Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00062
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 168 5e-42
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 168 5e-42
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 84 1e-16
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 84 1e-16
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 76 3e-14
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 76 3e-14
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 75 8e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 73 2e-13
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 70 2e-12
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 69 4e-12
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 66 4e-11
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 66 4e-11
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 66 4e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 62 6e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 1e-09
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 56 4e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 4e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 9e-08
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 54 1e-07
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 52 6e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 5e-06
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 40 0.002
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.004
AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine re... 31 0.73
AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical ... 28 9.0
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 168 bits (408), Expect = 5e-42
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +1
Query: 256 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 435
+LNL WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCL
Sbjct: 35 TLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCL 94
Query: 436 SLLDEEKDWRPAITIKQILLGIQDL 510
SLLDE KDW+P+I+IKQ+L+GIQDL
Sbjct: 95 SLLDENKDWKPSISIKQLLIGIQDL 119
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 155 MSGIASARLAEERKAWRKDHPFGFVARPMKNPD 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN D
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNAD 33
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 480 KANFVGYSRSLNEPNVKDPAQAEAYTIYCQNRLEYDK 590
K +G LN PN++DPAQAEAY IYCQNR EY+K
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 168 bits (408), Expect = 5e-42
Identities = 68/85 (80%), Positives = 80/85 (94%)
Frame = +1
Query: 256 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 435
+LNL WECAIPG+K T WEGGLY++RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCL
Sbjct: 35 TLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCL 94
Query: 436 SLLDEEKDWRPAITIKQILLGIQDL 510
SLLDE KDW+P+I+IKQ+L+GIQDL
Sbjct: 95 SLLDENKDWKPSISIKQLLIGIQDL 119
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 155 MSGIASARLAEERKAWRKDHPFGFVARPMKNPD 253
MSGIA+ RLAEERK WRKDHPFGF+A+P+KN D
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNAD 33
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 480 KANFVGYSRSLNEPNVKDPAQAEAYTIYCQNRLEYDK 590
K +G LN PN++DPAQAEAY IYCQNR EY+K
Sbjct: 110 KQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N++TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + IL IQ L
Sbjct: 92 L--QNRWSPTYDVAAILTSIQSL 112
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 510 LNEPNVKDPAQAEAYTIYCQNRLEYDK 590
L+EPN PA + A +Y +NR EY+K
Sbjct: 113 LDEPNPNSPANSLAAQLYQENRREYEK 139
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N++TWE I G + TP+E G +KL + F ++YP+ PP KF +FHPNVY G++CL +
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + IL IQ L
Sbjct: 92 L--QNRWSPTYDVAAILTSIQSL 112
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 510 LNEPNVKDPAQAEAYTIYCQNRLEYDK 590
L+EPN PA + A +Y +NR EY+K
Sbjct: 113 LDEPNPNSPANSLAAQLYQENRREYEK 139
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+L W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L W PA+TI ++LL I L
Sbjct: 89 L--RSQWSPALTISKVLLSICSL 109
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+L W+ I G +P++GG++ L + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L W PA+TI ++LL I L
Sbjct: 89 L--RSQWSPALTISKVLLSICSL 109
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 74.5 bits (175), Expect = 8e-14
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +1
Query: 271 TWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDE 450
+W C +PG +G+PWEGG Y++ + F +P PP C+F+ PL HPNV G++ L +L++
Sbjct: 70 SWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQ 128
Query: 451 EKDWRPAITIKQILLGIQDL 510
E W ++K++L I +L
Sbjct: 129 E-HWSSETSLKKLLREISNL 147
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N WEC I G + T + G++ R+ F DYP SPPK +F +FHPN+Y G VC+S+
Sbjct: 33 NFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISI 92
Query: 442 LDEEKD-----------WRPAITIKQILLGI 501
L D W P +I++ILL +
Sbjct: 93 LHAPGDDPTGYELSNERWSPVQSIEKILLSV 123
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +1
Query: 232 EAYEESRCS-LNLMTWECA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHP 405
+AYE C NL+ W IP K+ P+ G +K+ + F DYP PPK FE ++HP
Sbjct: 20 KAYENVECEETNLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHP 77
Query: 406 NVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDL 510
