Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00062
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   6.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 230 RQNQRDGPYAKLSVLQLNVHLLSLTFSTK 144
           R  + D P+AKL    L+ H++++   TK
Sbjct: 196 RVPEEDNPHAKLYDYDLSSHVITILDWTK 224


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 362 QVLQNANLNHHCSTPMCIHQV 424
           Q +++ N  +H   P CIH++
Sbjct: 342 QYVRHKNTPYHTPEPDCIHEL 362


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 18/67 (26%), Positives = 26/67 (38%)
 Frame = -3

Query: 388 VQICILEDLMDNHL*RSYVVYTAHLPMESPFYQVSHIPKSLNSMNIWILHRPRDKTKGMV 209
           +++ I ED  +  L   YVV T        F  +  +    NS NIW LH          
Sbjct: 222 LEVAIKED-REAGLIPFYVVATLGTTSSCTFDNLEELGPVCNSNNIW-LHVDAAYAGSSF 279

Query: 208 LTPSFPF 188
           + P F +
Sbjct: 280 ICPEFRY 286


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = -2

Query: 212 GPYAKLSVLQLNVHLLSLTFSTKITRFMSRASIKDYS*CW 93
           G + +  VL +   LLS+ FS           ++    CW
Sbjct: 156 GSWKRARVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCW 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,163
Number of Sequences: 336
Number of extensions: 4267
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)