Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00064
         (760 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54CG7 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q4YUQ7 Cluster: Putative uncharacterized protein; n=3; ...    35   1.9  
UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena pigment...    33   5.8  

>UniRef50_Q54CG7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 768

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -3

Query: 692 NRGKSVQSNLLLLNIHSRLYKVELTILIILNNNTFHSIYCYLF 564
           NR  S+Q++L L+ ++++ YK  LT+LI + N     I  YLF
Sbjct: 402 NRTFSIQNDLPLVKLYTKYYKPPLTLLISVANENHQEILNYLF 444


>UniRef50_Q4YUQ7 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 847

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 533 VSSSNHLSNKKTNNSILNGMYYYLR*SKLSIQLYTVYYV 649
           +   NH  N K +NSILN   Y LR  K   +L+ +YY+
Sbjct: 28  IKLENHQINVKEDNSILNNSVYMLRKQKNEKKLFELYYI 66


>UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena
           pigmentosa|Rep: Heme maturase - Tetrahymena pigmentosa
          Length = 522

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 27/81 (33%), Positives = 40/81 (49%)
 Frame = +2

Query: 257 NIKNNNFSFVLCYF*HSFGCLIEFLLIFMIFHSIIVVCTA*DIKYVYLMSILSNIV*IEY 436
           NI NNN + ++  F       I F+ IF  F  I ++     IKY    +IL+ +V I  
Sbjct: 321 NISNNNLNNIINIFIMYLNNFINFI-IFWFF--IYLLKNVNIIKYNIFSTILNELVIIAN 377

Query: 437 ITFYHRT*YKYY*LHYLVQFL 499
           I + +RT   +  LH +V FL
Sbjct: 378 IYYLYRTIRLFKYLHLIVIFL 398


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,688,045
Number of Sequences: 1657284
Number of extensions: 11433372
Number of successful extensions: 24608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24598
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)