Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00067
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 117 9e-27
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24) 105 5e-23
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43) 103 2e-22
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-09
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 43 3e-04
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 36 0.036
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 31 1.0
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 1.0
SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 30 1.8
SB_55848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 29 4.1
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26314| Best HMM Match : SURF6 (HMM E-Value=2.8) 28 7.2
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 117 bits (282), Expect = 9e-27
Identities = 54/69 (78%), Positives = 61/69 (88%)
Frame = +1
Query: 553 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 732
N +LQFE AWALTNIASGTS QT VV+AGAVP FL+LL SP ++VC+QAVWALGNI+GD
Sbjct: 69 NHSLQFEAAWALTNIASGTSEQTQAVVNAGAVPFFLKLLNSPRQHVCEQAVWALGNIVGD 128
Query: 733 GPVLRDFVI 759
GPVLRDFVI
Sbjct: 129 GPVLRDFVI 137
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +2
Query: 293 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLS 472
KRE+ +QKRRNVP+ +E D+ DL+ +VM A + ++P QL AVQ RKLLS
Sbjct: 2 KREDCMQKRRNVPLELP---DEKDEKFQRRDLNAIVMEAGS-DDPSVQLGAVQAARKLLS 57
Query: 473 CDKNPPIDELI 505
DKNPPID+LI
Sbjct: 58 KDKNPPIDDLI 68
>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
Length = 163
Score = 105 bits (251), Expect = 5e-23
Identities = 48/69 (69%), Positives = 56/69 (81%)
Frame = +1
Query: 553 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 732
NP LQFE AWALTNIASGTS QT V GAVP+F++LL S H+NV +QAVWALGNI GD
Sbjct: 34 NPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGD 93
Query: 733 GPVLRDFVI 759
GP++R+ VI
Sbjct: 94 GPLMRNTVI 102
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 511 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM-SPHE 684
G +P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+ S
Sbjct: 63 GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALIKPSTSI 120
Query: 685 NVCDQAVWALGNI 723
W L N+
Sbjct: 121 QFLRNVTWTLSNL 133
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 443 AVQQCRKLLSCDKNPPIDELI 505
+VQ RK+LS +K+PPID++I
Sbjct: 13 SVQSVRKMLSKEKSPPIDDVI 33
>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
Length = 215
Score = 103 bits (246), Expect = 2e-22
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +1
Query: 553 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 732
+P LQFE AWALTNIASGTS QT V GAVP+F++LL S H+NV +QAVWALGNI GD
Sbjct: 18 HPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHDNVAEQAVWALGNIAGD 77
Query: 733 GPVLRDFVI 759
GP++R+ VI
Sbjct: 78 GPLMRNTVI 86
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 511 GILPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM-SPHE 684
G +P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+ S
Sbjct: 47 GAVPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALIKPSTSI 104
Query: 685 NVCDQAVWALGNI 723
W L N+
Sbjct: 105 QFLRNVTWTLSNL 117
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 508 SGILPILVQCLSRADNPALQFETAWALTNIASGTSAQ 618
