Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00063
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    26   1.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   1.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.6  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   5.9  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.9  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 688 FSASHRLINPGAPFSVVIGKLSLVVKTW 605
           +SA H++   GAP   ++G LSLVV+ +
Sbjct: 37  WSAIHKMQVRGAPAIAIVGCLSLVVEIY 64


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +3

Query: 420 QRNQREQTSSDVFGHKAEISPEGVHSYFGLDLAISDYFRKQYSPGQAQLTLRYGMNPH 593
           Q+ QR+Q        K E+ P   HS++ L   + D  ++    G A   L+ G   H
Sbjct: 299 QQQQRQQQKVRPRPDKIEVVPSAGHSWYTLYKTVRDAVKQDPHKGLAD-HLKMGKRSH 355


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 409  DVVVKEIKENKHHQTSLGTRQRLALKAFTHTSDLTSPYRTTSASNTRPDK 558
            DV   +I  N +HQ      +R  L+   +T+ ++S YRT  A+ +  D+
Sbjct: 2411 DVQSYKIDANGNHQHFYTGFRRYRLEYVKNTNKISSVYRTNFAARSGLDE 2460


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 409  DVVVKEIKENKHHQTSLGTRQRLALKAFTHTSDLTSPYRTTSASNTRPDK 558
            DV   +I  N +HQ      +R  L+   +T+ ++S YRT  A+ +  D+
Sbjct: 2412 DVQSYKIDANGNHQHFYTGFRRYRLEYVKNTNKISSVYRTNFAARSGLDE 2461


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 651 GAPGFINLCDALNAWQLVKELKEA 722
           G+PGF+ L   LN   LV +LK A
Sbjct: 75  GSPGFVGLYIFLNPVLLVTDLKLA 98


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +1

Query: 52  LPVAVPPRRFGTPASQ-----FKMCRTSREHRRCSEV 147
           L V +PP      A+Q      K CR +++  RCSE+
Sbjct: 163 LSVRLPPEDGAECATQPCSALLKACRYAKQPERCSEI 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,447
Number of Sequences: 2352
Number of extensions: 14858
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)