Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00059
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 38 0.012
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 31 1.3
SB_59355| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.3
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_27546| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072) 29 4.1
SB_23132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_11051| Best HMM Match : DUF1078 (HMM E-Value=1.7) 29 4.1
SB_41161| Best HMM Match : TSP_1 (HMM E-Value=6e-22) 29 4.1
SB_41393| Best HMM Match : WSC (HMM E-Value=0.06) 29 5.4
SB_13474| Best HMM Match : Keratin_B2 (HMM E-Value=2.6) 29 5.4
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 28 7.1
SB_20617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_4591| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_56012| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 28 9.4
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 CNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC-LCLDNSDQCRGPQYHHVQIEYYG 434
C C CP D VC+ FN+ +++ CE+++ C L + + + G + G
Sbjct: 141 CECPTSCPDLDDP---VCSIFNQEFKNACEMHKYACKLQMSMAIKNAGACVKPTDPKMMG 197
Query: 435 TCREMPDCTESEMSDFPRRMRDWL 506
M DC + + FP R DWL
Sbjct: 198 ----MTDCPKWMLEQFPYRFLDWL 217
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/85 (27%), Positives = 33/85 (38%)
Frame = +3
Query: 171 TKKSTWKTLA*KSTAAQTCLRNQRTRRRMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 350
TK +T +T TC +Q + C+ P T T F ET + E
Sbjct: 295 TKVLPPQTCTVTTTKLATCTPSQTCYPNVPACVL-IPATTPCVATTTTCFKETSVTKTEF 353
Query: 351 YRQRCLCLDNSDQCRGPQYHHVQIE 425
R C + + + R P Y HV +E
Sbjct: 354 IRPTVTCTETTTKIRPPSYDHVHVE 378
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 TASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVV--RNTTTFKSSITE 435
T S T T TP + TST YT++ +Y STT ++ +TT++ S+ +
Sbjct: 77 TTSYTTTTSYTPTT--SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSY 134
Query: 436 RAEKCLTALKARCLTSPVACGTGF 507
+ T + T+ C T +
Sbjct: 135 TSTTSYTCTTSYTCTTSYTCTTSY 158
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 TASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVV--RNTTTFKSSITE 435
T S T T T + T+T YT++ +Y STT ++ +TT++ S+ +
Sbjct: 65 TTSYTTTTSYTSTT--SYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSY 122
Query: 436 RAEKCLTALKARCLTSPVACGTGF 507
+ T+ + T+ C T +
Sbjct: 123 TSTTSYTSTTSYTSTTSYTCTTSY 146
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +1
Query: 265 ASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSITERAE 444
AS PT D+ + P +++ S TLI + + F SSI E+
Sbjct: 478 ASSAAPTSSRSDSGDYSAAPPPLPERRMLNSTNTPTSPTLIVTHAKISLKFSSSIAEKLA 537
Query: 445 KCLTALKARCLTS 483
K +TA+ A C+++
Sbjct: 538 KDVTAILAFCVSN 550
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 219 QTCLRNQRTRRRMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 365
+ C+ + R R C C CP S+R VC + T+ S CE++R C
Sbjct: 2988 EVCVTDSRNVPR-CVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHRTAC 3034
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 255 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 368
+C C KDCP E D+ VC +T+ ++C + +Q C+
Sbjct: 1787 VCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQACM 1821
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 255 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 365
+C+C DC ET + +C + +T+ ++C + ++ C
Sbjct: 2151 VCSCPDDCTNET---KPICASDGQTYDNECLMQKRAC 2184
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 276 CPYETDSRRMVCTNFNETWQSDCEVYRQRCL 368
CP D VC + N T+ S+C++ R CL
Sbjct: 219 CPDCKDKSDPVCGSDNVTYASECQLRRAACL 249
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/79 (31%), Positives = 35/79 (44%)
Frame = +1
Query: 253 ACVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSIT 432
A VTA+ T T A TST A T + A A+TT ++A V TT ++T
Sbjct: 172 ATVTAAATATATATATATATTTSTATVTATATVTVT-ATAATT-VTATVTAATTVTVTVT 229
Query: 433 ERAEKCLTALKARCLTSPV 489
A +T +T+ V
Sbjct: 230 ATAATTVTVTVTATVTATV 248
>SB_59355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 206 VHCSADVSAKSTNTETHV*LHQGLSLRDRLQ 298
VHC A VS +T T +V H GLSL + Q
Sbjct: 102 VHCHAGVSRSATVTVAYVMQHLGLSLNEAYQ 132
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 213 AAQTCLRNQRTRRRMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 365
A QTC+ + +C + CP S VC + +T+ S+C V + C
Sbjct: 1055 AEQTCVISNGKAECVCPTVDQCP----SGSTVCASDGKTYASECHVKVRNC 1101
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 240 RTRRRMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQCRGPQYHH-- 413
