Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00063
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 102 2e-22
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z81508-3|CAB04144.1| 288|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 31 1.2
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 31 1.2
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 31 1.2
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.8
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical ... 29 3.6
AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical ... 29 3.6
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 28 6.4
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 28 8.4
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 8.4
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 103 bits (246), Expect = 2e-22
Identities = 47/81 (58%), Positives = 62/81 (76%)
Frame = +3
Query: 3 GLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGGRVKTLHPAVHAG 182
GL+ LA L GL LIASGGTA A+R+ G+ V DV+D+T+ PEMLGGRVKTLHPAVH G
Sbjct: 17 GLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPEMLGGRVKTLHPAVHGG 76
Query: 183 ILARLSDSDQEDMKRQKYEMI 245
ILAR ++SD++D+++ +
Sbjct: 77 ILARDTESDRKDLEKHNISFV 97
Score = 102 bits (244), Expect = 3e-22
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Frame = +3
Query: 510 DLAISDYFRKQYSP-GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGAPGFINLCDA 683
D +IS + R++++ G+ L LRYG NPHQK A+++ D +PI LNG+PG+IN+ D
Sbjct: 184 DESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGYINILDG 243
Query: 684 LNAWQLVKELKEALNLPAAASFKHVS 761
LN WQLVKEL +A +PAAASFKHVS
Sbjct: 244 LNGWQLVKELSDATKMPAAASFKHVS 269
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +1
Query: 361 AKNHDRVTVVCDPADYDVVVKEIKENKHHQTSLGTRQRLALKAFTHTS 504
AKNH+RV+V+CDPADYD ++ E+K T+ RQ LALKAF HT+
Sbjct: 137 AKNHERVSVICDPADYDHIISELKSG---GTTRERRQLLALKAFEHTT 181
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2
Query: 254 VCNLYPFVQTVSKPDVTVADAVENIDIGGVTLLRA 358
VCNLYPF +TV D +V +AVENIDIGGVTLLRA
Sbjct: 101 VCNLYPFKKTVQSKDCSVEEAVENIDIGGVTLLRA 135
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 102 bits (245), Expect = 2e-22
Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Frame = +3
Query: 462 HKAEISPEGVHSYFGLDLAISDYFRKQYSP-GQAQLTLRYGMNPHQKP-AQVFTTRDSLP 635
H+ + E SY D +IS + R++++ G+ L LRYG NPHQK A+++ D +P
Sbjct: 41 HRGNKAFEHTTSY---DESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMP 97
Query: 636 ITTLNGAPGFINLCDALNAWQLVKELKEALNLPAAASFKHVS 761
I LNG+PG+IN+ D LN WQLVKEL +A +PAAASFKHVS
Sbjct: 98 IKVLNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVS 139
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +3
Query: 630 LPITTLNGAPGFINLCDALNAWQLVKELKEALNLPAAASFKHVS 761
+PI LNG+PG+IN+ D LN WQLVKEL +A +PAAASFKHVS
Sbjct: 1 MPIKVLNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVS 44
>Z81508-3|CAB04144.1| 288|Caenorhabditis elegans Hypothetical
protein F20E11.5 protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -1
Query: 381 DPVVVLGCARRRVTPPMSMFSTASATVTSGLDTVWTNGYRLQTPRLSSRTSDVSCLPGQS 202
D V++L T S A ++T G D VW + ++ L++ S +CLP Q+
Sbjct: 131 DAVLILETPNDLFTSGTGPGSIAETSITCGDDVVWQDSNGIRGDMLTASISPQTCLPCQT 190
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 764 AGHVLEASRSREVQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGRENLGRFLMWV 585
A H +R +E++ +LL Q + +VD R +QC R + R L W+
Sbjct: 1987 ARHRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWI 2046
Query: 584 H 582
H
Sbjct: 2047 H 2047
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 764 AGHVLEASRSREVQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGRENLGRFLMWV 585
A H +R +E++ +LL Q + +VD R +QC R + R L W+
Sbjct: 2025 ARHRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWI 2084
Query: 584 H 582
H
Sbjct: 2085 H 2085
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 764 AGHVLEASRSREVQRFLQLLDELPGVQRVAQVDKSRRTVQCRDRQAVSGRENLGRFLMWV 585
A H +R +E++ +LL Q + +VD R +QC R + R L W+
Sbjct: 1987 ARHRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLETPDSDISQRLLQWI 2046
Query: 584 H 582
H
Sbjct: 2047 H 2047
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 321 STASATVTSGLDTVWTNGYRLQTPRLSSRTSDVSCLPGQS 202
+ A A+VT G D VW + ++ L + + SCLP Q+
Sbjct: 69 NVAEASVTCGNDAVWVDSRGIRGNTLITSIAPQSCLPCQT 108
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 56 QWRYRHGASERRPHSSRCVGHHESTGDARRSGENFTSSGTR---WYLSSIIGL*PGRHET 226
++R RHG E P R HH G+ + EN + ++ + + G+ P +
Sbjct: 213 KYRPRHGEEEEEPSRER--EHHHHRGEEKPETENIAETPSKVVGLNMQMVAGVYPKEKKG 270
Query: 227 SEVRD-DKRG 253
V D DKRG
Sbjct: 271 PVVEDVDKRG 280
>AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical
protein Y68A4A.10b protein.
Length = 277
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 315 ASATVTSGLDTVWTNGYRLQTPRLSSRTSDVSCLPGQS 202
A A+VT G D VW + ++ L + + SCLP Q+
Sbjct: 158 AEASVTCGNDAVWVDSRGIRGNTLIASIAPQSCLPCQT 195
>AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical
protein Y68A4A.10a protein.
Length = 459
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 315 ASATVTSGLDTVWTNGYRLQTPRLSSRTSDVSCLPGQS 202
A A+VT G D VW + ++ L + + SCLP Q+
Sbjct: 158 AEASVTCGNDAVWVDSRGIRGNTLIASIAPQSCLPCQT 195
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 153 KTLHPAVHAGIL-ARLSDSDQEDMK 224
K+LHP+VHA +L +SD D ED++
Sbjct: 996 KSLHPSVHALVLEPMMSDPDGEDVE 1020
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 153 KTLHPAVHAGIL-ARLSDSDQEDMK 224
K+LHP+VHA +L +SD D ED++
Sbjct: 1081 KSLHPSVHALVLEPMMSDPDGEDVE 1105
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 315 ASATVTSGLDTVWTNGYRLQTPRLSSRTSDVSCLPGQS 202
A A+VT G D VW + ++ L + + +CLP Q+
Sbjct: 164 AEASVTCGNDAVWVDSRGIRGNTLIASIAPQNCLPCQT 201
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 267 YRLQTPRLSSRTSDVSCLPGQSPIIELRYQRVPLDVKFSPDLRASPVLS*CPTHLEL*GR 88
Y +TP S+ T+DVS + IE D + + D+ ++P+L+ H++L GR
Sbjct: 586 YWQETPETSTATTDVSQMTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL-GR 644
Query: 87 RS 82
S
Sbjct: 645 IS 646
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,249,666
Number of Sequences: 27780
Number of extensions: 329681
Number of successful extensions: 1010
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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