Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00053
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 148 6e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 147 1e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 116 2e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 81 1e-16
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 71 1e-13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 67 1e-12
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 59 4e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 58 8e-10
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 30 0.26
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.34
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 27 1.4
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 2.4
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 26 3.2
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 26 4.2
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 5.5
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 5.5
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 7.3
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 25 9.6
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 9.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 148 bits (358), Expect = 6e-37
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTS
Sbjct: 235 LVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTS 294
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
ITRARFEEL ADLFR TMEPVE+
Sbjct: 295 ITRARFEELCADLFRKTMEPVER 317
Score = 104 bits (249), Expect = 1e-23
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = +2
Query: 251 VFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXI 430
V RD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE SINPDE +
Sbjct: 318 VLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAV 377
Query: 431 LHGDKSEEVQDLLLLDVTPLS 493
L GD SE+ QDLLLLDV PLS
Sbjct: 378 LTGDTSEKTQDLLLLDVAPLS 398
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 510 GGVMTTLIKRNT 545
GGVMT LIKRNT
Sbjct: 405 GGVMTPLIKRNT 416
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 147 bits (356), Expect = 1e-36
Identities = 71/83 (85%), Positives = 76/83 (91%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTS
Sbjct: 235 LVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTS 294
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
ITRARFEEL ADLFR+TMEPVEK
Sbjct: 295 ITRARFEELCADLFRNTMEPVEK 317
Score = 103 bits (246), Expect = 2e-23
Identities = 50/82 (60%), Positives = 61/82 (74%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V RD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE SINPDE
Sbjct: 317 KVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAA 376
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
IL GD SE+ QDLLLLDV PLS
Sbjct: 377 ILVGDTSEKTQDLLLLDVAPLS 398
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 510 GGVMTTLIKRNT 545
GGVMT LIKRNT
Sbjct: 405 GGVMTPLIKRNT 416
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 116 bits (280), Expect = 2e-27
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +S
Sbjct: 239 LVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSS 298
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
ITRARFE++NA F++T++PV K
Sbjct: 299 ITRARFEDINATTFKATIDPVAK 321
Score = 95.1 bits (226), Expect = 6e-21
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V +D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LN SINPDE
Sbjct: 321 KVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAA 380
Query: 428 IL-HGDKSEEVQDLLLLDVTPLS 493
+L + S++ QDLLLLDV PLS
Sbjct: 381 VLTNKADSDKTQDLLLLDVVPLS 403
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 81.0 bits (191), Expect = 1e-16
Identities = 35/83 (42%), Positives = 57/83 (68%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++N+ + + RK D+ + +A+ +L+ E+AKRTLSS IEI+S F G DF +
Sbjct: 267 VINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSET 326
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
++RA+FEE+N DLF+ T++PVE+
Sbjct: 327 LSRAKFEEINMDLFKKTLKPVEQ 349
Score = 75.4 bits (177), Expect = 5e-15
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V +D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ + INPDE
Sbjct: 349 QVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAG 407
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G++ + +++LLDV PL+
Sbjct: 408 VLSGEEGSD--NIVLLDVIPLT 427
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 70.5 bits (165), Expect = 1e-13
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+VN F +EF++K D N R+L +LR CE KR LS+ T AS +DSL +GIDF++S
Sbjct: 261 LVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSS 320
Query: 183 ITRARFE-ELNADLFRS---TMEPVEKSSVMP 266
I R R++ +A L R E VEK+++ P
Sbjct: 321 INRLRYDLAASATLNRMADLVTEAVEKANMEP 352
Score = 30.3 bits (65), Expect = 0.19
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 355
