Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00064
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.1  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 86  AHHCCAH*KLPQKCDMVKQNPTIKFDKCSLFS 181
           AH   A+   P+ C++V  NPT   +K ++++
Sbjct: 82  AHLAAANILSPEDCELVLSNPT-HMEKSAIYN 112


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 86  AHHCCAH*KLPQKCDMVKQNPTIKFDKCSLFS 181
           AH   A+   P+ C++V  NPT   +K ++++
Sbjct: 82  AHLAAANILSPEDCELVLSNPT-HMEKSAIYN 112


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 423  FKLSILHFIIELSTNITSYI 482
            F ++ LHF++++   +T+YI
Sbjct: 1420 FHVNKLHFLLQIIGGVTTYI 1439


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 143 NPTIKFDKCS-LFSEQKTD 196
           NPTIK D C+ L+ ++ TD
Sbjct: 183 NPTIKEDFCAVLWKDKSTD 201


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 577 YIEWNVLLFKMIKIV 621
           YIEW V   K++ I+
Sbjct: 52  YIEWGVKFLKVVTII 66


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 577 YIEWNVLLFKMIKIV 621
           YIEW V   K++ I+
Sbjct: 52  YIEWGVKFLKVVTII 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,309
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)