Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00054
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35681| Best HMM Match : NIC (HMM E-Value=1e-08) 63 2e-10
SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_18213| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_58746| Best HMM Match : RA (HMM E-Value=0.85) 30 1.9
SB_35830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_32378| Best HMM Match : DUF591 (HMM E-Value=1.6) 29 2.5
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_20528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_13265| Best HMM Match : IncA (HMM E-Value=0.32) 29 2.5
SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4) 29 2.5
SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09) 29 2.5
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_18435| Best HMM Match : Beta_elim_lyase (HMM E-Value=7.1) 29 2.5
SB_17553| Best HMM Match : RecR (HMM E-Value=6.9) 29 2.5
SB_16260| Best HMM Match : Ribosomal_L12 (HMM E-Value=1.4) 29 2.5
SB_15359| Best HMM Match : Herpes_US9 (HMM E-Value=1.7) 29 2.5
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 29 3.3
SB_30815| Best HMM Match : Sas10_Utp3 (HMM E-Value=1) 29 3.3
SB_21865| Best HMM Match : DUF1010 (HMM E-Value=1.5) 29 3.3
SB_21215| Best HMM Match : DUF1279 (HMM E-Value=0.54) 29 3.3
SB_17284| Best HMM Match : IncA (HMM E-Value=0.24) 29 3.3
SB_22122| Best HMM Match : LACT (HMM E-Value=0.15) 29 3.3
SB_28666| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.7
SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_22493| Best HMM Match : Toxin_28 (HMM E-Value=8.6) 28 5.7
SB_55226| Best HMM Match : Cofilin_ADF (HMM E-Value=4.7e-14) 28 7.6
SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5) 28 7.6
SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_22296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_45530| Best HMM Match : DnaB_C (HMM E-Value=0.89) 28 7.6
SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59) 28 7.6
>SB_35681| Best HMM Match : NIC (HMM E-Value=1e-08)
Length = 333
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +3
Query: 252 KAVYCVIGCCDVSDEHYEVARTADDYLWLKLSFIRTRSANETESFSYSDLQKLILEEYGE 431
+AVYC++G CD++D H E+A +DYLWLKLS + ++ + + LQ L+LE++
Sbjct: 113 RAVYCLVGHCDLADNHQELATKTEDYLWLKLSLVSVDQSDAQDEMTLDQLQILLLEQFVT 172
Query: 432 T 434
T
Sbjct: 173 T 173
>SB_34751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 215 YWKFMAVCSLSLSGFSGFRIYSSKAAMNSS*SRPAFLKQCNAAFGSPLL 69
Y+ A +S+ + + ++SKA + +S SR F+K C AAF P +
Sbjct: 899 YFLLAAFAWMSVMAYDVMKTFASKAVLQASNSRKTFIKYCCAAFTFPAI 947
>SB_18213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2
Query: 509 EFLSRIPRYQVHGVHMALALHDVYMLGTPRNVQAPL 616
EFLSR+ ++ H VH+A++L+++ +L ++Q L
Sbjct: 3 EFLSRVEFFRSHAVHIAISLYEMGLLAVSESLQTQL 38
>SB_58746| Best HMM Match : RA (HMM E-Value=0.85)
Length = 820
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 682 CLSLGEPSNVLACLESRGRPHEKVV 706
>SB_35830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 507 CLSLGEPSNVLACLETRGRPHEKVV 531
>SB_32378| Best HMM Match : DUF591 (HMM E-Value=1.6)
Length = 457
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 329 CLSLGEPSNVLACLETRGRPHEKVV 353
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 188 CLSLGEPSNVLACLETRGRPHEKVV 212
>SB_20528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 637
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 155 CLSLGEPSNVLACLETRGRPHEKVV 179
>SB_13265| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 339
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 99 CLALGEPSNVLACLETRGRPHEKVV 123
>SB_13012| Best HMM Match : TrbC (HMM E-Value=1.4)
Length = 367
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 155 CLSLGEPSNVLACLETRGRPHEKVV 179
>SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09)
Length = 416
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 70 CLALGEPSNVLACLETRGRPHEKVV 94
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 344 CLSLGEPSNVLACLETRGRPHEKVV 368
>SB_18435| Best HMM Match : Beta_elim_lyase (HMM E-Value=7.1)
Length = 275
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 148 CLSLGEPSNVLACLETRGRPHEKVV 172
