Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00058
(508 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 185 2e-47
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 184 3e-47
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 184 4e-47
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 182 1e-46
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 3e-46
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 2e-45
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 6e-45
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 7e-45
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 6e-41
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 2e-36
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 145 2e-35
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 139 1e-33
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 134 3e-32
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 6e-31
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 108 2e-24
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 108 3e-24
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 107 4e-24
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 105 3e-23
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 8e-23
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 91 4e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 89 3e-18
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 60 1e-09
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 1e-06
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 46 1e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.002
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.14
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 32 0.24
SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.2
SB_6678| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-10) 29 2.9
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 28 3.8
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_27025| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-28) 27 6.7
SB_36800| Best HMM Match : DUF1324 (HMM E-Value=3.9) 27 8.9
SB_4763| Best HMM Match : LRR_1 (HMM E-Value=4.9e-05) 27 8.9
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 27 8.9
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 185 bits (450), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD+V
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGG 208
Score = 183 bits (446), Expect = 7e-47
Identities = 81/86 (94%), Positives = 86/86 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+V
Sbjct: 644 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 703
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 704 LDRIRKLADQCTGLQGFLIFHSFGGG 729
Score = 132 bits (320), Expect = 1e-31
Identities = 56/58 (96%), Positives = 58/58 (100%)
Frame = +2
Query: 80 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
RECISVH+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 123
Score = 132 bits (320), Expect = 1e-31
Identities = 55/59 (93%), Positives = 59/59 (100%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
+RECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 644
Score = 132 bits (319), Expect = 2e-31
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +2
Query: 80 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
RECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 571
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTV 297
GKHVPRAVFVDLEPTV
Sbjct: 571 GKHVPRAVFVDLEPTV 586
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 184 bits (449), Expect = 3e-47
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIVD+V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 552 LDRIRKLADQCTGLQGFLIFHSFGGG 577
Score = 184 bits (448), Expect = 4e-47
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIVD+V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLV 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 119 LDRIRKLADQCTGLQGFLIFHSFGGG 144
Score = 135 bits (326), Expect = 2e-32
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = +2
Query: 62 KSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 241
+ Y+ RECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSE
Sbjct: 429 EKDYEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 488
Query: 242 TGAG 253
TGAG
Sbjct: 489 TGAG 492
Score = 134 bits (324), Expect = 4e-32
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 59
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 184 bits (448), Expect = 4e-47
Identities = 82/86 (95%), Positives = 86/86 (100%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+D+V
Sbjct: 58 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV 117
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 118 LDRIRKLADQCTGLQGFLIFHSFGGG 143
Score = 132 bits (319), Expect = 2e-31
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +2
Query: 80 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
RECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 58
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 182 bits (444), Expect = 1e-46
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+D+V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR RKLADQCTGLQGFL+FHSFGGG
Sbjct: 119 LDRCRKLADQCTGLQGFLIFHSFGGG 144
Score = 133 bits (321), Expect = 9e-32
Identities = 55/59 (93%), Positives = 59/59 (100%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECIS+H+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 59
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 181 bits (441), Expect = 3e-46
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 923 LDRIRKLADQCTGLQGFLIFHSFGGG 948
Score = 178 bits (433), Expect = 2e-45
Identities = 78/86 (90%), Positives = 84/86 (97%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE +D+V
Sbjct: 430 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIV 489
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLAD CTGLQGFL+FHSFGGG
Sbjct: 490 LDRLRKLADGCTGLQGFLIFHSFGGG 515
Score = 134 bits (324), Expect = 4e-32
Identities = 56/64 (87%), Positives = 61/64 (95%)
Frame = +2
Query: 62 KSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 241
+ Y+ RECISVH+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSE
Sbjct: 800 EKDYEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 859
