BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00068 (748 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 153 2e-37 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 153 2e-37 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 153 2e-37 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 153 2e-37 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 100 1e-21 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 94 8e-20 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 6e-12 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 3e-11 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 41 0.001 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 41 0.001 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.005 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.007 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.087 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 34 0.12 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 34 0.12 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 33 0.27 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.27 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.27 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.27 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.61 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 31 0.61 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.61 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 31 0.61 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 31 1.1 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 31 1.1 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.5 At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.3 At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.7 At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.7 At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.7 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.7 At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.6 At5g06810.1 68418.m00770 mitochondrial transcription termination... 28 7.6 At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 28 7.6 At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 10.0 At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 10.0 At5g02010.1 68418.m00120 expressed protein contains Pfam profile... 27 10.0 At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 27 10.0 At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 27 10.0 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 153 bits (370), Expect = 2e-37 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132 Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509 TREHALLAFTLGVKQ+I NKMD+ Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157 Score = 138 bits (333), Expect = 5e-33 Identities = 65/72 (90%), Positives = 66/72 (91%) Frame = +1 Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 220 DKLKAERERGIT 255 DKLKAERERGIT Sbjct: 61 DKLKAERERGIT 72 Score = 85.0 bits (201), Expect = 5e-17 Identities = 35/56 (62%), Positives = 45/56 (80%) Frame = +2 Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 676 T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 153 bits (370), Expect = 2e-37 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132 Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509 TREHALLAFTLGVKQ+I NKMD+ Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157 Score = 138 bits (333), Expect = 5e-33 Identities = 65/72 (90%), Positives = 66/72 (91%) Frame = +1 Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 220 DKLKAERERGIT 255 DKLKAERERGIT Sbjct: 61 DKLKAERERGIT 72 Score = 85.0 bits (201), Expect = 5e-17 Identities = 35/56 (62%), Positives = 45/56 (80%) Frame = +2 Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 676 T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 153 bits (370), Expect = 2e-37 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132 Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509 TREHALLAFTLGVKQ+I NKMD+ Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157 Score = 138 bits (333), Expect = 5e-33 Identities = 65/72 (90%), Positives = 66/72 (91%) Frame = +1 Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 220 DKLKAERERGIT 255 DKLKAERERGIT Sbjct: 61 DKLKAERERGIT 72 Score = 85.0 bits (201), Expect = 5e-17 Identities = 35/56 (62%), Positives = 45/56 (80%) Frame = +2 Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 676 T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 153 bits (370), Expect = 2e-37 Identities = 71/85 (83%), Positives = 78/85 (91%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132 Query: 435 TREHALLAFTLGVKQLIVGVNKMDS 509 TREHALLAFTLGVKQ+I NKMD+ Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDA 157 Score = 138 bits (333), Expect = 5e-33 Identities = 65/72 (90%), Positives = 66/72 (91%) Frame = +1 Query: 40 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 219 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 220 DKLKAERERGIT 255 DKLKAERERGIT Sbjct: 61 DKLKAERERGIT 72 Score = 85.0 bits (201), Expect = 5e-17 Identities = 35/56 (62%), Positives = 45/56 (80%) Frame = +2 Query: 509 TEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 676 T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 100 bits (239), Expect = 1e-21 Identities = 46/84 (54%), Positives = 59/84 (70%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 +++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQ Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 226 Query: 435 TREHALLAFTLGVKQLIVGVNKMD 506 TREH LA TLGV +LIV VNKMD Sbjct: 227 TREHVQLAKTLGVSKLIVVVNKMD 250 Score = 70.9 bits (166), Expect = 8e-13 Identities = 30/69 (43%), Positives = 49/69 (71%) Frame = +1 Query: 49 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 228 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 229 KAERERGIT 255 + ER +G T Sbjct: 158 EEERLKGKT 166 Score = 39.1 bits (87), Expect = 0.003 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%) Frame = +2 Query: 521 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 676 +S+ R++EI++++ ++K GYN V F+PISG G NM + + PW+ G Sbjct: 256 WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 94.3 bits (224), Expect = 8e-20 Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 1/96 (1%) Frame = +3 Query: 261 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQT 437 +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQT Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366 Query: 438 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRK 545 REHA + GV+Q+IV +NKMD + + DL K Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIK 402 Score = 85.4 bits (202), Expect = 4e-17 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +1 Query: 55 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 234 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 235 ERERGIT 255 ERERGIT Sbjct: 298 ERERGIT 304 Score = 35.5 bits (78), Expect = 0.038 Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = +2 Query: 521 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWQVERKE 697 YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS W Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY----- 445 Query: 698 GKADGKCLIEALDAI 742 G CL++A+D++ Sbjct: 446 ---QGPCLLDAVDSV 457 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 68.1 bits (159), Expect = 6e-12 Identities = 34/87 (39%), Positives = 52/87 (59%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 434 I+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G Q Sbjct: 130 INTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 182 Query: 435 TREHALLAFTLGVKQLIVGVNKMDSLN 515 T+EH LLA +GV ++V +NK D ++ Sbjct: 183 TKEHILLAKQVGVPDMVVFLNKEDQVD 209 Score = 39.1 bits (87), Expect = 0.003 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 37 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 171 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 65.7 bits (153), Expect = 3e-11 Identities = 32/78 (41%), Positives = 48/78 (61%) Frame = +3 Query: 273 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 452 ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176 Query: 453 LAFTLGVKQLIVGVNKMD 506 LA +GV L+ +NK+D Sbjct: 177 LARQVGVPSLVCFLNKVD 194 Score = 32.7 bits (71), Expect = 0.27 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 46 KEKTHINIVVIGHVDSGKSTTT 111 + K H+N+ IGHVD GK+T T Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/78 (29%), Positives = 39/78 (50%) Frame = +3 Query: 282 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461 T + +V+ +D PGH + M+ G + D A+L++AA QT EH Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177 Query: 462 TLGVKQLIVGVNKMDSLN 515 + +K +I+ NK+D +N Sbjct: 178 MMRLKHIIILQNKIDLIN 195 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/78 (29%), Positives = 39/78 (50%) Frame = +3 Query: 282 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 461 T + +V+ +D PGH + M+ G + D A+L++AA QT EH Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177 Query: 462 TLGVKQLIVGVNKMDSLN 515 + +K +I+ NK+D +N Sbjct: 178 MMRLKHIIILQNKIDLIN 195 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 38.3 bits (85), Expect = 0.005 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%) Frame = +3 Query: 276 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 443 FE SK +V+ +D PGH + M+ G + D A+L++AA QT E Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165 Query: 444 HALLAFTLGVKQLIVGVNKMDSLNHH 521 H + +K +I+ NK+D + + Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQEN 191 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 37.9 bits (84), Expect = 0.007 Identities = 22/76 (28%), Positives = 37/76 (48%) Frame = +3 Query: 294 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 473 +V+ +D PGH + M+ G + D A+LI+AA QT EH + + Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173 Query: 474 KQLIVGVNKMDSLNHH 521 K +I+ NK+D + + Sbjct: 174 KDIIIIQNKIDLIQEN 189 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 34.3 bits (75), Expect = 0.087 Identities = 28/93 (30%), Positives = 42/93 (45%) Frame = +3 Query: 279 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 458 E S Y + +ID PGH DF + S A+L+V A G QT + LA Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183 Query: 459 FTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRK 557 F + ++ +NK+D T P+ K++ K Sbjct: 184 FEANL-TIVPVINKID---QPTADPERVKAQLK 212 Score = 29.1 bits (62), Expect = 3.3 Identities = 29/76 (38%), Positives = 34/76 (44%) Frame = +1 Query: 28 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 207 D K EK N +I H+D GKST L+ G I K G G +Y Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102 Query: 208 AWVLDKLKAERERGIT 255 LDKL +RERGIT Sbjct: 103 ---LDKL--QRERGIT 113 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 