Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00062
(804 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 142 2e-34
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 87 1e-17
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 87 1e-17
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 87 1e-17
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 86 3e-17
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 85 4e-17
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 79 3e-15
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 79 3e-15
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 79 5e-15
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 79 5e-15
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 78 8e-15
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 78 8e-15
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 78 8e-15
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 78 8e-15
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 78 8e-15
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 77 1e-14
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 77 2e-14
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 76 2e-14
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 76 2e-14
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 76 2e-14
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 75 4e-14
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 74 1e-13
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 74 1e-13
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 73 2e-13
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 72 4e-13
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 71 7e-13
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 71 7e-13
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 71 1e-12
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 70 2e-12
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 70 2e-12
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 67 1e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 66 2e-11
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 66 3e-11
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 62 3e-10
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 61 7e-10
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 61 7e-10
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 60 2e-09
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 58 5e-09
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 58 7e-09
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 56 2e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 55 5e-08
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 50 1e-06
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 50 1e-06
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 50 1e-06
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 2e-06
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 49 4e-06
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 48 1e-05
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 47 1e-05
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 47 1e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 46 2e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 45 7e-05
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 42 4e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 38 0.008
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 38 0.010
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 33 0.17
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 33 0.22
At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase famil... 30 2.1
At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase famil... 30 2.1
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 142 bits (345), Expect = 2e-34
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +1
Query: 256 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 435
++NLM W C IPGK GT WEGG + L M F +DYPS PPKCKF FHPNVYPSGTVCL
Sbjct: 36 TVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCL 95
Query: 436 SLLDEEKDWRPAITIKQILLGIQDL 510
S+L+E+ WRPAIT+KQIL+GIQDL
Sbjct: 96 SILNEDYGWRPAITVKQILVGIQDL 120
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +2
Query: 158 SGIASARLAEERKAWRKDHPFGFVARPMKNPD 253
SGIA RLAEERK+WRK+HP GFVA+P D
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQD 34
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 480 KANFVGYSRSLNEPNVKDPAQAEAYTIYCQNRLEYDK 590
K VG L+ PN DPAQ + Y ++CQ+ +EY K
Sbjct: 111 KQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKK 147
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 87.4 bits (207), Expect = 1e-17
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + IL IQ L
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSL 112
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 87.4 bits (207), Expect = 1e-17
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + IL IQ L
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSL 112
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 87.4 bits (207), Expect = 1e-17
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+M W I G TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + IL IQ L
Sbjct: 92 L--QNQWSPIYDVAAILTSIQSL 112
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 85.8 bits (203), Expect = 3e-17