NV G CL ++ E +W+PA +Q+++ + L
Sbjct: 78 NVDEEGKFCLPIVTAE-NWKPATKTEQVMMALLSL 111
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 68.9 bits (161), Expect = 4e-12
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N + I G +P+ GG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 32 NARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W PA+ I+ +LL IQ L
Sbjct: 92 LKDK--WSPALQIRTVLLSIQAL 112
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 442 LDE-----------EKDWRPAITIKQILLGI 501
L + E+ W P T++ ILL +
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSV 122
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 438
NL + I G TP+ GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 439 LLDEEKDWRPAITIKQILLGIQDL 510
+L ++ W ++T++ +LL IQ L
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQAL 116
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 442 LDEEKD-----------WRPAITIKQILLGIQDL 510
L D W P +++ ILL + L
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISL 131
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +1
Query: 241 EESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF--EPPLFHPNVY 414
+ + S +L W+ + G +GT + G ++ L+ F YP + P+ F E HP++Y
Sbjct: 27 DNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIY 86
Query: 415 PSGTVCLSLLDEEKDWRPAITIKQILLGIQDLSMS 519
+G +CLS+L + DW PA++++ + L I + S
Sbjct: 87 SNGHICLSILSD--DWTPALSVQSVCLSILSMLSS 119
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Frame = +1
Query: 286 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 447
I G TP+ GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 448 ----EEKDWRPAITIKQILLGIQDL 510
E+ W P ++ Q+L+ IQ++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEV 533
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 462
I G + TP+EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 463 RPAITIKQILLGIQ 504
++TI ++L+ IQ
Sbjct: 444 PVSMTIYKVLIVIQ 457
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N++ W I G TP+EGG+Y +++F D+P PP P + + +CLS+
Sbjct: 36 NILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI 93
Query: 442 LDEEKD-WRPAITIKQILLGI 501
D D W PA T+ I+ G+
Sbjct: 94 SDYHPDTWNPAWTVSTIITGL 114
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 396
NLM + I G +GTP+ GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 397 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLSMS 519
+HPN+ +GT+CL +L ++ W ++T++ +LL +Q + S
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAMLCS 148
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N++ W + G TP+ GG Y ++IFK+++P SPP P + + +CLS+
Sbjct: 47 NILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSI 104
Query: 442 LD-EEKDWRPAITIKQILLGI 501
D + W P T+ IL+G+
Sbjct: 105 SDYHPESWNPGWTVSAILIGL 125
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 232 EAYEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV 411
E Y NL W I G GT +EGG+Y R+IF DYP PP P +
Sbjct: 27 EMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRF 84
Query: 412 YPSGTVCLSLLD-EEKDWRPAITIKQILLGI 501
+ VCLS+ + W P+ +I+ LL +
Sbjct: 85 ELNKKVCLSISGYHPETWLPSWSIRTALLAL 115
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 5e-06
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 292 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDE 450
G K T +E G++++R+ D YP P F +FHPN+ SGTVCL ++++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQ 94
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +1
Query: 310 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 477
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 478 IKQILLGIQDL 510
+ ++ G+ L
Sbjct: 132 LTDVVHGLVSL 142
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 301 GTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 477
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 478 IKQILLGI 501
++ +LL +
Sbjct: 113 MEDVLLNL 120
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 ESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS- 420
E + L W +I G TP+E +Y L++ +YP PP +F + V S
Sbjct: 31 EDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSN 90
Query: 421 GTVCLSLLDEEKDWRPAITIKQILLGIQ 504
G + L ++W + IK +L I+
Sbjct: 91 GVIDKRNLTTLRNWSNSYMIKTVLEDIR 118
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +1
Query: 286 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 420
I G TP+E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>AC006675-1|AAK84559.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein33 protein.
Length = 334
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -1
Query: 729 SVVLLF*SPVFTFILLFRQWLSSLTLHCPILIF 631
S ++LF S +F + ++RQ+LS L + C ++I+
Sbjct: 110 SALILFTSRIFMIMNMYRQYLSHLRIFCELMIY 142
>AF067609-1|ABB51195.1| 394|Caenorhabditis elegans Hypothetical
protein C23H5.11 protein.
Length = 394
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = -1
Query: 327 IQPTFPWSPLFTRYRTFPSH*IQ*TSGFFIGLATKPK--GWSLRQAFRSSAKRALAIPDI 154
I + P+ + RTF SH S FF G+A +PK S + S R +A +
Sbjct: 277 ISYSLPFPLMLVLSRTFRSHLFHLISNFFQGVARRPKIRKDSALRKMTSQIARHMAFSKL 336
Query: 153 FYKNNSIYEPSFN 115
+N+ + E ++
Sbjct: 337 EMENSELDERMYS 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,252,574
Number of Sequences: 27780
Number of extensions: 401651
Number of successful extensions: 1046
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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