Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00059
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   4.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.0  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.0  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = +3

Query: 267 IKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQC 392
           I DC          C +    +Q  C+   +  LC  N+D C
Sbjct: 69  INDCKVNPCENGGTCVDKINAFQCICKEGWEGALCNINTDDC 110


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = +3

Query: 222 TCLRNQRTRRRMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQR 362
           T L+N +  R   +C+ D    T     +     ET ++ C    Q+
Sbjct: 30  TILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGITETMKNGCVKCEQK 76


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 86  SLDEKRYHEAEIARV 130
           SLDEK+Y   E+ RV
Sbjct: 334 SLDEKKYILQEVVRV 348


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 289 QTPDAWCAQTSTKPGNRIAKYTASDAY 369
           Q  D W      + G R+    ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 289 QTPDAWCAQTSTKPGNRIAKYTASDAY 369
           Q  D W      + G R+    ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 289 QTPDAWCAQTSTKPGNRIAKYTASDAY 369
           Q  D W      + G R+    ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 289 QTPDAWCAQTSTKPGNRIAKYTASDAY 369
           Q  D W      + G R+    ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/36 (22%), Positives = 14/36 (38%)
 Frame = +3

Query: 429 YGTCREMPDCTESEMSDFPRRMRDWLLTSCATWLNV 536
           YG        +  +  + P+  R W     A W+N+
Sbjct: 15  YGPTERWQRLSFDDEDNLPKDPRQWTREHVAQWINL 50


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/36 (22%), Positives = 14/36 (38%)
 Frame = +3

Query: 429 YGTCREMPDCTESEMSDFPRRMRDWLLTSCATWLNV 536
           YG        +  +  + P+  R W     A W+N+
Sbjct: 15  YGPTERWQRLSFDDEDNLPKDPRQWTREHVAQWINL 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,052
Number of Sequences: 336
Number of extensions: 3939
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)