33.9 bits (74), Expect = 0.12 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 + + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 33.9 bits (74), Expect = 0.12 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 255 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 + + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 32.7 bits (71), Expect = 0.27 Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 1/124 (0%) Frame = +1 Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243 N +I H+D GKST L+ G + R + K F LD + ERE Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131 Query: 244 RGITSILLSGSSKLASTMLP-SLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVS 420 RGIT L + + P L L+DT S E R +A C L V S+ V Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTP-GHVDFSYEVSRSLAACEGALLVVDASQGVE 190 Query: 421 LRTV 432 +T+ Sbjct: 191 AQTL 194 Score = 30.7 bits (66), Expect = 1.1 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +3 Query: 276 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 +E + + + +ID PGH DF + + + A+L+V A G Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 32.7 bits (71), Expect = 0.27 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 297 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 +T +D PGH F + G + D VL+VAA G Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 32.7 bits (71), Expect = 0.27 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGG 138 NI ++ HVD GK+T HLI GG Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35 Score = 32.7 bits (71), Expect = 0.27 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 401 Y + +ID+PGH DF + T +D A+++V A G Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 32.7 bits (71), Expect = 0.27 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +1 Query: 52 KTHINIVVIGHVDSGKSTTTGHLIYKCG 135 K + NI ++ H+D+GK+TTT ++Y G Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 31.5 bits (68), Expect = 0.61 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446 Y V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 31.1 bits (67), Expect = 0.81 Identities = 22/64 (34%), Positives = 34/64 (53%) Frame = +1 Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243 NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 244 RGIT 255 +GIT Sbjct: 117 KGIT 120 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 31.5 bits (68), Expect = 0.61 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = +3 Query: 303 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482 +ID PGH F G+S D A+L+V + + G+ QT E +L + + Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756 Query: 483 IVGVNKMDSL 512 I+ +NK+D L Sbjct: 757 IIALNKVDRL 766 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 31.5 bits (68), Expect = 0.61 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +3 Query: 291 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 446 Y V IID PGH DF + D A+L++ + G I+ + Q R + Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 31.1 bits (67), Expect = 0.81 Identities = 22/64 (34%), Positives = 34/64 (53%) Frame = +1 Query: 64 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 243 NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 244 RGIT 255 +GIT Sbjct: 117 KGIT 120 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 31.5 bits (68), Expect = 0.61 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +3 Query: 297 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 476 + +ID PGH F G++ D A+L+V + G+ QT E L VK Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610 Query: 477 QLIVGVNKMDSL 512 I+ +NK+D L Sbjct: 611 -FIIALNKVDRL 621 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 30.7 bits (66), Expect = 1.1 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +3 Query: 303 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482 +ID PGH F G+S D A+L+V + G+ QT E +L + + Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DITHGLQP--QTIE-SLNLLRMRNTEF 164 Query: 483 IVGVNKMDSL 512 I+ +NK+D L Sbjct: 165 IIALNKVDRL 174 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 30.7 bits (66), Expect = 1.1 Identities = 23/70 (32%), Positives = 34/70 (48%) Frame = +3 Query: 303 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 482 +ID PGH F G+S D A+L+V + G+ QT E +L + + Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIMHGLEP--QTIE-SLNLLRMRNTEF 823 Query: 483 IVGVNKMDSL 512 IV +NK+D L Sbjct: 824 IVALNKVDRL 833 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 29.5 bits (63), Expect = 2.5 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +3 Query: 285 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 386 ++Y + +ID+PGH DF + D A+++V Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 64 NIVVIGHVDSGKSTTTGHLIYKCG 135 N+ VI HVD GKST T L+ G Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44 >At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase 1 [Arabidopsis thaliana] Swiss-Prot:Q42525 Length = 493 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 641 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 739 ++ T W KG++V EGK CL EA++A Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221 >At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain Length = 747 Score = 28.3 bits (60), Expect = 5.7 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 Query: 577 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 678 DW+ C AHF RR +GAF A