Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00053
(546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 150 8e-37
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 139 1e-33
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 93 1e-19
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 71 5e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 5e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 57 1e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 49 3e-06
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 1.9
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4) 28 4.3
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 4.3
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 4.3
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 7.6
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 150 bits (363), Expect = 8e-37
Identities = 70/84 (83%), Positives = 79/84 (94%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
MV+HFV++FK+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS
Sbjct: 237 MVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 296
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEELN DLF+ T EPVE++
Sbjct: 297 ITRARFEELNQDLFKKTTEPVEQA 320
Score = 104 bits (250), Expect = 4e-23
Identities = 52/84 (61%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = +2
Query: 248 EVFRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXX 421
+ RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELN SINPDE
Sbjct: 319 QAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQ 378
Query: 422 XXILHGDKSEEVQDLLLLDVTPLS 493
ILHGDK + V+DLLLLDV PLS
Sbjct: 379 AAILHGDKDDTVKDLLLLDVAPLS 402
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 146 bits (353), Expect = 1e-35
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
MV+ FV++FK+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTS
Sbjct: 330 MVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTS 389
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEE+NA LF+ T+EPVEK+
Sbjct: 390 ITRARFEEMNAHLFKKTLEPVEKA 413
Score = 104 bits (250), Expect = 4e-23
Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 EVFRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXX 424
+ +D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELN SINPDE
Sbjct: 412 KAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQA 471
Query: 425 XILHGDKSEEVQDLLLLDVTPLS 493
ILHGDKSE QDLLLLDV PL+
Sbjct: 472 AILHGDKSEATQDLLLLDVAPLT 494
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 139 bits (337), Expect = 1e-33
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+VNHFV EFKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT
Sbjct: 238 LVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTK 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
I+RARFE+L +DLF S ++PV K+
Sbjct: 298 ISRARFEDLCSDLFLSCLDPVNKA 321
Score = 103 bits (246), Expect = 1e-22
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +2
Query: 260 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILHG 439
DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LN SINPDE IL G
Sbjct: 324 DAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSG 383
Query: 440 DKSEEVQDLLLLDVTPLS 493
DKS+EV+D+LL+DV PLS
Sbjct: 384 DKSDEVKDVLLVDVAPLS 401
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/83 (50%), Positives = 63/83 (75%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ HF++ +K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF
Sbjct: 934 VMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEM 993
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
+TRARFEELNA LF+ST++PV+K
Sbjct: 994 LTRARFEELNAKLFKSTLKPVQK 1016
Score = 83.8 bits (198), Expect = 8e-17
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE + INPDE
Sbjct: 1016 KVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAG 1075
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G+ E+ +++LLDV PL+
Sbjct: 1076 VLGGE--EDTGEVVLLDVNPLT 1095
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +2
Query: 236 GASGEVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXX 415
G + +DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ + ++NPDE
Sbjct: 71 GPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAA 129
Query: 416 XXXXILHGDKSEEVQDLLLLDVTPLS 493
+L GD V+D+LLLDVTPLS
Sbjct: 130 IQGGVLAGD----VKDVLLLDVTPLS 151
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/86 (44%), Positives = 56/86 (65%)
Frame = +2
Query: 236 GASGEVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXX 415
G + +DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ + ++NPDE
Sbjct: 126 GPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAA 184
Query: 416 XXXXILHGDKSEEVQDLLLLDVTPLS 493
+L GD V+D+LLLDVTPLS
Sbjct: 185 IQGGVLAGD----VKDVLLLDVTPLS 206
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID---- 170
++ + EFK++ DL+ + AL+RLR A E+AK LSSS Q I + +
Sbjct: 44 LLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKH 103
Query: 171 FYTSITRARFEELNADLFRSTMEPVEK 251
++R++FE L ADL T+ P +K
Sbjct: 104 LNMKLSRSKFESLVADLINRTVGPCKK 130
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYT 179
+V HF QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D +
Sbjct: 297 LVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHG 356
Query: 180 SITRARFEELNADLFRSTMEPVEKS 254
+ RA+FEEL ADL + P+ +
Sbjct: 357 RMKRAQFEELAADLLKLVEAPLRSA 381
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 56.8 bits (131), Expect = 1e-08
Identities = 21/47 (44%), Positives = 38/47 (80%)
Frame = +2
Query: 251 VFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPD 391
V + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 353 VLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/87 (28%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 VNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI--DSLFEG---ID 170
+ + +Q +++ + L T ++RLR E AK L+ + + +I++ SL EG +
Sbjct: 267 MQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVK 325
Query: 171 FYTSITRARFEELNADLFRSTMEPVEK 251
F +I+R FE +N DLF+ ++P+ +
Sbjct: 326 FKETISRKMFETINEDLFKKVLQPIRR 352
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF
Sbjct: 221 DHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVK 280
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
+TR EE+ DLF PV ++
Sbjct: 281 VTREELEEMCQDLFDRVAGPVNRA 304
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +2
Query: 236 GASGEVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
G + A M I +VLVGG R+PKVQ L EL +IN DE
Sbjct: 299 GPVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 269 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILHGDKS 448
+ ++ + ++LVGG+TR PK+Q+LL+++F GKE+ I+PDE IL G K
Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94
Query: 449 EEV 457
++
Sbjct: 95 ADM 97
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +3
Query: 36 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 191
K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 214 KWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 281 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILHGDKSEEVQ 460
+I + +VGGSTRIP ++ ++++ F GKEL ++N DE +L + V+
Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADEAVARGCALQCAML--SPTFRVR 62
Query: 461 DLLLLDVTPLSSVLRLWR 514
+ + D+TP VL W+
Sbjct: 63 EFSVNDITPYPIVL-TWK 79
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.61
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 106
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 5 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 94
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 106
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 475 KQQQILHLLR-LVTVQDSSLDSCTISYGLVRVNRXVELLSIKEILQELLHLGDTSGATHQ 299
KQ + LL ++ VQ +S D C +YG+V + L S +E L+ LHL T T Q
Sbjct: 473 KQVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLHLLQTMWETMQ 531
>SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 235
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 295 NIVDLSLIHLGITEDFSTGSMVDLNRSAFS 206
+++DLSL+ L I D T S++DL+ A S
Sbjct: 164 SLIDLSLVALSINLDVPTCSLIDLSLVALS 193
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM 94
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM 94
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 36 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 215
+++K A R + +A T+SS + +I L E + YT+ T R +++ A
Sbjct: 210 EHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYTNRTMERIDQIKA 269
Query: 216 DL 221
D+
Sbjct: 270 DM 271
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 115
LCP ++ + GP +++E AFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 14 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 115
LCP ++ + GP +++E AFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,392,406
Number of Sequences: 59808
Number of extensions: 341687
Number of successful extensions: 978
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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