E A M+ I +++L GG++ PK+ L++ F
Sbjct: 343 EAVEKANMEPFDISEVILAGGASNTPKLTSLMESIF 378
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 67.3 bits (157), Expect = 1e-12
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++++F EFK KYK D+ +N +A RL TA ER K+ LS++ A + ++ + ID +
Sbjct: 243 LIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSF 302
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
I R+ FEEL L P+EK+
Sbjct: 303 IKRSDFEELIKPLLERLTPPIEKA 326
Score = 38.3 bits (85), Expect = 7e-04
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +2
Query: 263 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 330 AGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 59.3 bits (137), Expect = 4e-10
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +2
Query: 257 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILH 436
+DA + ++I++++LVGG TR+P+V + ++ F +E S+NPDE +L
Sbjct: 368 KDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLS 426
Query: 437 GDKSEEVQDLLLLDVTPLS 493
G V+DL+LLDVTPLS
Sbjct: 427 G----HVKDLVLLDVTPLS 441
Score = 48.8 bits (111), Expect = 5e-07
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI----D 170
+V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++ I + +
Sbjct: 279 LVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKH 338
Query: 171 FYTSITRARFEELNADLFRSTMEPVEKS 254
I+RA+FE+L L R T++P +++
Sbjct: 339 INMEISRAQFEKLVDPLVRRTIDPCKRA 366
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 58.0 bits (134), Expect = 8e-10
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ F +K+ DL+ N RAL RL R K LS++++A I+ L +GIDF
Sbjct: 271 LIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLK 330
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITR+ E L D+ + +EP+ K+
Sbjct: 331 ITRSVLESLCKDMEDAAVEPINKA 354
Score = 41.1 bits (92), Expect = 1e-04
Identities = 23/87 (26%), Positives = 45/87 (51%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+ + A + ++I+ I+L GG++RIP +Q L D+ + +++ ++N DE
Sbjct: 353 KALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADEASVKGAAFYGA 412
Query: 428 ILHGDKSEEVQDLLLLDVTPLSSVLRL 508
L KS V+ L++ D+ +L L
Sbjct: 413 SL--TKSFRVKPLIVQDIINYPYLLSL 437
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.9 bits (64), Expect = 0.26
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = -3
Query: 475 KQQQILHLLR-LVTVQDSSLDSCTISYG-LVRVNRXV--ELLSIKEILQELLHLGDTSGA 308
K QQ+L LL LV D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 307 THQYNIVDLSLIHLGITED 251
+ I D SL+ L T D
Sbjct: 992 NLETTIEDTSLVKLETTGD 1010
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.34
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 37 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 162
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 27.5 bits (58), Expect = 1.4
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 114 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSSVMPRWIRLKS-- 287
+S + + + L G F ++T E ++ + R+ + PV + + PR + S
Sbjct: 106 MSEPREVTTIVKDLNNGDSFVLNVT----EPVDPEFLRANIPPVHRKHLPPRLSLVASPG 161
Query: 288 -------TILYWWVAPLVSPRCRSSCKISLMERSS 371
+L W+ PL+S RC+ + L + S
Sbjct: 162 TIPTRGVVVLEDWINPLLSERCKLLLQSELCNQDS 196
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 521 HDTSTVSIPRKGVLHQATADPAPPQTCHRA 432
+DTS ++P LHQ+T P +T RA
Sbjct: 294 NDTSFTNVPTSSPLHQSTTANHPEKTPSRA 323
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 206 AERRSVQVYHGASGEVFRDAKMDKAQIHD 292
A ++ + + G +F+D K+ K+Q+HD
Sbjct: 460 AYKQELNSFQGELSSLFKDLKLVKSQLHD 488
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 4.2
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 221 VQVYHGASGEVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPD 391
VQV+ G SG R +D G S RIP + +L FNG L P+
Sbjct: 73 VQVFEGTSGVDVRKTTID--------FTGHSMRIPVSEDMLGRVFNGSGLPIDKGPN 121
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASI 140
+++ F EFK++ K D + L+ L + C R R SS SI
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI 756
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 313 GATHQYNIVDLSLIHLGITEDFSTGSMVDLNR-SAFSSSKRA 191
G+ + ++D+S+ LG+T S S VD+ + +FSS ++A
Sbjct: 634 GSKTETALLDMSVKELGLTNVDSMRSSVDIKQFFSFSSDRKA 675
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 147 LSQCSLVWTMTRSSLPSHMQYANA 76
+S C ++WTM+ P HM A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 294 LYWWVAPLVSPRCRSSCKISLMERSSTNLL 383
LYW V C+S IS + SST+LL
Sbjct: 540 LYWDVQAAKDVDCKSVVDISQLRVSSTSLL 569
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 201 EELNADLFRSTMEPVEKSSVMPRWIRLKSTILYWWVAPLVSPRCRSS 341
EE++ DL V+ + RW LK L ++ PL P +S+
Sbjct: 457 EEMDLDLKSDERFKVDIPTFFERWPFLKDLPLKGYLFPLCEPNLQSA 503
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,230,451
Number of Sequences: 5004
Number of extensions: 41745
Number of successful extensions: 164
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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