Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00066
(747 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 149 3e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 7e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 146 2e-35
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 133 2e-31
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 90 2e-18
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 3e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.99
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.0
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 29 4.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.3
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 28 7.0
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 28 7.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.2
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 149 bits (360), Expect = 3e-36
Identities = 72/79 (91%), Positives = 76/79 (96%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 688
+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+L
Sbjct: 151 HDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVL 210
Query: 689 TIEDGIFEVKSTAGDTHLG 745
TIEDGIFEVKSTAGDTHLG
Sbjct: 211 TIEDGIFEVKSTAGDTHLG 229
Score = 138 bits (335), Expect = 3e-33
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 425
P+ T+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 426 VLTKMKETAEAYLGKTVQNAVITVPAY 506
VLTKMKETAEAYLG V +AV+TVPAY
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAY 149
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 241 MNP 249
MNP
Sbjct: 61 MNP 63
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 147 bits (357), Expect = 7e-36
Identities = 72/79 (91%), Positives = 74/79 (93%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 688
NDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVL 303
Query: 689 TIEDGIFEVKSTAGDTHLG 745
+IEDGIFEVKST GDTHLG
Sbjct: 304 SIEDGIFEVKSTHGDTHLG 322
Score = 130 bits (314), Expect = 1e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 241 MNP 249
MNP
Sbjct: 61 MNP 63
Score = 114 bits (275), Expect = 6e-26
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV--- 416
P TIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 417 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 506
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +3
Query: 411 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 506
++SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 242
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 509 NDSQRQATKDAG 544
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 146 bits (353), Expect = 2e-35
Identities = 70/80 (87%), Positives = 77/80 (96%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 688
NDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSIL
Sbjct: 151 NDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSIL 210
Query: 689 TIEDG-IFEVKSTAGDTHLG 745
TI+DG +FEVKSTAGDTHLG
Sbjct: 211 TIDDGSLFEVKSTAGDTHLG 230
Score = 140 bits (338), Expect = 1e-33
Identities = 64/87 (73%), Positives = 76/87 (87%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 425
P+ TIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 426 VLTKMKETAEAYLGKTVQNAVITVPAY 506
VL KMKETAEAYLG+ V +AVITVPAY
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAY 149
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 241 MNP 249
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 133 bits (321), Expect = 2e-31
Identities = 61/79 (77%), Positives = 73/79 (92%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSIL 688
ND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+L
Sbjct: 849 NDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLL 907
Query: 689 TIEDGIFEVKSTAGDTHLG 745
TI++G+FEV +T GDTHLG
Sbjct: 908 TIDNGVFEVVATNGDTHLG 926
Score = 118 bits (284), Expect = 5e-27
Identities = 55/87 (63%), Positives = 69/87 (79%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 425
P+ T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 426 VLTKMKETAEAYLGKTVQNAVITVPAY 506
VLTKMKETAEAYLGK V +AV+TVPAY
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAY 847
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 249
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = +2
Query: 518 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 697
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQ 242
Query: 698 DGIFEVKSTAGDTHLG 745
G+F + AG+ LG
Sbjct: 243 GGMFVTMAMAGNNRLG 258
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 241 MNP 249
+NP
Sbjct: 90 INP 92
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 422
P+ TI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 423 MVLTKMKETAEAYLGKTVQNAVITVPAYLMTLKDKPQKMQVPSLA 557
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAE-FDIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 72.1 bits (169), Expect = 4e-13
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 249 QQTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSM 425
+ TI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 426 VLTKMKETAEAYLGKTVQNAVITVPAY 506
+ T++K TAE L V + VI+VP+Y
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY 206
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +2
Query: 512 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVS 682
D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVC 268
Query: 683 ILTIEDGIFEVKSTAGDTHLG 745
I G +V STA + +LG
Sbjct: 269 ITAFLKGQLKVLSTAVEPNLG 289
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 234
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 641 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 745
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +3
Query: 366 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 506
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 52.8 bits (121), Expect = 3e-07
Identities = 38/70 (54%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 616
ND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 617 KK--GTGERN 640
K G ERN
Sbjct: 110 KARGGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 130 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNK---QYSMPNVSSDVSSKM 300
G IIAND G+R TP+ VAF+DTE+LI + N+ Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 301 L 303
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Frame = +2
Query: 509 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFD 676
N ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTV 176
Query: 677 VSIL 688
+I+
Sbjct: 177 ATIV 180
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 360 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 506
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 139 EIIANDQGNRTTPSYVAFT-DTERL 210
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 641 VLIFDLGGGTFDVSILTIEDGIFEVK 718
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 647 IFDLGGGTFDVSILTIEDGIFEV 715
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 590 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 742
A A L +G E + D G GT VS + +E+G +++ D H+
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHI 1555
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 738 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 622
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 247 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 149
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -3
Query: 724 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 557
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 556 ---ARDGTC 539
AR TC
Sbjct: 345 VYNARISTC 353
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 425 GAYENEG-NCRSLSWQNCAECSYHGSRVLNDSQRQAT--KDAGTISGLNVLRIINEPTAA 595
GA +N + SL W C + YHG +V+ + A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 596 AIAYGLDKKGTG 631
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -2
Query: 257 CLLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 78
CLL I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 654 TSAAVPSTCPSLPSRMVSSR*NPPPATP 737
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 7 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 93
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 357 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYLMTLKDKPQK 536
+PK K + E+ EE +M ++K LGK V+ + T +TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 537 MQ 542
Q
Sbjct: 714 SQ 715
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 479 ECSYHGSRVLNDSQRQATKDAG-TISGLNVLRI 574
ECS+ GS+V+N S+R DAG ++G++ RI
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRI 709
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 454 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRP 281
S F+F ST + +S +KV+ SPL + + P+ G S C V + + P
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNVQNLSRCP 1165
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 224
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 225 QEPGGDEPQQTIFDA 269
G +P+ T F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 649 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 563
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,843,094
Number of Sequences: 59808
Number of extensions: 589610
Number of successful extensions: 1988
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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