Query: 242 TGAG 253
TGAG
Sbjct: 860 TGAG 863
Score = 130 bits (314), Expect = 6e-31
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +2
Query: 68 SYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETG 247
++ RECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+GGGDD+FNTFF+ETG
Sbjct: 369 TFWQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETG 428
Query: 248 AG 253
AG
Sbjct: 429 AG 430
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 178 bits (434), Expect = 2e-45
Identities = 77/86 (89%), Positives = 85/86 (98%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++++V
Sbjct: 44 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIV 103
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLADQCTGLQGFL+FHSFGGG
Sbjct: 104 LDRLRKLADQCTGLQGFLIFHSFGGG 129
Score = 175 bits (425), Expect = 2e-44
Identities = 77/86 (89%), Positives = 84/86 (97%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ +D V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQC+GLQGFLVFHSFGGG
Sbjct: 537 LDRIRKLADQCSGLQGFLVFHSFGGG 562
Score = 133 bits (322), Expect = 7e-32
Identities = 54/64 (84%), Positives = 61/64 (95%)
Frame = +2
Query: 62 KSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 241
+ Y+ REC+S+H+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSE
Sbjct: 414 EKDYEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSE 473
Query: 242 TGAG 253
TGAG
Sbjct: 474 TGAG 477
Score = 102 bits (245), Expect = 1e-22
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2
Query: 122 IGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETGAG
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAG 44
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 177 bits (430), Expect = 6e-45
Identities = 78/86 (90%), Positives = 83/86 (96%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D V
Sbjct: 59 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTV 118
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLAD CTGLQGFL+FHSFGGG
Sbjct: 119 LDRLRKLADGCTGLQGFLIFHSFGGG 144
Score = 132 bits (319), Expect = 2e-31
Identities = 55/59 (93%), Positives = 59/59 (100%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECISVH+GQAGVQ+GNACWELYCLEHGIQPDGQMPSDKT+GGGDDSFNTFFSETG+G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSG 59
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 176 bits (429), Expect = 7e-45
Identities = 76/86 (88%), Positives = 84/86 (97%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +D+
Sbjct: 24 GKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLA 83
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDRIRKLADQCTGLQGFL+FHSFGGG
Sbjct: 84 LDRIRKLADQCTGLQGFLIFHSFGGG 109
Score = 54.0 bits (124), Expect = 7e-08
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = +2
Query: 182 MPSDKTLGGGDDSFNTFFSETGAG 253
MPSDKT+GGGDDSFNTFF+ETGAG
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAG 24
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 163 bits (397), Expect = 6e-41
Identities = 70/86 (81%), Positives = 82/86 (95%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V+VV
Sbjct: 970 GKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVV 1029
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
+D+IRK+ DQC+GLQGFL+FHSFGGG
Sbjct: 1030 MDKIRKMTDQCSGLQGFLIFHSFGGG 1055
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 148 bits (359), Expect = 2e-36
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +1
Query: 295 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQ 474
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 475 GFLVFHSFGGG 507
GFL+FHSFGGG
Sbjct: 71 GFLIFHSFGGG 81
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 145 bits (352), Expect = 2e-35
Identities = 63/68 (92%), Positives = 68/68 (100%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFL 483
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 484 VFHSFGGG 507
+FHSFGGG
Sbjct: 62 IFHSFGGG 69
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 139 bits (336), Expect = 1e-33
Identities = 59/68 (86%), Positives = 66/68 (97%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFL 483
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +D+ LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 484 VFHSFGGG 507
+FHSFGGG
Sbjct: 62 IFHSFGGG 69
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 134 bits (325), Expect = 3e-32
Identities = 66/86 (76%), Positives = 70/86 (81%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GKHVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ VD V
Sbjct: 59 GKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQV 108
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LDR+RKLADQC+GLQGF +FHSFGGG
Sbjct: 109 LDRLRKLADQCSGLQGFFIFHSFGGG 134
Score = 132 bits (320), Expect = 1e-31
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECIS+H+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT GGGDDSFNTFFSETGAG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAG 59
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 130 bits (314), Expect = 6e-31
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRECISVH+GQAGVQIGNACWELYCLEHGIQPDGQMPSDKT+ GGDDSFNTFFSETG G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGG 59
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVR 312
GKHVPRAVFVDLEP+VV ++
Sbjct: 59 GKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 112 bits (269), Expect = 2e-25
Identities = 48/66 (72%), Positives = 55/66 (83%)
Frame = +2
Query: 56 LRKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFF 235
L S MREC+S+H+GQAGVQIGNACWELYCLEHGIQPDG MPSD++ DDSF+TFF
Sbjct: 189 LNCSIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFF 248
Query: 236 SETGAG 253
SET +G
Sbjct: 249 SETASG 254
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 445 KLADQCTGLQGFLVFHSFGGG 507
K ADQCTGLQGFLVFHSFGGG
Sbjct: 255 KHADQCTGLQGFLVFHSFGGG 275
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 108 bits (260), Expect = 2e-24
Identities = 48/86 (55%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 329
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF + HS GGG
Sbjct: 330 LDVVRKEAESCDCLQGFQLTHSLGGG 355
Score = 48.4 bits (110), Expect = 3e-06
Identities = 26/68 (38%), Positives = 33/68 (48%)
Frame = +2
Query: 50 VYLRKSSYKMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNT 229