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+M W I G + TPW+GG +KL + F +DYP+ PP +F +FHPN+Y G++CL +
Sbjct: 32 NIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDI 91
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W P + +L IQ L
Sbjct: 92 L--QNQWSPIYDVAAVLTSIQSL 112
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 510 LNEPNVKDPAQAEAYTIYCQNRLEYDK 590
L +PN PA AEA ++ +N+ EY++
Sbjct: 113 LCDPNPDSPANAEAARLFSENKREYNR 139
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 85.4 bits (202), Expect = 4e-17
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +1
Query: 256 SLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCL 435
S N+ W I G GTP+EGG++ L + F DYP PPK F+ P++HPN+ G++C+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 436 SLLDEEKDWRPAITIKQILLGI 501
++L ++ W PA+ ++++LL I
Sbjct: 93 NILKDK--WTPALMVEKVLLSI 112
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ W+ I G K T +EG Y+L + F +DYP PPK KFE FHPNV G +CL +
Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDI 122
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W A ++ ILL IQ L
Sbjct: 123 LQDK--WSSAYDVRTILLSIQSL 143
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPNV +G++CL +
Sbjct: 29 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 78.6 bits (185), Expect = 5e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 59 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 118
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 119 LKEQ--WSPALTISKVLLSICSL 139
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 78.6 bits (185), Expect = 5e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 30 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 89
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 90 LKEQ--WSPALTISKVLLSICSL 110
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 77.0 bits (181), Expect = 1e-14
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+TI ++LL I L
Sbjct: 89 LKEQ--WSPALTISKVLLSICSL 109
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G +CL +
Sbjct: 29 DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W PA+TI ++LL I L
Sbjct: 89 LKDQ--WSPALTISKVLLSICSL 109
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+T+ ++LL I L
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSL 109
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F ++HPN+ +G++CL +
Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA+T+ ++LL I L
Sbjct: 89 LKEQ--WSPALTVSKVLLSICSL 109
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/83 (43%), Positives = 48/83 (57%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ W+ I G K T +EG Y+L + F +DYP PK KFE FHPNV G +CL +
Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDI 123
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W A ++ ILL IQ L
Sbjct: 124 LQDK--WSSAYDVRTILLSIQSL 144
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 438
NL IPG GTP+EGG +++ + D YP PPK +F ++HPN+ SG +CL
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 439 LLDEEKDWRPAITIKQILLGIQDL 510
+L ++ W PA+T+K L+ IQ L
Sbjct: 91 ILKDQ--WSPALTLKTALVSIQAL 112
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 74.1 bits (174), Expect = 1e-13
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F +FHPN+ +G++CL +
Sbjct: 29 DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 88
Query: 442 LDEEKDWRPAITIKQILLGIQ 504
L E+ W PA+TI ++ L Q
Sbjct: 89 LKEQ--WSPALTISKVTLIFQ 107
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 74.1 bits (174), Expect = 1e-13
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
++ W+ I G +P+ GG++ + + F DYP PPK F+ ++HPN+ G++CL +
Sbjct: 30 DIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDI 89
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L E+ W PA T ++LL I L
Sbjct: 90 LKEQ--WSPAPTTSKVLLSICSL 110
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
NL W I G GTP+EGG++ L +IF DYP PPK F+ ++H NV +G + +++
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L + W PA+TI ++L I+ +
Sbjct: 124 LRD--SWSPALTITKVLQAIRSI 144
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 280 CA-IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEK 456
CA I G GTP+E GL+++++ D+P SPPK F +FHPNV +G +C++ L +K
Sbjct: 43 CADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTL--KK 100
Query: 457 DWRPAITIKQIL 492
DW P++ ++ +L
Sbjct: 101 DWNPSLGLRHVL 112
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W PA+ I+ +LL IQ L
Sbjct: 93 LKDK--WSPALQIRTVLLSIQAL 113
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/83 (36%), Positives = 51/83 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 442 LDEEKDWRPAITIKQILLGIQDL 510
L ++ W PA+ I+ +LL IQ L
Sbjct: 93 LKDK--WSPALQIRTVLLSIQAL 113
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Frame = +1
Query: 169 KCTFS*RTESLA*GPSLWFCREAYEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFK 348
K FS R S A S W +S N+ W I G T +EGG + M F
Sbjct: 37 KLAFSFRNNSKA---SPWNLSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFP 93
Query: 349 DDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITIKQILL 495
+YP+SPP +F ++HPNVY G VC+S+L D W P T++ I+L
Sbjct: 94 QNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIML 153
Query: 496 GI 501
I
Sbjct: 154 SI 155
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ W I G T +EGG + M F +YP+SPP +F ++HPNVYP G VC+S+
Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISI 92
Query: 442 LDEEKD-----------WRPAITIKQILLGI 501
L D W P T++ I+L I
Sbjct: 93 LHPPGDDPSGYELASERWTPVHTVESIMLSI 123
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +1
Query: 286 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWR 465
I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +L ++ W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WS 65
Query: 466 PAITIKQILLGIQDL 510
PA+ I+ +LL IQ L
Sbjct: 66 PALQIRTVLLSIQAL 80
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ + I G +P+EGG++KL + ++YP + PK +F ++HPN+ G +CL +
Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 442 LDEEKDWRPAITIKQILL 495
L ++ W PA+ I+ +LL
Sbjct: 93 LKDK--WSPALQIRTVLL 108
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 438
N+ W I G TP+EGG+++L + YP PP+ +F +FHPNV + +G +CL
Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLD 92
Query: 439 LLDEEKDWRPAITIKQILLGI 501
+L + W PA T++ + I
Sbjct: 93 IL--KNAWSPAWTLQSVCRAI 111
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ W +I G T +EGG + M F ++YP SPP F ++HPNVY G VC+S+
Sbjct: 34 NVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISI 93
Query: 442 LDEEKD-----------WRPAITIKQILLGI 501
L D W P T++ I+L I
Sbjct: 94 LHPPGDDPHGYELASERWTPVHTVESIVLSI 124
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ WE + G G P+E G++ + + YP PPK F+ +FHPN+ G + + +
Sbjct: 58 NIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDI 117
Query: 442 LDEEKDWRPAITIKQILLGI 501
L W A+TI +LL I
Sbjct: 118 LGSR--WSSALTINLVLLSI 135
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 250 RCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGT 426
R + NL W + G GT + Y L++ F YP P+ F PP HP++Y +G
Sbjct: 38 RVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGH 97
Query: 427 VCLSLLDEEKDWRPAITIKQILLGIQDLSMS 519
+CL +L + W PA+T+ + + I + S
Sbjct: 98 ICLDILYD--SWSPAMTVSSVCISILSMLSS 126
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 61.3 bits (142), Expect = 7e-10
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +1
Query: 250 RCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPL-FHPNVYPSGT 426
R S NL W + G GT + Y+L++ F + YP P+ F+ P HP++Y +G
Sbjct: 38 RVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGH 97
Query: 427 VCLSLLDEEKDWRPAITIKQILLGIQDLSMSLT*KIQRKLKPTQFIVK 570
+CL +L + W PA+ + I L I LSM + +++K K +K
Sbjct: 98 ICLDVLYD--SWSPAMRLSSICLSI--LSMLSSSSVKQKPKDNDHYLK 141
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLS 438
NL W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL
Sbjct: 42 NLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLD 101
Query: 439 LLDEEKDWRPAITIKQILLGIQDLSMSLT*K 531
+L + W PA+T+ I + I + S T K
Sbjct: 102 ILYD--SWSPAMTVSSICISILSMLSSSTEK 130
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKF-EPPLFHPNVYPSGTVCLS 438
NL W + G GT + Y+L++ F + YP P+ F P HP++Y +G +CL
Sbjct: 42 NLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLD 101
Query: 439 LLDEEKDWRPAITIKQILLGIQDLSMS 519
+L + W PA+T+ + + I + S
Sbjct: 102 ILYD--SWSPAMTVNSVCISILSMLSS 126
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 271 TWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD- 447
T + I G + T + G++ L++ + YP PP F P++HPN+ SG +CL +L+
Sbjct: 46 TIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNL 105
Query: 448 -EEKDWRPAITIKQILLGIQ 504
+ W+P++ I +L ++
Sbjct: 106 PPKGAWQPSLNISTVLTSMR 125
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Frame = +1
Query: 211 PSLWFCREAYEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP 390
P + F R AYE SR L I G +GTP+ GL+ + F D YPS+PP +
Sbjct: 349 PEMIFVR-AYE-SRMDL----LRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHS 402
Query: 391 P--LFHPNVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDLSMS 519
+PN+Y G VCLSLL ++ + W P T+ Q+L+ IQ L ++
Sbjct: 403 GGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILN 453
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 253 CSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGT 426
C + I G +GTP+ GL+ + F D YPS PPK + +PN+Y G
Sbjct: 630 CESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGK 689
Query: 427 VCLSLLD-----EEKDWRP-AITIKQILLGIQDLSMS 519
VCLSL+ + + W P T+ Q+L+ IQ L ++
Sbjct: 690 VCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILN 726
Score = 54.4 bits (125), Expect = 8e-08
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Frame = +1
Query: 232 EAYEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHP 405
EA C + I G +GTP+ GL+ + F D YPS PP + +P
Sbjct: 289 EAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINP 348
Query: 406 NVYPSGTVCLSLL-----DEEKDWRP-AITIKQILLGIQDLSMS 519
N+Y G VCLSLL + W P T+ Q+L+ IQ L ++
Sbjct: 349 NLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILN 392
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 CSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGT 426
C + I G +GTP+ GL+ + F D YPS PP + +PN+Y G
Sbjct: 942 CESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGK 1001
Query: 427 VCLSL 441
V +S+
Sbjct: 1002 VLVSI 1006
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+++ W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSM 90
Query: 442 LD-EEKDWRPAITIKQILLGIQDLSM 516
D + W P ++ IL G+ M
Sbjct: 91 SDFHPESWNPMWSVSSILTGLLSFMM 116
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+LM +E I +G + G + + YP PK K + ++HPN+ G VCL++
Sbjct: 59 DLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNI 117
