Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00053
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 154 5e-38
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 149 1e-36
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 132 1e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 130 6e-31
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 95 2e-20
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 95 2e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 94 7e-20
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 67 9e-12
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 66 2e-11
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 66 2e-11
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 52 3e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 51 6e-07
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical pr... 29 2.9
Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha pro... 29 2.9
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 29 2.9
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 29 2.9
U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical pr... 28 3.8
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 27 6.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 8.8
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 154 bits (373), Expect = 5e-38
Identities = 75/84 (89%), Positives = 80/84 (95%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
MVNHF EFKRK+KKDLA+N RALRRLRTACERAKRTLSSS+QASIEIDSLFEGIDFYT+
Sbjct: 238 MVNHFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTN 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEEL ADLFRSTM+PVEKS
Sbjct: 298 ITRARFEELCADLFRSTMDPVEKS 321
Score = 119 bits (286), Expect = 2e-27
Identities = 59/79 (74%), Positives = 62/79 (78%)
Frame = +2
Query: 257 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILH 436
RDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELN SINPDE IL
Sbjct: 323 RDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILS 382
Query: 437 GDKSEEVQDLLLLDVTPLS 493
GDKSE VQDLLLLDV PLS
Sbjct: 383 GDKSEAVQDLLLLDVAPLS 401
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 149 bits (361), Expect = 1e-36
Identities = 73/84 (86%), Positives = 77/84 (91%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
MVNHF EFKRK+KKDLA+N RALRRLRTACERA TLSSS QASIEIDSLFEGIDFYT+
Sbjct: 238 MVNHFCAEFKRKHKKDLASNPRALRRLRTACERANETLSSSCQASIEIDSLFEGIDFYTN 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEEL ADLFRSTM+PVEKS
Sbjct: 298 ITRARFEELCADLFRSTMDPVEKS 321
Score = 119 bits (286), Expect = 2e-27
Identities = 59/79 (74%), Positives = 62/79 (78%)
Frame = +2
Query: 257 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILH 436
RDAKMDK+Q+HDIVLVGGSTRIPKVQKLL D F+GKELN SINPDE IL
Sbjct: 323 RDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILS 382
Query: 437 GDKSEEVQDLLLLDVTPLS 493
GDKSE VQDLLLLDV PLS
Sbjct: 383 GDKSEAVQDLLLLDVAPLS 401
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 132 bits (320), Expect = 1e-31
Identities = 60/84 (71%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ HF+ EFKRK KD+++N RA+RRLRTACERAKRTLSSST+A++E+DSLF+G DFY+
Sbjct: 238 VLQHFMTEFKRKTGKDISSNPRAIRRLRTACERAKRTLSSSTEATVEVDSLFDGTDFYSK 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEEL ADLFR T+EPVEK+
Sbjct: 298 ITRARFEELCADLFRKTLEPVEKA 321
Score = 100 bits (239), Expect = 8e-22
Identities = 46/82 (56%), Positives = 60/82 (73%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+ RDAK DK +I ++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE
Sbjct: 320 KALRDAKTDKGRIDEVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAA 379
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G K + ++D+LL+DV PLS
Sbjct: 380 VLSGVKDDTIKDVLLVDVVPLS 401
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 130 bits (314), Expect = 6e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
M+ HF+ EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+DSLFEGID T
Sbjct: 238 MLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTK 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEEL ADLFR T+EPVEK+
Sbjct: 298 ITRARFEELCADLFRKTLEPVEKA 321
Score = 105 bits (252), Expect = 2e-23
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+ RDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 320 KALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAA 379
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G K E ++D+LL+DV PLS
Sbjct: 380 VLSGVKDETIKDVLLVDVAPLS 401