SG++P LV+ L + L E AWA++N+ +GT+ Q
Sbjct: 173 SGVVPKLVELLGYPEVNVL--EAAWAISNVTAGTAQQ 207
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 62.9 bits (146), Expect = 3e-10
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Frame = +2
Query: 206 RMHVFKNAGKDVDEMRSEGMKSQSS*EKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 385
R+ +KN DV EMR + K KREE + KRRNV ++ ++ + L T+D
Sbjct: 689 RIKAYKNKSLDVSEMRRRREEEGVQLRKAKREEQMFKRRNVEVTRTSSTGSELEELLTSD 748
Query: 386 ------LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 505
L + ++ A +++ E QLAA Q+ RK+LS + NPPID++I
Sbjct: 749 YMAEGPLFQDMVQAIISDDVEMQLAATQRFRKILSKEPNPPIDDVI 794
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 52.0 bits (119), Expect(2) = 2e-09
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +1
Query: 550 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 654
D +LQFE AWALTNIASGTS QT VV+AG PV
Sbjct: 760 DGHSLQFEAAWALTNIASGTSEQTQAVVNAGDGPV 794
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 514 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 693
+LP L + D L A+ NI +GT QT V++ GA+ F LL E +
Sbjct: 847 VLPALALLIHHQD---LDTAALRAVGNIVTGTDEQTQVVLNHGALSHFTGLLTHHKEKIK 903
Query: 694 DQAVWALGNI 723
+AVW L NI
Sbjct: 904 KEAVWFLSNI 913
Score = 27.5 bits (58), Expect(2) = 2e-09
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 727 GDGPVLRDFVI 759
GDGPVLRDFVI
Sbjct: 790 GDGPVLRDFVI 800
>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 553 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDQAVWALGNIIGD 732
N LQ E AW +TN+++GT T +V+ A A P + L + ++ DQ WALGN+ GD
Sbjct: 112 NIDLQLEAAWCITNLSAGTHEDTLRVLKA-AAPYLITYLSGQNLSLQDQCAWALGNMSGD 170
Query: 733 GPVLRDFV 756
RD +
Sbjct: 171 SVECRDLL 178
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/84 (34%), Positives = 40/84 (47%)
Frame = +1
Query: 511 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 690
G L LV CL D P ++ AWAL IA + + VV AGAVP+ + + P +
Sbjct: 123 GALDALVICLEEFD-PGVKEAAAWALGYIARHNAELSQAVVDAGAVPLLVLCIQEPELAL 181
Query: 691 CDQAVWALGNIIGDGPVLRDFVIE 762
A AL +I P L V++
Sbjct: 182 KRIASSALSDICKHSPELAQTVVD 205
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +1
Query: 508 SGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHEN 687
+G +P+LV C+ + AL+ + AL++I + VV AGA+ Q++++
Sbjct: 164 AGAVPLLVLCIQEPEL-ALKRIASSALSDICKHSPELAQTVVDAGAIAHLAQMILNTDAK 222
Query: 688 VCDQAVWALGNIIGDGPVLRDFVIE 762
+ Q AL I L + V+E
Sbjct: 223 LKRQVFSALSQIAKHSVDLAEMVVE 247
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/83 (28%), Positives = 35/83 (42%)
Frame = +1
Query: 514 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 693
ILP LV L+ N + A+ L +A ++ VV GA+ + L V
Sbjct: 82 ILPQLVYSLAE-QNRFYKKAAAFVLRAVAKHSAQHAQCVVDCGALDALVICLEEFDPGVK 140
Query: 694 DQAVWALGNIIGDGPVLRDFVIE 762
+ A WALG I L V++
Sbjct: 141 EAAAWALGYIARHNAELSQAVVD 163
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 499 AHSSGILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 678
A G+L V ++ + ++ E+ W L+N+ +G + VVHAG VPV +++L S
Sbjct: 14 AMQGGLLLHAVMACLQSSHRHVRKESLWVLSNLTAGPAESCWAVVHAGLVPVTVKMLASE 73
Query: 679 HENVCDQAVWALGNIIGDGP 738
++ + L NI GP
Sbjct: 74 AFDIKKEVALTLCNISYHGP 93
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +1
