Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00059
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              29   0.062
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.1  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   9.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.4  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   9.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 255 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 365
           +C C++ CP      R VC +  + + + CE++R  C
Sbjct: 103 VCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 573 RRNQTSRVVGPMPLYGNGAIWTLRPMIDSCPVTSCSP 683
           RR ++ R+ G M +    A+W L   I S P+  C P
Sbjct: 148 RRRRSKRLAGLMIV----AVWVLAGAITSPPLLGCFP 180


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 547 GQLSTFSHVAHDVKSQSRMRRGKSDISLS 461
           G  S    +A  +    R RRG +D+SL+
Sbjct: 6   GDQSLLGSIARSLSLDRRARRGAADLSLA 34


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 423 EYYGTCREMPDCTESEMSDFPRRMRD 500
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 397 PRH*SELSRHKHRWRYTSQS 338
           PR   ELS++   W +TS S
Sbjct: 33  PRPSFELSKNGDEWTFTSSS 52


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 59  QPPRCPRGR 33
           QPP+CPR R
Sbjct: 564 QPPQCPRFR 572


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 397 PRH*SELSRHKHRWRYTSQS 338
           PR   ELS++   W +TS S
Sbjct: 35  PRPSFELSKNGDEWTFTSSS 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,421
Number of Sequences: 438
Number of extensions: 4776
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)