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 130 bits (314), Expect = 6e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
M+ HF+ EFKRK KD++ N RA+RRLRTACERAKRTLSSS++A +E+DSLFEGID T
Sbjct: 238 MLQHFMNEFKRKTGKDISPNPRAIRRLRTACERAKRTLSSSSEACVEVDSLFEGIDLCTK 297
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
ITRARFEEL ADLFR T+EPVEK+
Sbjct: 298 ITRARFEELCADLFRKTLEPVEKA 321
Score = 105 bits (252), Expect = 2e-23
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+ RDAK+DK++I ++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE
Sbjct: 320 KALRDAKLDKSKIDEVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAA 379
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G K E ++D+LL+DV PLS
Sbjct: 380 VLSGVKDETIKDVLLVDVAPLS 401
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/83 (50%), Positives = 65/83 (78%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ +F++ +K+K KDL +KRA+++LR E+AKR LS+ Q +EI+SLF+G DF +
Sbjct: 267 VMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSET 326
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
+TRA+FEELN DLFR+T++PV+K
Sbjct: 327 LTRAKFEELNMDLFRATLKPVQK 349
Score = 81.4 bits (192), Expect = 4e-16
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE + INPDE
Sbjct: 349 KVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGG 408
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
++ G+ E+ +++LLDV PL+
Sbjct: 409 VISGE--EDTGEIVLLDVNPLT 428
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/83 (50%), Positives = 65/83 (78%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ +F++ +K+K KDL +KRA+++LR E+AKR LS+ Q +EI+SLF+G DF +
Sbjct: 267 VMEYFIKLYKKKSGKDLRKDKRAVQKLRREVEKAKRALSTQHQTKVEIESLFDGEDFSET 326
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
+TRA+FEELN DLFR+T++PV+K
Sbjct: 327 LTRAKFEELNMDLFRATLKPVQK 349
Score = 81.4 bits (192), Expect = 4e-16
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V D+ + K +H+IVLVGGSTRIPKVQ+L+++FFNGKE + INPDE
Sbjct: 349 KVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGG 408
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
++ G+ E+ +++LLDV PL+
Sbjct: 409 VISGE--EDTGEIVLLDVNPLT 428
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 93.9 bits (223), Expect = 7e-20
Identities = 42/83 (50%), Positives = 64/83 (77%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
++ +F++ +K+K KDL + RA+++LR E+AKR LS+ Q IEI+SLF+G DF +
Sbjct: 264 VMEYFIKLYKKKSGKDLRKDNRAVQKLRREVEKAKRALSTQHQTKIEIESLFDGEDFSET 323
Query: 183 ITRARFEELNADLFRSTMEPVEK 251
+TRA+FEELN DLFR+T++PV+K
Sbjct: 324 LTRAKFEELNMDLFRATLKPVQK 346
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+V DA M K +H+IVLVGGSTRIPKVQ+L++D+FNGKE + INPDE
Sbjct: 346 KVLEDADMKKTDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAG 405
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
++ G E D++LLDV PL+
Sbjct: 406 VIGG--VENTGDVVLLDVNPLT 425
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/81 (45%), Positives = 51/81 (62%)
Frame = +2
Query: 251 VFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXI 430
V DA++ +QI D++LVGG +R+PKVQ +Q+ F GK + ++NPDE +
Sbjct: 348 VLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAV 406
Query: 431 LHGDKSEEVQDLLLLDVTPLS 493
L GD V D+LLLDVTPLS
Sbjct: 407 LAGD----VTDVLLLDVTPLS 423
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID---- 170
+V+H V EFK++ DL + +A++RLR A E+AK LSS+TQ I + +
Sbjct: 261 LVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKH 320
Query: 171 FYTSITRARFEELNADLFRSTMEP 242
+TRA+FE++ DL + T+EP
Sbjct: 321 LNLKLTRAKFEQIVGDLIKRTIEP 344
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 VFRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNXSINPDEXXXXXXXXXXX 427
V R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + SI+PDE
Sbjct: 317 VIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAA 376
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G +EEVQD+ L+DV P+S
Sbjct: 377 VLSG--AEEVQDMRLIDVIPMS 396
Score = 63.7 bits (148), Expect = 8e-11
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +3
Query: 18 VQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRAR 197
++EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++ L GIDF I+R
Sbjct: 239 LEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTD 298
Query: 198 FEELNADLFRSTMEPVEK 251
FE +L +T+ VE+
Sbjct: 299 FESWIENLLMATVIHVER 316
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 VFRDAKMDKAQIHDIVLVGGSTRIPKVQKLL-QDFFNGKELNXSINPDEXXXXXXXXXXX 427
V R+A + K+QI++IVLVGGSTRIP ++ ++ Q F + + SI+PDE
Sbjct: 317 VIREANLKKSQINEIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAA 376
