Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00056
(818 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 174 1e-43
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 174 1e-43
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 174 1e-43
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 174 1e-43
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 173 3e-43
AE014134-1365|AAF52580.1| 197|Drosophila melanogaster CG14532-P... 33 0.62
BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p pro... 32 1.1
AF334032-1|AAK09434.1| 1549|Drosophila melanogaster no-mechanore... 32 1.1
AF334031-1|AAK09433.1| 1557|Drosophila melanogaster no-mechanore... 32 1.1
AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-P... 32 1.1
AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-P... 32 1.1
AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-P... 32 1.1
AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-P... 32 1.1
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 3.3
BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p pro... 29 7.6
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 174 bits (423), Expect = 1e-43
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAP
Sbjct: 123 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAP 182
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 183 RGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
Score = 162 bits (393), Expect = 6e-40
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 47 TKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTR 106
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGDNNGHIGLGVKCSKEV
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEV 130
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 174 bits (423), Expect = 1e-43
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAP
Sbjct: 123 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAP 182
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 183 RGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
Score = 162 bits (393), Expect = 6e-40
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 47 TKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTR 106
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGDNNGHIGLGVKCSKEV
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEV 130
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 174 bits (423), Expect = 1e-43
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAP
Sbjct: 123 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAP 182
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 183 RGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
Score = 162 bits (393), Expect = 6e-40
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 47 TKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTR 106
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGDNNGHIGLGVKCSKEV
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEV 130
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 174 bits (423), Expect = 1e-43
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAP
Sbjct: 123 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAP 182
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVPKKLL MAG++DCYTSARGSTGT
Sbjct: 183 RGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
Score = 162 bits (393), Expect = 6e-40
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 47 TKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTR 106
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGDNNGHIGLGVKCSKEV
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEV 130
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 173 bits (420), Expect = 3e-43
Identities = 79/93 (84%), Positives = 86/93 (92%)
Frame = +1
Query: 484 GCEVQQGSPTAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAP 663
G + + TAIRGAIILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV+VRLIPAP
Sbjct: 123 GVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAP 182
Query: 664 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 762
RGTGIVSAPVP+KLL MAG++DCYTSARGSTGT
Sbjct: 183 RGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGT 215
Score = 162 bits (393), Expect = 6e-40
Identities = 78/84 (92%), Positives = 79/84 (94%)
Frame = +2
Query: 257 TKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTR 436
TKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQRTR
Sbjct: 47 TKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTR 106
Query: 437 FKAFVAIGDNNGHIGLGVKCSKEV 508
FKAFVAIGDNNGHIGLGVKCSKEV
Sbjct: 107 FKAFVAIGDNNGHIGLGVKCSKEV 130
>AE014134-1365|AAF52580.1| 197|Drosophila melanogaster CG14532-PA
protein.
Length = 197
Score = 32.7 bits (71), Expect = 0.62
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 446 FVAIGDNNGHIGLGVKCSKEVPLPFEALLSLLSCLFYQFEEVTGVTR--SESHTPSLARS 619
F +G H +G+ C + +PLPF + + + F + S SH PSL
Sbjct: 105 FAVVGVAPIHDSVGLHCQRRLPLPFAVSIGISASTFTSNSIAIAIATAISMSHVPSLMSM 164
Query: 620 PASVVL 637
+VV+
Sbjct: 165 SVAVVV 170
>BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p
protein.
Length = 1027
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AF334032-1|AAK09434.1| 1549|Drosophila melanogaster
no-mechanoreceptor potential Ashort isoform protein.
Length = 1549
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AF334031-1|AAK09433.1| 1557|Drosophila melanogaster
no-mechanoreceptor potential Along isoform protein.
Length = 1557
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-PB,
isoform B protein.
Length = 1557
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-PA,
isoform A protein.
Length = 1557
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-PD,
isoform D protein.
Length = 1549
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-PC,
isoform C protein.
Length = 1549
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR D VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDDIVHSARR 750
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 595 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 717
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p
protein.
Length = 1549
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 294 SIFPSRTRRPSLVKEPTLSGLPCRAHDHGRDHDRVHEDRR 175
SIFP R RPS + P LP GR VH RR
Sbjct: 711 SIFPDRRYRPSSMDSPRYPYLPDSRGPPGRYDGIVHSARR 750
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,212,672
Number of Sequences: 53049
Number of extensions: 875186
Number of successful extensions: 3829
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3332
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -