1|AAA28309.1|  151|Drosophila melanogaster DHR6 protein.        42   7e-04
M63792-1|AAA28308.1|  151|Drosophila melanogaster DHR6 protein.        42   7e-04
BT003481-1|AAO39484.1|  151|Drosophila melanogaster RE56673p pro...    42   7e-04
AE014297-171|AAF52079.1|  151|Drosophila melanogaster CG2013-PA ...    42   7e-04
BT028772-1|ABI34153.1|  178|Drosophila melanogaster IP01717p pro...    33   0.31 
AF410850-1|AAL02117.1|  178|Drosophila melanogaster E2-C type ub...    33   0.31 
AE014296-2152|AAF49909.1|  178|Drosophila melanogaster CG10682-P...    33   0.31 
BT015283-1|AAT94512.1|  341|Drosophila melanogaster GH23746p pro...    31   1.2  
BT011473-1|AAR99131.1|  319|Drosophila melanogaster RE15288p pro...    31   1.2  
AY051915-1|AAK93339.1|  270|Drosophila melanogaster LD40324p pro...    31   1.2  
AE014296-2544|AAN11776.1|  317|Drosophila melanogaster CG7656-PA...    31   1.2  
AE014296-2543|AAN11777.2|  269|Drosophila melanogaster CG7656-PB...    31   1.2  
AE014296-2542|AAF49611.1|  341|Drosophila melanogaster CG7656-PC...    31   1.2  

>AY071574-1|AAL49196.1|  168|Drosophila melanogaster RE63412p
           protein.
          Length = 168

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQEDC 132
           VISMLADPNDESPANVDAAKEWRE Y++FK+KVARCVRKSQE+C
Sbjct: 124 VISMLADPNDESPANVDAAKEWRESYTDFKRKVARCVRKSQEEC 167



 Score = 55.2 bits (127), Expect = 9e-08
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = +2

Query: 323 KEWRESYSEFKRKVAQCVRKSQEDCS 400
           KEWRESY++FKRKVA+CVRKSQE+CS
Sbjct: 143 KEWRESYTDFKRKVARCVRKSQEECS 168


>AE014296-3785|EAA46069.1|  168|Drosophila melanogaster CG40045-PA
           protein.
          Length = 168

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQEDC 132
           VISMLADPNDESPANVDAAKEWRE Y++FK+KVARCVRKSQE+C
Sbjct: 124 VISMLADPNDESPANVDAAKEWRESYTDFKRKVARCVRKSQEEC 167



 Score = 55.2 bits (127), Expect = 9e-08
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = +2

Query: 323 KEWRESYSEFKRKVAQCVRKSQEDCS 400
           KEWRESY++FKRKVA+CVRKSQE+CS
Sbjct: 143 KEWRESYTDFKRKVARCVRKSQEECS 168


>BT001441-1|AAN71196.1|  180|Drosophila melanogaster GH25305p
           protein.
          Length = 180

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQED 129
           VISML DPNDES ANVDAAKE+RE Y+EFK+KV RCVR+SQE+
Sbjct: 136 VISMLTDPNDESAANVDAAKEYRENYAEFKRKVTRCVRRSQEE 178



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 17/24 (70%), Positives = 23/24 (95%)
 Frame = +2

Query: 323 KEWRESYSEFKRKVAQCVRKSQED 394
           KE+RE+Y+EFKRKV +CVR+SQE+
Sbjct: 155 KEYRENYAEFKRKVTRCVRRSQEE 178


>AE014297-1752|AAF54982.1|  168|Drosophila melanogaster CG9602-PA
           protein.
          Length = 168

 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQED 129
           VISML DPNDES ANVDAAKE+RE Y+EFK+KV RCVR+SQE+
Sbjct: 124 VISMLTDPNDESAANVDAAKEYRENYAEFKRKVTRCVRRSQEE 166



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 17/24 (70%), Positives = 23/24 (95%)
 Frame = +2

Query: 323 KEWRESYSEFKRKVAQCVRKSQED 394
           KE+RE+Y+EFKRKV +CVR+SQE+
Sbjct: 143 KEYRENYAEFKRKVTRCVRRSQEE 166


>AY071319-1|AAL48941.1|  167|Drosophila melanogaster RE34144p
           protein.
          Length = 167

