Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00055
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2987|AAF57490.2| 1625|Drosophila melanogaster CG8908-PA...    30   3.0  
AE013599-2986|AAM68403.2| 1665|Drosophila melanogaster CG8908-PB...    30   3.0  
X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (d...    29   6.9  
AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p pro...    29   6.9  
AL021726-1|CAA16809.1| 1002|Drosophila melanogaster EG:171E4.1,F...    29   6.9  
AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA ...    29   6.9  

>AE013599-2987|AAF57490.2| 1625|Drosophila melanogaster CG8908-PA,
           isoform A protein.
          Length = 1625

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 175 THSLAFLICFKTNASQFILATNSVLIRFMNIKLYSKFFFYL 53
           T S   LIC K +       TN + IRF +IKL+++F  Y+
Sbjct: 656 TGSSYLLICTKMDTCIVAEVTNFLQIRFPDIKLHNEFSIYV 696


>AE013599-2986|AAM68403.2| 1665|Drosophila melanogaster CG8908-PB,
           isoform B protein.
          Length = 1665

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 175 THSLAFLICFKTNASQFILATNSVLIRFMNIKLYSKFFFYL 53
           T S   LIC K +       TN + IRF +IKL+++F  Y+
Sbjct: 696 TGSSYLLICTKMDTCIVAEVTNFLQIRFPDIKLHNEFSIYV 736


>X86683-1|CAA60382.1| 1002|Drosophila melanogaster deep orange (dor)
           protein.
          Length = 1002

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 433 KHTLSIDFQDYGGTCNKNQINKFFFLVVCYDKYH 332
           +H+L+++ QD    C    + K FF+ +C  K+H
Sbjct: 874 QHSLTVESQDTCEICEMMLLVKPFFIFICGHKFH 907


>AY061592-1|AAL29140.1| 1002|Drosophila melanogaster SD04291p
           protein.
          Length = 1002

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 433 KHTLSIDFQDYGGTCNKNQINKFFFLVVCYDKYH 332
           +H+L+++ QD    C    + K FF+ +C  K+H
Sbjct: 874 QHSLTVESQDTCEICEMMLLVKPFFIFICGHKFH 907


>AL021726-1|CAA16809.1| 1002|Drosophila melanogaster
           EG:171E4.1,FBgn0000482;dor protein.
          Length = 1002

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 433 KHTLSIDFQDYGGTCNKNQINKFFFLVVCYDKYH 332
           +H+L+++ QD    C    + K FF+ +C  K+H
Sbjct: 874 QHSLTVESQDTCEICEMMLLVKPFFIFICGHKFH 907


>AE014298-240|AAF45652.1| 1002|Drosophila melanogaster CG3093-PA
           protein.
          Length = 1002

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 433 KHTLSIDFQDYGGTCNKNQINKFFFLVVCYDKYH 332
           +H+L+++ QD    C    + K FF+ +C  K+H
Sbjct: 874 QHSLTVESQDTCEICEMMLLVKPFFIFICGHKFH 907


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,908,204
Number of Sequences: 53049
Number of extensions: 564249
Number of successful extensions: 850
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)