Query: 442 LDEEKDWRPAITIKQILLGI 501
L E DW+P + I ++ G+
Sbjct: 118 LRE--DWKPVLNINTVIYGL 135
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
+++ W + G +GTP+ GG Y ++ F +YP PP P + +CLS+
Sbjct: 33 DILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSM 90
Query: 442 LD-EEKDWRPAITIKQILLGIQDLSM 516
D + W P ++ IL G+ M
Sbjct: 91 SDFHPESWNPMWSVSSILTGLLSFMM 116
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Frame = +1
Query: 286 IPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPP--LFHPNVYPSGTVCLSLLDE--- 450
I G GTP++ GL+ DYPS PP + +PN+Y G VCLSLL+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLNTWTG 945
Query: 451 --EKDWRP-AITIKQILLGIQDLSMS 519
+ W P + +I Q+L+ +Q L ++
Sbjct: 946 RGNEVWDPKSSSILQVLVSLQGLVLN 971
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 468
G K + +EGG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQ--TWSP 95
Query: 469 AITIKQI 489
+ +
Sbjct: 96 MFDLVNV 102
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 GKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRP 468
G K + ++GG++K+R+ D YP P F ++HPNV SG+VCL ++++ W P
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQ--TWSP 95
Query: 469 AITIKQI 489
+ +
Sbjct: 96 MFDLVNV 102
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Frame = +1
Query: 253 CSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEP--PLFHPNVYPSGT 426
C + A+ G GTP+ GL+ ++ YP PP + +PN+Y SG
Sbjct: 687 CEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGR 746
Query: 427 VCLSLLDE-----EKDWRP-AITIKQILLGIQDLSMS 519
VCLSLL+ + W + +I Q+LL Q L ++
Sbjct: 747 VCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLN 783
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSL 441
+ +W I G T +EG +++L++ DYP SPP +F+ + V P +G V S
Sbjct: 44 MQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSH 103
Query: 442 LDEEKDWRPAITIKQILLGIQDLSMS 519
+WR T++ +L+ ++ MS
Sbjct: 104 FPMLSNWRREFTMEDLLIQLKKEMMS 129
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSL 441
+ +W I G T +EG +++L++ +YP SPP +F+ + V P +G V SL
Sbjct: 44 MQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSL 103
Query: 442 LDEEKDWRPAITIKQILLGIQDLSMS 519
+WR T++ IL+ ++ M+
Sbjct: 104 FPMLTNWRREYTMEDILVKLKKEMMT 129
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 262 NLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 441
N+ W+ AI G T +EGG+Y R+ DYP PP P + + +CLS+
Sbjct: 39 NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSI 96
Query: 442 LD-EEKDWRPAITIKQILLGI 501
+ + W+P+ +++ L+ +
Sbjct: 97 SNYHPEHWQPSWSVRTALVAL 117
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +1
Query: 238 YEESRCSLNLMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-Y 414
Y+ + +L + G + ++GG++K+++ + YP P F ++HPNV
Sbjct: 20 YKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDE 79
Query: 415 PSGTVCLSLLDEEKDWRP 468
SG VCL ++++ W P
Sbjct: 80 SSGAVCLDVINQ--TWSP 95
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 265 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSL 441
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 46 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKK 105
Query: 442 LDEEKDWRPAITIKQILLGI-QDLSMSLT*KIQRKLKPTQF 561
+W+ T++ IL+ + +++S S K+ + + T F
Sbjct: 106 FGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 146
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 LMTWECAIPGKKGTPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSL 441
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 45 MRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKK 104
Query: 442 LDEEKDWRPAITIKQIL 492
+W+ T++ IL
Sbjct: 105 FGVLANWQRQYTMEDIL 121
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +1
Query: 265 LMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 438
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 46 MRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 105
Query: 439 LLDEEKDWRPAITIKQILLGI-QDLSMSLT*KIQRKLKPTQF 561
+W+ T++ IL+ + +++S S K+ + + T F
Sbjct: 106 KFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEGTCF 147
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 265 LMTWECAIPGKKG-TPWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 438
+ +W I G T EG +Y+L++ DYP PP +F + V + +G V
Sbjct: 45 MRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSK 104
Query: 439 LLDEEKDWRPAITIKQIL 492
+W+ T++ IL
Sbjct: 105 KFGVLANWQRQYTMEDIL 122
>At1g23440.2 68414.m02936 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 94
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 602 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 736
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
>At1g23440.1 68414.m02937 pyrrolidone-carboxylate peptidase family
protein similar to Pyrrolidone-carboxylate peptidase
(Swiss-Prot:O58321) [Pyrococcus horikoshii]; contains
Prosite PS00141: Eukaryotic and viral aspartyl proteases
active site
Length = 217
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 602 AGTCNGCC*VNIRIGQWSVNELSHCLKSSINVKTGD*NSNTTLFW 736
+G C G C V G+ + ++L L+SS V +GD N+N T+ W
Sbjct: 45 SGLCLGSCSVLDTAGEGAKSKLYEVLESS--VVSGDKNNNGTVVW 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,205,170
Number of Sequences: 28952
Number of extensions: 372321
Number of successful extensions: 965
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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