Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00064
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical... 29 4.7
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 28 8.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 8.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.3
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 28 8.3
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 28 8.3
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 28 8.3
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 28 8.3
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 28 8.3
>U70848-1|AAB09107.2| 434|Caenorhabditis elegans Hypothetical
protein C43G2.1 protein.
Length = 434
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -2
Query: 282 KLKLLFFIFTAVICLHFSFPYF---LHIIH**SVFCSLNNEHLSNLIVG 145
K+ FF AV+CL SF + H ++ +FC L+ +S LI+G
Sbjct: 234 KVVFSFFFAGAVLCLGLSFAFHTLSCHSVNVVKIFCKLDYMGISLLIIG 282
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 713 ISIDIKKNRGKSVQSNLLLLNIHSRLYKVELTILIILNNNTFHSI 579
+S+D+K N + S + LN+ +V+L + +I+ +TF ++
Sbjct: 201 VSLDVKLNEKLKLPSENIKLNLMKLANQVQLVMTLIIEKSTFPTL 245
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -3
Query: 713 ISIDIKKNRGKSVQSNLLLLNIHSRLYKVELTILIILNNNTFHSI 579
+S+D+K N + S + LN+ +V+L + +I+ +TF ++
Sbjct: 201 VSLDVKLNEKLKLPSENIKLNLMKLANQVQLVMTLIIEKSTFPTL 245
>AC087081-13|AAK66033.1| 253|Caenorhabditis elegans Hypothetical
protein Y82E9BL.6 protein.
Length = 253
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 686 GKSVQSNLLLLNIHSRLYKVELTILIILNNNTFHSIYCYLFFYCLG 549
G+ + +N L ++ + EL ++II +TF C++ + LG
Sbjct: 5 GRILHANYLRFLVYFIYFTYELNVIIIFKESTFLESTCFIIPFSLG 50
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +1
Query: 580 IEWNVLLFKMIKIVNSTLYSLLCMLSNSRLD*TDFPLFFFMSIEINIISIR 732
I N +FK+I ++N T++ L+C ++ T +F N+I+++
Sbjct: 262 IRKNSSIFKLISLINGTIHFLICFFMSTLYRKTVKEMFGMQPHNGNLINVQ 312
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 695 KNRGKSVQSNLLLLNIHSRLYKVELTILII 606
+++ K++QSNLL +N H + +E T L++
Sbjct: 1362 EDKVKTIQSNLLRVNSHEAMEPIEATNLLL 1391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,494,549
Number of Sequences: 27780
Number of extensions: 299911
Number of successful extensions: 593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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