+T R +C +++C + VC + +T+QS+C + + C R Q +
Sbjct: 1211 QTARCVCPTLQECAARKGA---VCASDMKTYQSECHMRVEACRANKALQVVRRGQCANCA 1267
Query: 414 -VQIEYYGTCREMPDCTE 464
V+ E+YG C E T+
Sbjct: 1268 SVKCEFYGRCVESAGVTK 1285
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 255 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 380
+C C+ CP + + VC + T++S+CE+ + C + N
Sbjct: 1428 VCICLDQCPPDNQNAS-VCGSDLVTYRSECELKAKSCNAMRN 1468
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 614 IWKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDAD 748
+W++ + DA ND+ + HE +++ + E C+ F+D CD D
Sbjct: 727 MWEFDNQDANRNDQ-LDEHE---VKSMIDLREPCMVGFMDACDFD 767
>SB_27546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 286 RQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSITERAEKCLTAL 462
+++P AW S + + Y + Y ST L+ V+N + I+ER C T L
Sbjct: 15 KKSPLAWDRTRSEEQNGKNHTYGLPNRYGSTRLLRKAVKNPKAPSTDISERI--CCTTL 71
>SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072)
Length = 196
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 524 MAERRELTPHYLKMEREAESNLTRRWANA-AIWKWCDLDAQTNDRFVSRHELFPIRAPLM 700
++ RR + +Y E E NL A W++ +D D +S E+ I PL+
Sbjct: 92 ISRRRLVNRYYQVKESEKGHNLPPDMRKELAQWEFDRVDFN-RDGVLSGREINSIIGPLL 150
Query: 701 ALEHCIAPFLDRCDAD 748
E CI F+ CD +
Sbjct: 151 FHERCIYGFVMSCDVN 166
>SB_23132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 617 WKWCDLDAQTNDRFVSRHELFPIRAPLMALEHCIAPFLDRCDAD 748
W++ + DA ND+ + HE +++ + E C+ F+D CD D
Sbjct: 1 WEFDNQDANRNDQ-LDEHE---VKSMIDLREPCMVGFMDACDFD 40
>SB_11051| Best HMM Match : DUF1078 (HMM E-Value=1.7)
Length = 284
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 283 TRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSITERAEKCL 453
T+QTP + A TS G+++ + ST+L +T TF S+TE A L
Sbjct: 146 TKQTPSSVNASTSISTGSKLG-MASVQGKQSTSLPMLPSVSTLTFGDSVTETASSRL 201
>SB_41161| Best HMM Match : TSP_1 (HMM E-Value=6e-22)
Length = 649
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 138 FSTRSLMKRMKTKKSTWKTLA*KSTAAQTCLRNQRTRRRMCNCIKDCP 281
FST ++ + T + W S + TC +RTR R CN +DCP
Sbjct: 369 FSTIDIIAAIFTASTEWSGY---SKCSVTCGVGKRTRSRQCNG-RDCP 412
>SB_41393| Best HMM Match : WSC (HMM E-Value=0.06)
Length = 361
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 330 WQS-DCEVYRQRCLCLDNSDQCRGPQYHHVQIEYYGTCREMPDCT 461
W + D + R C C ++ + +G YH+ I+YYG C P T
Sbjct: 222 WHNWDFYIKRLVCRCAQSA-KAKG--YHYFAIQYYGVCYSGPTTT 263
>SB_13474| Best HMM Match : Keratin_B2 (HMM E-Value=2.6)
Length = 232
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +3
Query: 168 KTKKSTWKTLA*KSTAAQTCLRNQRTR--RRMCNCIKDCPYETDSRRMVCTNFNETWQSD 341
KT+K+ K K Q R R++C C DC D C+ N +
Sbjct: 110 KTRKAILKDAGVKKINKQEASECMEIRYSRQICGC--DCKTFCDPATCSCS-LNGI---N 163
Query: 342 CEVYRQRCLCLDNSDQCRGPQYHH 413
C+V R C D CR PQ H
Sbjct: 164 CQVDRDSFPCGCTRDACRNPQGRH 187
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 TASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAV--VRNTTTFKSSITE 435
T S T T T + TST YT++ +Y STT ++ +TT++ S+ +
Sbjct: 23 TPSYTSTTSYTSTT--SYTSTSSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSY 80
Query: 436 RAEKCLTALKARCLTSPVACGTGF 507
+ T+ + T+ C T +
Sbjct: 81 TSTTSYTSTTSYTSTTSYTCTTSY 104
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 583 KPHASLGQCRYMEMVRSGRS 642
KPH L CR +E++R GR+
Sbjct: 727 KPHIGLETCRILELIRIGRN 746
>SB_20617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 286 RQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSITERAEKCLTAL 462
+++P AW +T ++ N Y + Y+ST L+ V+N + I+ER C T L
Sbjct: 15 KKSPLAW-DRTRSEEQNGNHTYGLPNRYSSTRLLRKAVKNPKAPSTDISERI--CCTTL 70
>SB_4591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 286 RQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKSSITERAEKCLTAL 462
+++P AW +T ++ N Y + Y ST L+ V+N + IT+R C T L
Sbjct: 15 KKSPLAW-DRTRSEEQNGNHTYGLPNRYGSTRLLRKAVKNPKAPSTDITDRI--CCTTL 70
>SB_56012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 485 PSHAGLAFNIMRDMAERRELTPHYLKMERE--AESNLTRRWAN 607
P L FNI RD E TP ++ MER + ++ T +W +
Sbjct: 44 PEENSLVFNIARDFLVTPEDTPVWIGMERAQLSSTSQTLQWTD 86
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 585 TSRVVGPMPLYGNGAIWTLRPMIDSCPVTSCSPL 686
+S + P PL + + + P+ S P+TS SPL
Sbjct: 224 SSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPL 257
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,301,662
Number of Sequences: 59808
Number of extensions: 566387
Number of successful extensions: 1872
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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