Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00061
         (367 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p pro...    60   9e-10
AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-P...    60   9e-10
BT003524-1|AAO39528.1|  541|Drosophila melanogaster RE22242p pro...    27   5.7  
AE014296-3202|AAF49119.2|  541|Drosophila melanogaster CG32209-P...    27   5.7  

>BT024350-1|ABC86412.1|  268|Drosophila melanogaster IP09446p
           protein.
          Length = 268

 Score = 60.1 bits (139), Expect = 9e-10
 Identities = 22/25 (88%), Positives = 25/25 (100%)
 Frame = +2

Query: 260 PYVCYVTLPGGACFGSFQNCPTKAE 334
           PY+C+VTLPGG+CFGSFQNCPTKAE
Sbjct: 62  PYICFVTLPGGSCFGSFQNCPTKAE 86



 Score = 37.9 bits (84), Expect = 0.004
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 159 MEALQEFWQVKXXXXXXXXXXXLVIYESVPAAIRP 263
           +EALQEFWQ+K           LVIYES+P+  +P
Sbjct: 28  VEALQEFWQMKQSRGAELKNGALVIYESIPSNSQP 62


>AE014134-1854|AAF52926.1|  268|Drosophila melanogaster CG13139-PA
           protein.
          Length = 268

 Score = 60.1 bits (139), Expect = 9e-10
 Identities = 22/25 (88%), Positives = 25/25 (100%)
 Frame = +2

Query: 260 PYVCYVTLPGGACFGSFQNCPTKAE 334
           PY+C+VTLPGG+CFGSFQNCPTKAE
Sbjct: 62  PYICFVTLPGGSCFGSFQNCPTKAE 86



 Score = 37.9 bits (84), Expect = 0.004
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +3

Query: 159 MEALQEFWQVKXXXXXXXXXXXLVIYESVPAAIRP 263
           +EALQEFWQ+K           LVIYES+P+  +P
Sbjct: 28  VEALQEFWQMKQSRGAELKNGALVIYESIPSNSQP 62


>BT003524-1|AAO39528.1|  541|Drosophila melanogaster RE22242p
           protein.
          Length = 541

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 PYVCYVTLPGGACFGSFQNCPTKA 331
           PY  Y  +P   C G+ Q+CPT++
Sbjct: 345 PYTMYFRMPH-RCHGNLQSCPTRS 367


>AE014296-3202|AAF49119.2|  541|Drosophila melanogaster CG32209-PB
           protein.
          Length = 541

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 PYVCYVTLPGGACFGSFQNCPTKA 331
           PY  Y  +P   C G+ Q+CPT++
Sbjct: 345 PYTMYFRMPH-RCHGNLQSCPTRS 367


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,071,515
Number of Sequences: 53049
Number of extensions: 187192
Number of successful extensions: 392
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 392
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)