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L G +EEVQD+ L+DV P+S
Sbjct: 377 VLSG--AEEVQDMRLIDVIPMS 396
Score = 63.7 bits (148), Expect = 8e-11
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +3
Query: 18 VQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRAR 197
++EFK ++ DL N RAL+R+R A E AK TLS+S+ A IE++ L GIDF I+R
Sbjct: 239 LEEFKNRHGIDLKGNYRALKRIRKAAEVAKITLSASSVARIELECLHLGIDFIMRISRTD 298
Query: 198 FEELNADLFRSTMEPVEK 251
FE +L +T+ VE+
Sbjct: 299 FESWIENLLMATVIHVER 316
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXX 427
+ DA++ +QI D++LVGG +R+PKVQ +Q+ F GK + ++NPDE
Sbjct: 347 KALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGA 405
Query: 428 ILHGDKSEEVQDLLLLDVTPLS 493
+L GD V D+LLLDVTPLS
Sbjct: 406 VLAGD----VTDVLLLDVTPLS 423
Score = 60.9 bits (141), Expect = 6e-10
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID---- 170
+V+H V EFK++ DL + +A++RLR A E+AK LSS+TQ I + +
Sbjct: 261 LVHHLVGEFKKEQGVDLTKDPQAMQRLREAAEKAKCELSSTTQTDINLPYITMDQSGPKH 320
Query: 171 FYTSITRARFEELNADLFRSTMEPVEKS 254
+TRA+FE++ DL + T+EP K+
Sbjct: 321 LNLKLTRAKFEQIVGDLIKRTIEPCRKA 348
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 320 IPKVQKLLQDFFNGKELNXSINPDEXXXXXXXXXXXILHGDKSEEVQDLLLLDVTPLS 493
IPKVQ+L++D+FNGKE + INPDE ++ G E D++LLDV PL+
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLT 56
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 51.6 bits (118), Expect = 4e-07
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHFVQEFKRKYKKD--LATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 182
+H ++ F++ YK + TN+RA+ + ER K+ LS++ + +I+S E ID
Sbjct: 272 DHLIEMFEKNYKPKTKVNTNRRAMTKFSKEAERLKQVLSANAEHFAQIESAHEDIDAKLK 331
Query: 183 ITRARFEELNADLFRSTMEPVEKS 254
+TR F L +D+ EP+E++
Sbjct: 332 VTREDFNHLISDMESRFGEPIEQA 355
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 248 EVFRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
+ R A++ I VL+G TR+PKVQ+++Q KE+ +N DE
Sbjct: 354 QALRMAQIPIDDIDQFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/116 (26%), Positives = 55/116 (47%)
Frame = +3
Query: 36 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 215
K KD++TN RA+ +L ER K+ LS++ +++SLFE +F +TR E++
Sbjct: 270 KTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIE 329
Query: 216 DLFRSTMEPVEKSSVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLMERSSTNLL 383
DL P+ + M + ++ A P+ + K L ++ +N L
Sbjct: 330 DLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 385
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 263 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 346 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 50.8 bits (116), Expect = 6e-07
Identities = 31/116 (26%), Positives = 55/116 (47%)
Frame = +3
Query: 36 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 215
K KD++TN RA+ +L ER K+ LS++ +++SLFE +F +TR E++
Sbjct: 286 KTSKDISTNARAIGKLHKEAERVKQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIE 345
Query: 216 DLFRSTMEPVEKSSVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLMERSSTNLL 383
DL P+ + M + ++ A P+ + K L ++ +N L
Sbjct: 346 DLEPRIAAPILDAIGMAQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFL 401
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 263 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
A++ I +VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 362 AQISTNDIDLVVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 12 HFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSS-TQASIEIDSLFEGIDFYTSIT 188
HF +EFK KY D AT+ R RL CER K+ +S++ T + I+ E D +
Sbjct: 245 HFRKEFKTKYGIDAATSPRPWLRLLDECERVKKQMSANQTPIPLNIECFMEDKDVTGKMQ 304
Query: 189 RARFEELNADLF 224
R FE+L A +F
Sbjct: 305 RQEFEDLAAPIF 316
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +2
Query: 281 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPDE 394
+I +I +VGGS+RIP ++++++D F GKE ++N DE
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDE 373
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +2
Query: 260 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNXSINPD 391
DA +D A + +IVLVGGST++P V+K++ FF K N ++P+
Sbjct: 355 DANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPE 397
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +3
Query: 12 HFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 191
H + + K+ K + NK ++++R E+ K L++ +I ++ G Y +TR
Sbjct: 274 HLISKIAEKFGKTI-DNKEDIQQIRMEVEKGKIRLTNVPSTTISLNLKTVGKWNY-ELTR 331
Query: 192 ARFEELNADLFRSTMEPV 245
FE LN DL ++ P+
Sbjct: 332 DEFETLNGDLLKAIELPI 349
>Z82287-4|CAB05314.1| 433|Caenorhabditis elegans Hypothetical
protein ZK550.4 protein.