G+ Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720 >At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein similar to 1,4-alpha-glucan branching enzyme [Solanum tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum tuberosum} SP|P30924; contains Pfam profiles: PF00128 Alpha amylase catalytic domain, PF02922 Isoamylase N-terminal domain Length = 777 Score = 28.3 bits (60), Expect = 5.7 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +2 Query: 524 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 613 SEP+ FEE K+V ++K+ GYN + VP Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289 >At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain Length = 815 Score = 28.3 bits (60), Expect = 5.7 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Frame = +3 Query: 549 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVKKAKLTEN 716 +R SR + QLL S CP L G TCWS + R D W + Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186 Query: 717 ASLKLSMP 740 A KLSMP Sbjct: 187 A--KLSMP 192 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 28.3 bits (60), Expect = 5.7 Identities = 19/67 (28%), Positives = 29/67 (43%) Frame = +3 Query: 306 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 485 +D PGH F G D A+++VAA G QT E A+ ++ Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608 Query: 486 VGVNKMD 506 + +NK+D Sbjct: 609 IAINKID 615 >At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) Monovalent cation:proton antiporter family 2 (CPA2 family) member, PMID:11500563; related to glutathione-regulated potassium-efflux system protein [Escherichia coli] GP|606284|gb|AAA58147 Length = 568 Score = 27.9 bits (59), Expect = 7.6 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 530 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 640 PRF ++ ++SS ++ Y AAVAF +S W D + Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389 >At5g06810.1 68418.m00770 mitochondrial transcription termination factor-related / mTERF-related contains Pfam profile PF02536: mTERF Length = 1141 Score = 27.9 bits (59), Expect = 7.6 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +1 Query: 115 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITSILLS 270 H + G+D + I K KEA+E+ S++ + K+KA + G + + LS Sbjct: 174 HHVLCYSGVDPKRIGKIFKEAREV--FSYETGVLASKIKAYEDLGFSRLFLS 223 >At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar identical to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis thaliana]; supported by full-length cDNA GI:14517549; identical to cDNA Beta-fructosidase GI:3115854 Length = 648 Score = 27.9 bits (59), Expect = 7.6 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Frame = -3 Query: 536 IWAHCMVVQ*IHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 378 +W H + IH++Y + + G+ TG T L D S TGS DE Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201 >At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) Length = 442 Score = 27.5 bits (58), Expect = 10.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 500 NGFTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 619 N TE + P+ E K E+S++I IG+ V F P S Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100 >At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329: Protein of unknown function (DUF731) Length = 440 Score = 27.5 bits (58), Expect = 10.0 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 500 NGFTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 619 N TE + P+ E K E+S++I IG+ V F P S Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100 >At5g02010.1 68418.m00120 expressed protein contains Pfam profile PF03759: Domain of unknown function (DUF315) Length = 546 Score = 27.5 bits (58), Expect = 10.0 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 392 GSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDVIPR 243 G E+S L+ D + + +IN +I LA E+PES ++ +PR Sbjct: 237 GGLQENSRKQLQHKRDCTNQILKAAMAIN--SITLADMEIPESYLESLPR 284 >At3g05470.1 68416.m00599 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 884 Score = 27.5 bits (58), Expect = 10.0 Identities = 24/85 (28%), Positives = 36/85 (42%) Frame = -3 Query: 389 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDVIPRSRSAFSLSNTQ 210 S D+ S S+ G + +S + S + V +S E +D+ SRS F +S + Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSASGSVNVGSSQRFSEHKLDIPECSRSDFGISVSA 367 Query: 209 AYLKDPLPISWASFSNFSMVRLSIP 135 P P FSN + LS P Sbjct: 368 PPPPPPPPPPLPQFSNKRIHTLSSP 392 >At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha subunit, chloroplast / 60 kDa chaperonin alpha subunit / CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO subunit binding-protein alpha subunit, chloroplast precursor (60 kDa chaperonin alpha subunit, CPN-60 alpha) [Arabidopsis thaliana] Length = 586 Score = 27.5 bits (58), Expect = 10.0 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = -3 Query: 389 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDVIPRSRSAFSLSN 216 ++D+HS +L+ D + D + ++ N+VL F P+ D + +R A L N Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,014,099 Number of Sequences: 28952 Number of extensions: 368482 Number of successful extensions: 1197 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 1132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1190 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1653386488 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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