VY K +KMRE + GQ G QIG WE+ EHGI P G D L + N
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINV 262
Query: 230 FFSETGAG 253
+++E G
Sbjct: 263 YYNEATGG 270
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 108 bits (259), Expect = 3e-24
Identities = 47/86 (54%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C LQGF + HS GGG
Sbjct: 117 LDVVRKEAESCDCLQGFQLTHSLGGG 142
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + GQ G QIG WE+ EHGI P G D L + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGG 57
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 107 bits (258), Expect = 4e-24
Identities = 47/86 (54%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C +QGF + HS GGG
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGG 87
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 105 bits (251), Expect = 3e-23
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
GK+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSV 116
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +RK A+ C +QGF + HS GGG
Sbjct: 117 LDVVRKEAESCDCIQGFQLTHSLGGG 142
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE +S+ GQ G QIG WE+ EHGI P G D L + N +++E G
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGG 57
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 103 bits (247), Expect = 8e-23
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKL 450
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++D+VLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 91.5 bits (217), Expect = 4e-19
Identities = 39/49 (79%), Positives = 45/49 (91%)
Frame = +1
Query: 304 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKL 450
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +D+ L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 88.6 bits (210), Expect = 3e-18
Identities = 36/86 (41%), Positives = 56/86 (65%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
D +RK A+ C +QG + + GGG
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGG 98
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 361 KEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGG 507
+ AANN+A+G YT G E++D +D IRKLA+ C +QGF + HS GGG
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGG 50
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 265 RAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVV 429
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G + +D V
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKV 124
Query: 430 LDRIRKLADQCTGLQGFLVFHSFGGG 507
LD +++ ++C L GFL S GG
Sbjct: 125 LDLVQREVEKCDRLDGFLTLLSLAGG 150
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 47.6 bits (108), Expect = 6e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 250 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 354
GK+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +2
Query: 77 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAG 253
MRE + GQ G QIG WE+ EHGI P G D L + N +++E G
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGG 57
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1
Query: 451 ADQCTGLQGFLVFHSFGGG 507
ADQCTGLQGFL+FHSFGGG
Sbjct: 1 ADQCTGLQGFLIFHSFGGG 19
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 265 RAVFVDLEPTVVDEVRT--GTYRQLFHPEQLITGKEDAANNYARGHY--TI---GKEIVD 423
R V VD E V+ R G + Q +I G+ NN+A G++ +I G ++
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 424 VVLDRIRKLADQCTGLQGFLVFHSFGGG 507
+ +D +RK ++C G +V HS GG
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGG 126
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 265 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 384
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 439 IRKLADQCTGLQGFLVFHSFGGG 507
+RK A+ C +QGF + HS GGG
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGG 23
>SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 366 LFASDELLGVEQLTVSAGTNLV 301
LFASD+LL VE+L VS+ NL+
Sbjct: 11 LFASDKLLRVEKLAVSSSANLI 32
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 137 WELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSE 241
WE+ EHGI PDGQ + ++ D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQCTAVQS-KIQTDRLNVYFDE 35
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 262 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 411
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_6678| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-10)
Length = 371
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 294 SWFQINKDSSWHVLPAPVSLKNVL 223
S F +N D W LPAP+ L N++
Sbjct: 169 SLFALNSDRYWTFLPAPILLINII 192
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 80 RECISVHIGQAGVQIGNACWELYCLEHGIQPDG-QMPSD 193
+ C S I +GV+ G W L + GIQP PSD
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSD 275
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 5.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 277 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLAD 456
V +E TV DE G YR E ITGK + + YTI K ++ + ++ D
Sbjct: 39 VRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDKGDKHTLVIKSIEVKD 94
Query: 457 ----QCTGLQGFLVFHSF 498
+C G + +FH F
Sbjct: 95 GGYYKCKGAKTSKLFHLF 112
>SB_27025| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-28)
Length = 675
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 244 GLAEERVKGVVSTAEGLI*RHLTIRLDSMLEAVQLPAGVANLYAGLTD 101
G + K V + LI HL +LDS+ V +PA N+ L D
Sbjct: 324 GFSVSEKKSVTQPTQLLI--HLGFKLDSVTMTVSIPAEKVNIIVALAD 369
>SB_36800| Best HMM Match : DUF1324 (HMM E-Value=3.9)
Length = 207
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 37 FLLSRLFKKIFLQNEGMHLRSHRSSRRTDWQRLLGAVL 150
+LL+ +F L+N + RS+R+ RRT+ ++GAV+
Sbjct: 14 YLLAYIF--FCLRNSAVSCRSYRNRRRTERFPMIGAVV 49
>SB_4763| Best HMM Match : LRR_1 (HMM E-Value=4.9e-05)
Length = 280
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 366 LFASDELLGVEQLTVSAGTNLVDYSWFQI 280
L +D+ GV+ LT+SA + Y W Q+
Sbjct: 137 LSPADDKAGVQDLTLSANPAVTPYGWTQL 165
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 285 QINKDSSWHVLPAPVSLKNVLKESSPPP 202
Q SS LP P SL + SSPPP
Sbjct: 85 QTRSSSSSQSLPPPPSLSSQTSSSSPPP 112
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,930,472
Number of Sequences: 59808
Number of extensions: 371793
Number of successful extensions: 1132
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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