Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00058
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 168 2e-42
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 168 3e-42
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 168 3e-42
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 159 9e-40
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 109 2e-24
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 109 2e-24
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 108 2e-24
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 107 7e-24
03_01_0034 + 318432-318825,318902-319851 106 1e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 105 2e-23
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 95 4e-20
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 3e-18
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 71 7e-13
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 29 2.1
01_03_0230 - 14004159-14004344,14004422-14004514,14004613-140046... 29 2.1
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 2.8
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 28 5.0
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 28 5.0
07_01_0284 - 2082249-2082256,2082496-2083009 27 6.5
10_08_0005 + 14030414-14030519,14030612-14030921,14031012-140312... 27 8.7
07_03_0686 + 20697493-20697927 27 8.7
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 168 bits (409), Expect = 2e-42
Identities = 76/86 (88%), Positives = 82/86 (95%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVD+
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLC 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLAD CTGLQGFLVF++ GGG
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGG 144
Score = 130 bits (315), Expect = 5e-31
Identities = 53/59 (89%), Positives = 58/59 (98%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 168 bits (408), Expect = 3e-42
Identities = 73/86 (84%), Positives = 83/86 (96%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVD+
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLC 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLAD CTGLQGFLVF++ GGG
Sbjct: 119 LDRVRKLADNCTGLQGFLVFNAVGGG 144
Score = 113 bits (272), Expect = 8e-26
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE IS+HIGQAG+Q+GNACWELYCLEHGI+PDG MPSD T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAG 59
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 168 bits (408), Expect = 3e-42
Identities = 76/86 (88%), Positives = 81/86 (94%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVD+
Sbjct: 59 GKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLC 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLAD CTGLQGFLVF++ GGG
Sbjct: 119 LDRIRKLADNCTGLQGFLVFNAVGGG 144
Score = 128 bits (308), Expect = 3e-30
Identities = 52/59 (88%), Positives = 58/59 (98%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQ DGQMPSD+T+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAG 59
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 159 bits (387), Expect = 9e-40
Identities = 69/86 (80%), Positives = 81/86 (94%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G+E+VD+
Sbjct: 119 GKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLC 178
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLAD CTGLQGFLVF++ GGG
Sbjct: 179 LDRLRKLADNCTGLQGFLVFNAVGGG 204
Score = 81.8 bits (193), Expect = 3e-16
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSD 193
MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 188 SDKTLGGGDDSFNTFFSETGAG 253
SD T G D+FNTFFSET +G
Sbjct: 98 SDTTPGIARDAFNTFFSETSSG 119
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 109 bits (261), Expect = 2e-24
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 237 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 296
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 297 LDVVRKEAENCDCLQGFQVCHSLGGG 322
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 59 RKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFS 238
+K KMRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 239 ETGAG 253
E G
Sbjct: 233 EASCG 237
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 109 bits (261), Expect = 2e-24
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGG 142
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDL--QLERVNVYYNEASCG 57
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 108 bits (260), Expect = 2e-24
Identities = 47/86 (54%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGG 142
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGG 57
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 107 bits (256), Expect = 7e-24
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGG 142
Score = 44.0 bits (99), Expect = 7e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHG+ G+ D L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGG 57
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 106 bits (254), Expect = 1e-23
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGG 142
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCG 57
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 105 bits (253), Expect = 2e-23
Identities = 46/86 (53%), Positives = 61/86 (70%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF V HS GGG
Sbjct: 117 LDVVRKEAENCDCLQGFQVCHSLGGG 142
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHGI G+ D L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGG 57
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQG 477
LD +RK A+ C LQG
Sbjct: 117 LDVVRKEAENCDCLQG 132
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHGI P G+ + L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCG 57
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/84 (46%), Positives = 54/84 (64%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFG 501
LD +RK A+ C LQ V G
Sbjct: 117 LDVVRKEAENCDCLQDNRVIRQLG 140
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGG 57
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 70.5 bits (165), Expect = 7e-13
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDVV 429
++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 60 YIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDI 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
+D I + AD L+GF++ HS GG
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIAGG 144
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 80 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFF 235
RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/68 (33%), Positives = 26/68 (38%)
Frame = +2
Query: 59 RKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFS 238
R +Y + C VHI Y E G PD D +GGG FN F S
Sbjct: 406 RVFNYTLDPCGPVHISVGDGGNREKMATSYADEPGRCPDPLSTPDPFMGGGFCGFN-FTS 464
Query: 239 ETGAGSTC 262
AGS C
Sbjct: 465 GPAAGSFC 472
>01_03_0230 -
14004159-14004344,14004422-14004514,14004613-14004673,
14004761-14004874,14004955-14005206,14005293-14007037
Length = 816
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 334 TVDGKCRYEPRRLQLVPNQQRQLVARASRAGLAEERVKGVVSTAEG 197
T +GK +E LQ V N+ L + + +R K V+STA G
Sbjct: 114 TDEGKVSFEDPELQSVANKMENLSSSQKKGFFKPKRKKDVLSTALG 159
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 216 SSPPPRVLSDGI*PSGWIPCSRQYSSQ 136
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 176 GQMPSDKTLGGGDDSFNTFF 235
GQMPS LGG FNT+F
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 12 RLGRAQTLFSSKSFI*ENLLTK*GNASPFTSVKPAYRLATPAGSCTASS 158
R G +F+S S + LT NA P ++ P+ RLA P SC+A++
Sbjct: 101 RTGSGPLIFTSCSSSATSPLT---NALPAGNICPSGRLAKPLSSCSAAA 146
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 249 APVSLKNVLKESSPPPRVLSDGI*PSGWIPCSRQYSSQQALPI 121
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>10_08_0005 +
14030414-14030519,14030612-14030921,14031012-14031233,
14031326-14031565,14031727-14031804,14031841-14032036,
14032084-14032265,14032351-14032433,14032526-14032650,
14032762-14032840,14032924-14033092,14033171-14033231,
14033312-14033434,14033552-14033749,14033927-14033995,
14034244-14034320,14034475-14034562
Length = 801
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 315 GTNLVDYSW--FQINKDSSWHVLPAPVSLK 232
GTNL+D+ W F I D V+P+P K
Sbjct: 68 GTNLLDFQWSPFPIQMDGVSAVVPSPSGSK 97
>07_03_0686 + 20697493-20697927
Length = 144
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 262 PRAVFVDLEPTVV-DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 417
P+ F LEP+V+ DE T + + E L++GKE+ + + +G+E+
Sbjct: 5 PKDDFDFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEEL 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,797,313
Number of Sequences: 37544
Number of extensions: 364357
Number of successful extensions: 1158
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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