Query: 511 GILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 630
G +PI+V+CLS N ++F A L N++SGT + NK+
Sbjct: 1216 GGIPIVVRCLSH-QNDQVRFAAACVLRNLSSGTKSDQNKL 1254
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 347 DEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIALE 514
++EE+ A L+E V+NAA N L+A++ C K + D P +++ ++
Sbjct: 336 EDEELILQFAEYLLEERVLNAATVSN---HLSAIEYCLKYIHKDSAPVFPDVVLIQ 388
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = -2
Query: 501 SSSIGGFLSHESSFLHCCTAANCASGF----SALAAFITSSSRSVVARFLSISSS 349
SSS+ FLS SS T+++ S F S+L+ F+TSS S+++ F+S SSS
Sbjct: 331 SSSLSDFLSLSSSLSDFLTSSSLPSDFLTSSSSLSDFLTSS--SLLSDFISSSSS 383
>SB_6714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +2
Query: 161 ETASTDKMATDQAKNRMHVFKNAGKDVDEMRSEGMKSQSS*EKNKREETLQKRRNVPISY 340
E DK DQ ++ + + K++D+ E M Q +K +EE + + +
Sbjct: 136 EMDKEDKEEMDQEMDKEEMDQEMDKEMDKEDKEEM-DQEEMDKQDKEE-MDQEMDKQDKE 193
Query: 341 STDEEEIDKNLATTDLDELVMNAANAENPE 430
D+EE+DK D+ M+ + EN E
Sbjct: 194 EMDQEEMDKQDKENKEDKEEMDKQDKENKE 223
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 227 AGKDVDEMRSEGMKSQSS*EKNK-REETLQKRRNVPISYSTDEEE-IDKNLATTDLD--- 391
AG+D + RSE +K + +++ R E Q+R +YS++E++ ++ L + D
Sbjct: 481 AGQDPEAQRSEMIKKEEERLRSQLRLENQQRRMRERRAYSSEEDDGEEEGLGDLESDNEG 540
Query: 392 -ELVMNAANAENPEAQLAAVQQCRKLLS 472
E +MNA ++ E + ++LLS
Sbjct: 541 EERLMNAKEGKDSEEESIEEPSRKRLLS 568
>SB_55848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 212 HVFKNAGKDVDEMRSEGMKSQSS*EKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 385
H F+ D DE + + E+ K+ T +K++ ++ S+ ++E D+ L D
Sbjct: 44 HEFETINFDADEEDEDDTSGYHTDERRKKRFTKKKKKKEEVTDSSSDDEDDRALVPDD 101
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 RKTACMCS-RMQAKMSMKCAAKE*SHSRVKKKTKERK 305
R C C+ + Q K + A +E SH+R + T+E K
Sbjct: 2740 RDVTCTCATKKQEKKRLNAATQEMSHARARLSTREEK 2776
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 223 LEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGLT 50
LEH F + + + IC R LD R YT N+ L S+L+ + DG L
Sbjct: 566 LEHSDCAFMVDNEAIYDICRRNLDIERPTYT-----NLNRLISQLVSSITASLRFDGALN 620
Query: 49 SIFTKYST 26
T++ T
Sbjct: 621 VDLTEFQT 628
>SB_26314| Best HMM Match : SURF6 (HMM E-Value=2.8)
Length = 222
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 164 TASTDKMATDQ-AKNRMHVFKNAGKDVDEMRSEGMKSQSS*EKNKREETLQKRRNVPISY 340
+A DK D+ KN KN KD ++ E K+ EKN E+ + ++
Sbjct: 40 SADEDKKNHDEDEKNHDEDEKNHDKD-EKKHDEDEKNHDEDEKNHDEDEKNHDEDEK-NH 97
Query: 341 STDEEEIDKNLATTDLDELVMNAANAENPEA 433
DEE D++ D D+ + E P++
Sbjct: 98 DEDEENHDEDEKNHDEDDKCYDEDRVEEPQS 128
>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 145 NYTKKQRINIKLLSSKLIKHVLRHYTSDGGLTSIFTKYSTTHK 17
NY ++ + ++ L+S+ + + H D LTS Y+ HK
Sbjct: 128 NYAREHKRDVTSLTSQTLHYAREHKRDDTSLTSQTLHYAREHK 170
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 314 KRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCR 460
K N+P + +T +EE L T D E +N N+ + + L A+Q +
Sbjct: 19 KENNLPRTLATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLK 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,458,536
Number of Sequences: 59808
Number of extensions: 527677
Number of successful extensions: 1576
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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