>SB_17553| Best HMM Match : RecR (HMM E-Value=6.9)
Length = 151
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 95 CLSLGEPSNVLACLETRGRPHEKVV 119
>SB_16260| Best HMM Match : Ribosomal_L12 (HMM E-Value=1.4)
Length = 341
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 155 CLSLGEPSNVLACLETRGRPHEKVV 179
>SB_15359| Best HMM Match : Herpes_US9 (HMM E-Value=1.7)
Length = 259
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL S +P+ L CL GR HE+ +
Sbjct: 93 CLASDEPSNVLACLETRGRPHEKIV 117
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 348 FIRTRSANETESFSYSDLQKLILEEYGETHYHAY 449
F++T+S E E + K+ LE + HYH+Y
Sbjct: 1296 FVKTKSLTEIEKTFTGNGHKMQLETFPPGHYHSY 1329
>SB_30815| Best HMM Match : Sas10_Utp3 (HMM E-Value=1)
Length = 864
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLS 183
CL +P+ L CL GR HE+ + + + + PLS
Sbjct: 679 CLALDEPSTVLACLETRGRAHEKVVYGPDIPVLSQRLPLS 718
>SB_21865| Best HMM Match : DUF1010 (HMM E-Value=1.5)
Length = 359
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 546 VFIWLLRYMTFTCWAHRGMFKLHSCLWTQKIHH 644
VF+WL + + W R F+L++ L KI H
Sbjct: 323 VFLWLCEEVESSIWLLRQSFRLNAALICSKIRH 355
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 546 VFIWLLRYMTFTCWAHRGMFKLHSCLWTQKIHH 644
VF+WL + + W R F+L++ L KI H
Sbjct: 183 VFLWLCEEVKSSIWLLRQSFRLNAALICIKIRH 215
>SB_21215| Best HMM Match : DUF1279 (HMM E-Value=0.54)
Length = 756
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFIAALEEYIRNPEKPLS 183
CL +P+ L CL GR HE+ + + + + PLS
Sbjct: 539 CLALDEPSTVLACLETRGRAHEKVVYGPDIPVLSQRLPLS 578
>SB_17284| Best HMM Match : IncA (HMM E-Value=0.24)
Length = 416
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P+ L CL GR HE+ +
Sbjct: 155 CLSLGEPSNVLACLETRGRPHEKAV 179
>SB_22122| Best HMM Match : LACT (HMM E-Value=0.15)
Length = 188
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 10 GFTDGVIDERPLWPMVYYCLRSGDPNAALHCLRKAGRDHEE 132
G+ DG+ R L + L+ PN LHCL +G D EE
Sbjct: 76 GYPDGIPVRRNLENLTAPLLQHA-PNVTLHCLHGSGVDTEE 115
>SB_28666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 527 PRYQVHGVHMALALHDVYMLGTPRNVQAPLLSVDTED 637
PRY+ HG H +++L Y L TP +A ++ V + D
Sbjct: 3 PRYKEHGTHFSISLLRHYRL-TPYKSRAKMVDVLSAD 38
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 641 VDLLCPQTGVELEHSSVCPACKRHVTQE 558
VD Q + ++H C AC HV +E
Sbjct: 984 VDSCAEQKEISVKHKGACDACSNHVCEE 1011
>SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 882
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 487 LDSLSQL*IPLENTKISSTRCSYGSCVT*RLHAGHTEE 600
++S+S+L P EN +S RC YG+ + R G+ E
Sbjct: 649 MESVSELRCPYEN--VSELRCPYGNVIELRCPFGNVSE 684
>SB_22493| Best HMM Match : Toxin_28 (HMM E-Value=8.6)
Length = 208
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL DP+ L CL GR HE+ +
Sbjct: 155 CLALDDPSNVLACLETRGRPHEKVV 179
>SB_55226| Best HMM Match : Cofilin_ADF (HMM E-Value=4.7e-14)
Length = 141
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +1
Query: 100 CLRKAGRDHEEFIAALEEYIR---NPEKPLSDKLQTAINFQYRIQVRNSTDPYKR 255
CL K+G++++EF+A +E R D+L F + V S P K+
Sbjct: 37 CLHKSGKEYDEFLAEFDESDRAYAYVRIETGDELSRRAKFAFITWVGPSVSPLKK 91
>SB_30655| Best HMM Match : DUF1279 (HMM E-Value=0.5)
Length = 692
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P L CL GR HE+ +
Sbjct: 509 CLSLGEPFNVLACLETRGRPHEKVV 533
>SB_26622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P L CL GR HE+ +
Sbjct: 450 CLSLGEPFNVLACLETRGRPHEKVV 474
>SB_22296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
CL G+P L CL GR HE+ +
Sbjct: 410 CLSLGEPLNVLACLETRGRPHEKVV 434
>SB_45530| Best HMM Match : DnaB_C (HMM E-Value=0.89)
Length = 396
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
C G+P+ L CL GR HE+ +
Sbjct: 155 CFSLGEPSNVLACLETRGRPHEKVV 179
>SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59)
Length = 483
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 64 CLRSGDPNAALHCLRKAGRDHEEFI 138
C G+P+ L CL GR HE+ +
Sbjct: 86 CFALGEPSNVLACLETRGRPHEKVV 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,847,596
Number of Sequences: 59808
Number of extensions: 416335
Number of successful extensions: 1540
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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