Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00064
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p pro...    30   3.0  
AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid ...    30   3.0  
AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid ...    30   3.0  
AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB...    30   3.0  
AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA...    30   3.0  
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ...    30   3.9  
AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p pro...    29   5.2  
AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA...    29   5.2  

>BT010069-1|AAQ22538.1|  314|Drosophila melanogaster LD13050p
           protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 1   EKFQELQELQYLTNPDLHA-SKDRF 72
           EKFQELQE+Q L   +  A SKDRF
Sbjct: 290 EKFQELQEIQNLNELEYSATSKDRF 314


>AF253528-2|AAF71285.1|  314|Drosophila melanogaster proteolipid
           protein M6-2 protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 1   EKFQELQELQYLTNPDLHA-SKDRF 72
           EKFQELQE+Q L   +  A SKDRF
Sbjct: 290 EKFQELQEIQNLNELEYSATSKDRF 314


>AF253528-1|AAF71284.1|  248|Drosophila melanogaster proteolipid
           protein M6-1 protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 1   EKFQELQELQYLTNPDLHA-SKDRF 72
           EKFQELQE+Q L   +  A SKDRF
Sbjct: 224 EKFQELQEIQNLNELEYSATSKDRF 248


>AE014296-3552|AAN12170.1|  314|Drosophila melanogaster CG7540-PB,
           isoform B protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 1   EKFQELQELQYLTNPDLHA-SKDRF 72
           EKFQELQE+Q L   +  A SKDRF
Sbjct: 290 EKFQELQEIQNLNELEYSATSKDRF 314


>AE014296-3551|AAF51736.1|  314|Drosophila melanogaster CG7540-PA,
           isoform A protein.
          Length = 314

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 1   EKFQELQELQYLTNPDLHA-SKDRF 72
           EKFQELQE+Q L   +  A SKDRF
Sbjct: 290 EKFQELQEIQNLNELEYSATSKDRF 314


>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
            protein.
          Length = 1037

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 728  MDIMFISIDIKKNRGKSVQSNLLLLNIHSRLYKVELTILIILNNNTFHSIYCY 570
            +DI F +   KK     V+   L LN H RLY  +      +  N + +I CY
Sbjct: 877  IDIHFTT-PYKKTGNSDVERLHLTLNEHMRLYNADPNNFDTIQENVYKAIVCY 928


>AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p
           protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 590 FHSIYCYLFFYCLGGWTSSQP 528
           FH +YCYLFF     W  S P
Sbjct: 259 FHKLYCYLFFEFDRFWMESDP 279


>AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA
           protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 590 FHSIYCYLFFYCLGGWTSSQP 528
           FH +YCYLFF     W  S P
Sbjct: 259 FHKLYCYLFFEFDRFWMESDP 279


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,817,633
Number of Sequences: 53049
Number of extensions: 517836
Number of successful extensions: 767
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)