 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           V+SMLA+PNDES ANVDAA  WRE+  EF     R VRK+
Sbjct: 123 VVSMLAEPNDESGANVDAAIMWREQRDEFNAIARRLVRKT 162


>AE014298-2427|AAF48626.1|  167|Drosophila melanogaster CG4443-PA
           protein.
          Length = 167

 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 25/40 (62%), Positives = 29/40 (72%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           V+SMLA+PNDES ANVDAA  WRE+  EF     R VRK+
Sbjct: 123 VVSMLAEPNDESGANVDAAIMWREQRDEFNAIARRLVRKT 162


>AJ277746-1|CAB90824.1|  200|Drosophila melanogaster ubiquitin
           conjugating enzyme protein.
          Length = 200

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAAKEWRERYSEF 87
           V+SMLA+PNDES ANVDAA  WRE+  EF
Sbjct: 123 VVSMLAEPNDESGANVDAAIMWREQRDEF 151


>M64435-1|AAA28309.1|  151|Drosophila melanogaster DHR6 protein.
          Length = 151

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           S+L+DPN  SPAN  AA+ ++E   E++K+V  CV +S
Sbjct: 111 SLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148


>M63792-1|AAA28308.1|  151|Drosophila melanogaster DHR6 protein.
          Length = 151

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           S+L+DPN  SPAN  AA+ ++E   E++K+V  CV +S
Sbjct: 111 SLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148


>BT003481-1|AAO39484.1|  151|Drosophila melanogaster RE56673p
           protein.
          Length = 151

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           S+L+DPN  SPAN  AA+ ++E   E++K+V  CV +S
Sbjct: 111 SLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148


>AE014297-171|AAF52079.1|  151|Drosophila melanogaster CG2013-PA
           protein.
          Length = 151

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 120
           S+L+DPN  SPAN  AA+ ++E   E++K+V  CV +S
Sbjct: 111 SLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148


>BT028772-1|ABI34153.1|  178|Drosophila melanogaster IP01717p
           protein.
          Length = 178

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKK 93
           S+L +PN+ESP N  AA  W ++  E+KK
Sbjct: 139 SLLGEPNNESPLNAQAAMMWNDQ-KEYKK 166


>AF410850-1|AAL02117.1|  178|Drosophila melanogaster E2-C type
           ubiquitin conjugatingenzyme protein.
          Length = 178

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKK 93
           S+L +PN+ESP N  AA  W ++  E+KK
Sbjct: 139 SLLGEPNNESPLNAQAAMMWNDQ-KEYKK 166


>AE014296-2152|AAF49909.1|  178|Drosophila melanogaster CG10682-PA
           protein.
          Length = 178

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 7   SMLADPNDESPANVDAAKEWRERYSEFKK 93
           S+L +PN+ESP N  AA  W ++  E+KK
Sbjct: 139 SLLGEPNNESPLNAQAAMMWNDQ-KEYKK 166


>BT015283-1|AAT94512.1|  341|Drosophila melanogaster GH23746p
           protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 181 VISLLNEPNTFSPANVDASVMYRRWRD 207


>BT011473-1|AAR99131.1|  319|Drosophila melanogaster RE15288p
           protein.
          Length = 319

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 159 VISLLNEPNTFSPANVDASVMYRRWRD 185


>AY051915-1|AAK93339.1|  270|Drosophila melanogaster LD40324p
           protein.
          Length = 270

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 112 VISLLNEPNTFSPANVDASVMYRRWRD 138


>AE014296-2544|AAN11776.1|  317|Drosophila melanogaster CG7656-PA,
           isoform A protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 159 VISLLNEPNTFSPANVDASVMYRRWRD 185


>AE014296-2543|AAN11777.2|  269|Drosophila melanogaster CG7656-PB,
           isoform B protein.
          Length = 269

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 111 VISLLNEPNTFSPANVDASVMYRRWRD 137


>AE014296-2542|AAF49611.1|  341|Drosophila melanogaster CG7656-PC,
           isoform C protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VISMLADPNDESPANVDAA---KEWRE 72
           VIS+L +PN  SPANVDA+   + WR+
Sbjct: 181 VISLLNEPNTFSPANVDASVMYRRWRD 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,093,226
Number of Sequences: 53049
Number of extensions: 702204
Number of successful extensions: 1733
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)