Length = 433
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 192 ARFEELNADLFRSTMEPVEKSSVMPRWIR 278
A F +LNAD+ + PVE++ +MP W++
Sbjct: 272 AVFVDLNADINKG---PVEEAKIMPEWLK 297
>Y08816-1|CAA70050.2| 433|Caenorhabditis elegans TFIIE-alpha
protein protein.
Length = 433
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 192 ARFEELNADLFRSTMEPVEKSSVMPRWIR 278
A F +LNAD+ + PVE++ +MP W++
Sbjct: 272 AVFVDLNADINKG---PVEEAKIMPEWLK 297
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform e protein.
Length = 2702
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 39 YKKDLATN-KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 215
Y +D+A + A R+ ER + L IEI SL+EGI+ T + L
Sbjct: 722 YARDIAVSASTAARKKAIPTERTSQKLKEVGADGIEILSLWEGIETDLDATTQLVDLLRV 781
Query: 216 DLFRSTMEPVEKSSVMPR 269
+S+++ +E S + R
Sbjct: 782 ---KSSLQTIESSEEVER 796
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 39 YKKDLATN-KRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 215
Y +D+A + A R+ ER + L IEI SL+EGI+ T + L
Sbjct: 5568 YARDIAVSASTAARKKAIPTERTSQKLKEVGADGIEILSLWEGIETDLDATTQLVDLLRV 5627
Query: 216 DLFRSTMEPVEKSSVMPR 269
+S+++ +E S + R
Sbjct: 5628 ---KSSLQTIESSEEVER 5642
>U39742-5|AAK39199.1| 767|Caenorhabditis elegans Hypothetical
protein C25F6.4 protein.
Length = 767
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 147 DSLFEGIDFYTSITRARFEELNADL-FRSTMEPVEKSSVMPRWI 275
DS+FE YT R+ A+ FRS P EK+ + WI
Sbjct: 204 DSMFEDSQIYTESGIKRYGSWPANRRFRSAASPFEKNQMNNSWI 247
>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical
protein T19A5.1 protein.
Length = 1280
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 249 KSSVMPRWIRLKSTILYWWVA--PLVSPRCRSSCKISLMERSSTNLLTLTRP*LMVQLSR 422
K ++ PRW+ L LYW + P + +C + E S +++ L + +M++ +R
Sbjct: 701 KHTIGPRWVSLNLAGLYWRIQGNPHQATKCLLGAFLDKPEESFVSIVQLAQ--VMLKSTR 758
Query: 423 LLS 431
+++
Sbjct: 759 MVN 761
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/47 (23%), Positives = 21/47 (44%)
Frame = +3
Query: 30 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID 170
K +Y K L N++ ++ + CE A++ E D F ++
Sbjct: 1637 KEEYNKQLKKNQQIIKEYQIECEEARQAKEDIAALLREADRKFRAVE 1683
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,517,239
Number of Sequences: 27780
Number of extensions: 241517
Number of successful extensions: 698
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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