Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00052
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 77 8e-15
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 77 8e-15
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 77 8e-15
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 77 8e-15
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 77 8e-15
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 66 2e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 66 2e-11
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 48 4e-06
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 38 0.003
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.32
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.7
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 1.7
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 28 2.9
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 28 3.9
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 29.9 bits (64), Expect = 0.96
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAG 40
GIPP+QQRLIFAG
Sbjct: 491 GIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 491 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 567 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 643 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 719 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 795 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 491 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 567 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 643 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 719 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 795 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/91 (40%), Positives = 48/91 (52%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 181
GIP +QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRK 88
Query: 182 XXXXXLAVLRFYKVDENGKIHRLRPSAQASS 274
LAVL++YK+DENGKI RLR Q S
Sbjct: 89 PKKVKLAVLKYYKIDENGKITRLRKECQQPS 119
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 256 ECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 345
EC CG GVFMA +RHYCG+CH T+V
Sbjct: 114 ECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 65.7 bits (153), Expect = 2e-11
Identities = 37/91 (40%), Positives = 48/91 (52%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 181
GIP +QRL +AG+QLED SD I E+T+++ Y+TP
Sbjct: 33 GIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGGAKKRKKKVYTTPKKNKRK 88
Query: 182 XXXXXLAVLRFYKVDENGKIHRLRPSAQASS 274
LAVL++YK+DENGKI RLR Q S
Sbjct: 89 PKKVKLAVLKYYKIDENGKITRLRKECQQPS 119
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 256 ECTGEQCGAGVFMAVMEDRHYCGKCHSTMV 345
EC CG GVFMA +RHYCG+CH T+V
Sbjct: 114 ECQQPSCGGGVFMAQHANRHYCGRCHDTLV 143
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 52.0 bits (119), Expect = 2e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 35 GIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 47.6 bits (108), Expect = 4e-06
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 195 GVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 50 EDGRTLSDYNIQKESTLHL 106
+D RT+SDYNI+ STL L
Sbjct: 135 KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 5 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 100
IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 188 IPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 23 RLIFAGKQLEDGRTLSDYNIQKESTLHL 106
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 113 STPGGGWIPSGYCSPRGYVHLPAAFQQ 33
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 244 PSAAECTGEQCGAGVFMAVMEDRHYCGKCHS 336
P+ A C G CG G F + +YC +C S
Sbjct: 90 PAVAACLGGLCGQGFFCS---SNNYCCRCQS 117
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 23 RLIFAGKQLEDGRTLSDYNIQKESTLHL 106
R++ GK LED +L+ YNIQ+ + + L
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 26 LIFAGKQLEDGRTLSDYNIQKESTLHL 106
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 209 RFYKVDENGKIHRL 250
+++K+DENGKI RL
Sbjct: 111 KYFKIDENGKISRL 124
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 209 RFYKVDENGKIHRL 250
+++K+DENGKI RL
Sbjct: 99 KYFKIDENGKISRL 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,876,254
Number of Sequences: 27780
Number of extensions: 177213
Number of successful extensions: 567
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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